BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00016873
         (1784 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI19401.3| unnamed protein product [Vitis vinifera]              674   0.0  
ref|XP_002510095.1| WD-repeat protein, putative [Ricinus communi...   653   0.0  
ref|XP_002320030.1| predicted protein [Populus trichocarpa] gi|2...   640   0.0  
ref|XP_004142893.1| PREDICTED: DNA excision repair protein ERCC-...   633   e-179
ref|XP_003524008.1| PREDICTED: DNA excision repair protein ERCC-...   627   e-177

>emb|CBI19401.3| unnamed protein product [Vitis vinifera]
          Length = 458

 Score =  674 bits (1738), Expect = 0.0
 Identities = 332/445 (74%), Positives = 370/445 (83%), Gaps = 5/445 (1%)
 Frame = -2

Query: 1666 MWEEVGHREVGRLRPYSFANRIKSNRIASLQLSNYKEIASAHRGAINSLQVDLTDGRYLL 1487
            MW+++G RE G+LRPYSF+NRI S+RIASLQLSNYKEI S HRGA+NSLQVDLT+GRYLL
Sbjct: 1    MWKDLGDREAGKLRPYSFSNRITSDRIASLQLSNYKEIVSPHRGAVNSLQVDLTEGRYLL 60

Query: 1486 SGASDGSAAVYDVQCAARYEGGGLVAKHECIFVVDKQHEHGHKYAVSSAIWYPIDTGLFI 1307
            SGASD SAAVYD+Q A  YEGG LVAKH+ IFVVDKQHEHGHKYA+SSAIWYPIDTGLFI
Sbjct: 61   SGASDASAAVYDIQRATEYEGGSLVAKHKSIFVVDKQHEHGHKYAISSAIWYPIDTGLFI 120

Query: 1306 TGSFDHYVNVWDTNTTQVVMNFKMPGKVYRTAMSSVARSHMLIATGTEDVQVRLCDIASG 1127
            TGS+DHY+NVWDTNTTQVV+NFKMPGK+YRTAMSS+A +HMLIA GTEDVQVRLCDIASG
Sbjct: 121  TGSYDHYINVWDTNTTQVVVNFKMPGKIYRTAMSSLATAHMLIAAGTEDVQVRLCDIASG 180

Query: 1126 AFTHTLSGHRDGVMTVEWSNSSEWVLVTGGCDGAIRFWDIRRAGCFLVLDQSRTQLGXXX 947
            AF HTLSGHRDGVMTVEWS SSEWVLVTGGCDGAIRFWDIRRAGCFLVLDQS++QLG   
Sbjct: 181  AFAHTLSGHRDGVMTVEWSTSSEWVLVTGGCDGAIRFWDIRRAGCFLVLDQSQSQLGRRP 240

Query: 946  XXXXXPSL-KGXXXXXXXXXXXXXVKARTPQKKAAYGNGTKHVPTLR----SKGSMGQRL 782
                  +  K              V++R PQ+K AYGNG+K   T R    +KG + QRL
Sbjct: 241  PLLECSTANKAPMSKSFPASQSVNVRSRAPQRKFAYGNGSKQSATGRTSSQAKGLVRQRL 300

Query: 781  HPGMLSSHDRATAHYGAVTGLKVSEDGMYLLSAGSDSRLRLWDIESGCNTLVNFETTRLQ 602
            HPGMLSS DRAT+HYGAVTGLKV++DGMYLLSAGSDSRLRLWDI SGCNTLVNFET RLQ
Sbjct: 301  HPGMLSSQDRATSHYGAVTGLKVTDDGMYLLSAGSDSRLRLWDIMSGCNTLVNFETVRLQ 360

Query: 601  TRKGIQLAVTQDSSLVFVPCMTVVKAFDIWSGRTFLTFQGHYENVNSCCFSSHDQELYTG 422
            T K +QLA+T DS+LVFVPCMT VKAFD+WSG+T +TF+GHYE VN C  S  DQELYTG
Sbjct: 361  TSKAMQLAITNDSALVFVPCMTAVKAFDVWSGKTAMTFRGHYEYVNCCWLSLQDQELYTG 420

Query: 421  GNDRQILVWSPAKTVHAEADERGGE 347
            GNDRQILVWSP++    E D    E
Sbjct: 421  GNDRQILVWSPSRLNFDEMDHGSRE 445


>ref|XP_002510095.1| WD-repeat protein, putative [Ricinus communis]
            gi|223550796|gb|EEF52282.1| WD-repeat protein, putative
            [Ricinus communis]
          Length = 479

 Score =  653 bits (1685), Expect = 0.0
 Identities = 318/440 (72%), Positives = 357/440 (81%), Gaps = 2/440 (0%)
 Frame = -2

