BLASTX nr result

ID: Cimicifuga21_contig00016881 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00016881
         (318 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003519622.1| PREDICTED: ABC transporter C family member 3...   167   8e-40
ref|XP_003518544.1| PREDICTED: ABC transporter C family member 3...   167   8e-40
ref|XP_002533032.1| multidrug resistance-associated protein 2, 6...   167   8e-40
ref|XP_003545103.1| PREDICTED: ABC transporter C family member 3...   166   2e-39
ref|XP_003617730.1| Multidrug resistance protein ABC transporter...   165   4e-39

>ref|XP_003519622.1| PREDICTED: ABC transporter C family member 3-like [Glycine max]
          Length = 1493

 Score =  167 bits (423), Expect = 8e-40
 Identities = 78/104 (75%), Positives = 90/104 (86%)
 Frame = +3

Query: 6    VYWTYITTAYRGALAPVVLMAQVLFQILQIGSSYWMTWATPVSKDVKPPVEGSTLISVYT 185
            VYW  ITTAY GAL P +L+AQ+LFQ LQIGS+YWM WATP+S+DV+PPVEG+TLI+VY 
Sbjct: 910  VYWKCITTAYGGALVPFILLAQILFQALQIGSNYWMVWATPISEDVQPPVEGTTLIAVYV 969

Query: 186  ALAMGSSIFVLVRAVLLVIAGYKTATILFNKMHKCIFRAPMSFF 317
             LA+GSS  +L RA+LLV AGYKTATILFNKMH CIFRAPMSFF
Sbjct: 970  GLAIGSSFCILARAILLVTAGYKTATILFNKMHFCIFRAPMSFF 1013


>ref|XP_003518544.1| PREDICTED: ABC transporter C family member 3-like [Glycine max]
          Length = 2054

 Score =  167 bits (423), Expect = 8e-40
 Identities = 78/104 (75%), Positives = 90/104 (86%)
 Frame = +3

Query: 6    VYWTYITTAYRGALAPVVLMAQVLFQILQIGSSYWMTWATPVSKDVKPPVEGSTLISVYT 185
            VYW  ITTAY GAL P +L+AQ+LFQ LQIGS+YWM WATP+S+DV+PPVEG+TLI+VY 
Sbjct: 1471 VYWKCITTAYGGALVPFILLAQILFQALQIGSNYWMAWATPISEDVQPPVEGTTLIAVYV 1530

Query: 186  ALAMGSSIFVLVRAVLLVIAGYKTATILFNKMHKCIFRAPMSFF 317
             LA+GSS  +L RA+LLV AGYKTATILFNKMH CIFRAPMSFF
Sbjct: 1531 GLAIGSSFCILARAILLVTAGYKTATILFNKMHFCIFRAPMSFF 1574


>ref|XP_002533032.1| multidrug resistance-associated protein 2, 6 (mrp2, 6),
            abc-transoprter, putative [Ricinus communis]
            gi|223527170|gb|EEF29340.1| multidrug
            resistance-associated protein 2, 6 (mrp2, 6),
            abc-transoprter, putative [Ricinus communis]
          Length = 1233

 Score =  167 bits (423), Expect = 8e-40
 Identities = 78/104 (75%), Positives = 88/104 (84%)
 Frame = +3

Query: 6    VYWTYITTAYRGALAPVVLMAQVLFQILQIGSSYWMTWATPVSKDVKPPVEGSTLISVYT 185
            VYW Y+TTAY GAL P +L+AQ+LFQ+LQIGS+YWM WATPVSKD KP V GSTLI VY 
Sbjct: 738  VYWKYLTTAYGGALVPFILLAQILFQVLQIGSNYWMAWATPVSKDAKPAVSGSTLIIVYV 797

Query: 186  ALAMGSSIFVLVRAVLLVIAGYKTATILFNKMHKCIFRAPMSFF 317
            ALA+GSS  +L R+ LLV AGYKTAT+LFNKMH CIFRAPMSFF
Sbjct: 798  ALAIGSSFCILARSTLLVTAGYKTATLLFNKMHLCIFRAPMSFF 841


>ref|XP_003545103.1| PREDICTED: ABC transporter C family member 3-like [Glycine max]
          Length = 1494

 Score =  166 bits (420), Expect = 2e-39
 Identities = 78/104 (75%), Positives = 89/104 (85%)
 Frame = +3

Query: 6    VYWTYITTAYRGALAPVVLMAQVLFQILQIGSSYWMTWATPVSKDVKPPVEGSTLISVYT 185
            VYW  ITTAY GAL P +L+AQ+LFQ LQIGS+YWM WATP+S DV+PPVEG+TLI+VY 
Sbjct: 911  VYWKCITTAYGGALVPFILLAQILFQALQIGSNYWMAWATPISSDVEPPVEGTTLIAVYV 970

Query: 186  ALAMGSSIFVLVRAVLLVIAGYKTATILFNKMHKCIFRAPMSFF 317
             LA+GSS  +L RA+LLV AGYKTATILFNKMH CIFRAPMSFF
Sbjct: 971  GLAIGSSFCILARAMLLVTAGYKTATILFNKMHFCIFRAPMSFF 1014


>ref|XP_003617730.1| Multidrug resistance protein ABC transporter family [Medicago
            truncatula] gi|355519065|gb|AET00689.1| Multidrug
            resistance protein ABC transporter family [Medicago
            truncatula]
          Length = 1521

 Score =  165 bits (417), Expect = 4e-39
 Identities = 76/104 (73%), Positives = 88/104 (84%)
 Frame = +3

Query: 6    VYWTYITTAYRGALAPVVLMAQVLFQILQIGSSYWMTWATPVSKDVKPPVEGSTLISVYT 185
            VYW YITTAY G+L P +L AQ+LFQ LQIGS+YWM WATP+S +V+PPVEG+TLI VY 
Sbjct: 943  VYWKYITTAYGGSLVPFILFAQILFQALQIGSNYWMAWATPISAEVEPPVEGTTLIEVYV 1002

Query: 186  ALAMGSSIFVLVRAVLLVIAGYKTATILFNKMHKCIFRAPMSFF 317
              A+GSS+ +LVRA+LLV  GYKTATILFNKMH CIFRAPMSFF
Sbjct: 1003 GFAIGSSLCILVRALLLVTVGYKTATILFNKMHLCIFRAPMSFF 1046


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