BLASTX nr result

ID: Cimicifuga21_contig00016880 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00016880
         (293 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002533032.1| multidrug resistance-associated protein 2, 6...   126   2e-27
ref|XP_002303920.1| multidrug resistance protein ABC transporter...   117   1e-24
ref|XP_003545103.1| PREDICTED: ABC transporter C family member 3...   116   2e-24
ref|XP_002300362.1| multidrug resistance protein ABC transporter...   116   2e-24
ref|XP_002265605.2| PREDICTED: ABC transporter C family member 3...   115   3e-24

>ref|XP_002533032.1| multidrug resistance-associated protein 2, 6 (mrp2, 6),
           abc-transoprter, putative [Ricinus communis]
           gi|223527170|gb|EEF29340.1| multidrug
           resistance-associated protein 2, 6 (mrp2, 6),
           abc-transoprter, putative [Ricinus communis]
          Length = 1233

 Score =  126 bits (317), Expect = 2e-27
 Identities = 63/92 (68%), Positives = 75/92 (81%), Gaps = 1/92 (1%)
 Frame = +1

Query: 19  EENDSTEYGKLVKLKEERKIEGDNK-DEIIEPKSQLVQEEEREKGKVGFHVYWEYITTAY 195
           ++N S+  G  V LKEE K   + K DEI+EPK QLVQEEEREKG+VGF VYW+Y+TTAY
Sbjct: 690 KDNMSSTNG--VPLKEENKDSQNGKMDEIVEPKGQLVQEEEREKGRVGFPVYWKYLTTAY 747

Query: 196 RGALAPFVLVAQILFQILQIGSSYWMTWATPV 291
            GAL PF+L+AQILFQ+LQIGS+YWM WATPV
Sbjct: 748 GGALVPFILLAQILFQVLQIGSNYWMAWATPV 779


>ref|XP_002303920.1| multidrug resistance protein ABC transporter family [Populus
            trichocarpa] gi|222841352|gb|EEE78899.1| multidrug
            resistance protein ABC transporter family [Populus
            trichocarpa]
          Length = 1305

 Score =  117 bits (293), Expect = 1e-24
 Identities = 50/66 (75%), Positives = 61/66 (92%)
 Frame = +1

Query: 94   DEIIEPKSQLVQEEEREKGKVGFHVYWEYITTAYRGALAPFVLVAQILFQILQIGSSYWM 273
            DE+ EP++QL+QEEEREKG+VGF +YW+YITTAY GAL PF+L+AQ+LFQILQIGS+YWM
Sbjct: 823  DEVAEPQAQLIQEEEREKGRVGFQIYWKYITTAYGGALVPFILLAQLLFQILQIGSTYWM 882

Query: 274  TWATPV 291
             WATPV
Sbjct: 883  AWATPV 888


>ref|XP_003545103.1| PREDICTED: ABC transporter C family member 3-like [Glycine max]
          Length = 1494

 Score =  116 bits (291), Expect = 2e-24
 Identities = 62/97 (63%), Positives = 71/97 (73%), Gaps = 1/97 (1%)
 Frame = +1

Query: 4    NVKNIEENDSTEYGKLVKLKEERKIEGDNK-DEIIEPKSQLVQEEEREKGKVGFHVYWEY 180
            N    + N S  YG   K KE RK E + K D+  EP+ QLVQEEEREKGKVGF VYW+ 
Sbjct: 858  NALEQDVNVSGTYG--FKEKEARKDEQNGKTDKKSEPQGQLVQEEEREKGKVGFSVYWKC 915

Query: 181  ITTAYRGALAPFVLVAQILFQILQIGSSYWMTWATPV 291
            ITTAY GAL PF+L+AQILFQ LQIGS+YWM WATP+
Sbjct: 916  ITTAYGGALVPFILLAQILFQALQIGSNYWMAWATPI 952


>ref|XP_002300362.1| multidrug resistance protein ABC transporter family [Populus
            trichocarpa] gi|222847620|gb|EEE85167.1| multidrug
            resistance protein ABC transporter family [Populus
            trichocarpa]
          Length = 1488

 Score =  116 bits (291), Expect = 2e-24
 Identities = 58/98 (59%), Positives = 73/98 (74%), Gaps = 1/98 (1%)
 Frame = +1

Query: 1    ENVKNIEENDSTEYGKLVKLKEERKIEGDNKDEIIE-PKSQLVQEEEREKGKVGFHVYWE 177
            EN    +EN S   G  +  KE  K   + K++++  PK+QL+QEEEREKG VGF +YW+
Sbjct: 855  ENESAGKENSS---GDRILQKEGNKDSQNGKEDVVAGPKAQLIQEEEREKGSVGFPIYWK 911

Query: 178  YITTAYRGALAPFVLVAQILFQILQIGSSYWMTWATPV 291
            +ITTAY GAL PF+L+AQILFQILQIGS+YWM WATPV
Sbjct: 912  FITTAYGGALVPFILLAQILFQILQIGSNYWMAWATPV 949


>ref|XP_002265605.2| PREDICTED: ABC transporter C family member 3-like [Vitis vinifera]
          Length = 1485

 Score =  115 bits (289), Expect = 3e-24
 Identities = 55/88 (62%), Positives = 68/88 (77%)
 Frame = +1

Query: 28   DSTEYGKLVKLKEERKIEGDNKDEIIEPKSQLVQEEEREKGKVGFHVYWEYITTAYRGAL 207
            D+    ++V  +E R  +  N +    PK+QLVQEEEREKGKVGF VYW+YITTAY GAL
Sbjct: 863  DTGSTSEVVPKEENRNGQTGNIEGTDGPKAQLVQEEEREKGKVGFSVYWKYITTAYGGAL 922

Query: 208  APFVLVAQILFQILQIGSSYWMTWATPV 291
             PF+L++QILFQ+LQIGS+YWM WATPV
Sbjct: 923  VPFILLSQILFQLLQIGSNYWMAWATPV 950