Query: 1681 EDALEMWEEVGHREVGRLRPYSFANRIKSNRIASLQLSNYKEIASAHRGAINSLQVDLTD 1502
            +DA +MW E+  RE G+ RP SF NR+KSNRIA+LQLSNYKEI S HRGAINSLQVDLT+
Sbjct: 28   KDASKMWREIRDRESGKTRPNSFTNRVKSNRIANLQLSNYKEIVSPHRGAINSLQVDLTE 87

Query: 1501 GRYLLSGASDGSAAVYDVQCAARYEGGGLVAKHECIFVVDKQHEHGHKYAVSSAIWYPID 1322
            GRYL+SGASD SAAV+DVQ A  +E  G++AKH+C+F+VDKQHE  HKYAVSSA WYP+D
Sbjct: 88   GRYLISGASDASAAVFDVQRATDFEDEGVIAKHKCLFIVDKQHETAHKYAVSSATWYPVD 147

Query: 1321 TGLFITGSFDHYVNVWDTNTTQVVMNFKMPGKVYRTAMSSVARSHMLIATGTEDVQVRLC 1142
            TGLF+TGS+DHY+ VWDTNTTQVV+NFK+PGKVYRTAMS +A SHMLIA GTEDVQVRLC
Sbjct: 148  TGLFVTGSYDHYIKVWDTNTTQVVVNFKLPGKVYRTAMSPLATSHMLIAAGTEDVQVRLC 207

Query: 1141 DIASGAFTHTLSGHRDGVMTVEWSNSSEWVLVTGGCDGAIRFWDIRRAGCFLVLDQSRTQ 962
            DIASGAF HTLSGHRDGVMTVEWS SSEWVLVTGGCDGAIRFWDIRRAGCF VLDQS++Q
Sbjct: 208  DIASGAFAHTLSGHRDGVMTVEWSTSSEWVLVTGGCDGAIRFWDIRRAGCFRVLDQSQSQ 267

Query: 961  LGXXXXXXXXPSLKGXXXXXXXXXXXXXVKARTPQKKAAYGNGTKHVPTLRS--KGSMGQ 788
            LG                           K+R P KK+A GNG K  P  R+  KG + Q
Sbjct: 268  LGRRPPVLPRSVANKVSSRSLLAGQHLSSKSRAPLKKSATGNGKKQSPLGRTPVKGPVRQ 327

Query: 787  RLHPGMLSSHDRATAHYGAVTGLKVSEDGMYLLSAGSDSRLRLWDIESGCNTLVNFETTR 608
            RLHPGMLS  DRATAHYGAVTGLK++EDGMYLLSAGSDSR+RLWD+ESGCNTLVNFET R
Sbjct: 328  RLHPGMLSIQDRATAHYGAVTGLKITEDGMYLLSAGSDSRMRLWDLESGCNTLVNFETVR 387

Query: 607  LQTRKGIQLAVTQDSSLVFVPCMTVVKAFDIWSGRTFLTFQGHYENVNSCCFSSHDQELY 428
            LQT K IQLA TQDSSLVFVPCMT VKAFD+WSG T +TF+GHYE VN C +SS DQE+Y
Sbjct: 388  LQTSKAIQLATTQDSSLVFVPCMTAVKAFDLWSGMTSMTFRGHYEYVNCCWYSSQDQEIY 447

Query: 427  TGGNDRQILVWSPAKTVHAE 368
            TGGNDRQILVW P + +  E
Sbjct: 448  TGGNDRQILVWCPPRLIDME 467


>ref|XP_002320030.1| predicted protein [Populus trichocarpa] gi|222860803|gb|EEE98345.1|
            predicted protein [Populus trichocarpa]
          Length = 449

 Score =  640 bits (1651), Expect = 0.0
 Identities = 310/438 (70%), Positives = 361/438 (82%), Gaps = 5/438 (1%)
 Frame = -2

Query: 1666 MWEEVGHREVGRLRPYSFANRIKSNRIASLQLSNYKEIASAHRGAINSLQVDLTDGRYLL 1487
            MW E+  RE G+ RP SF NR+ S+RI++LQLSNYK++ S HRG+INSLQVDLT+GRYLL
Sbjct: 1    MWREIRDREAGKTRPNSFKNRVSSSRISNLQLSNYKDVVSPHRGSINSLQVDLTEGRYLL 60

Query: 1486 SGASDGSAAVYDVQCAARYEGGG---LVAKHECIFVVDKQHEHGHKYAVSSAIWYPIDTG 1316
            SGASD SA+V+D+Q A  +EGGG   L+AKH+ +  +DKQH++GHK+A+SSAIWYPIDTG
Sbjct: 61   SGASDASASVFDIQHATDFEGGGEGALIAKHKSLITIDKQHQNGHKFAISSAIWYPIDTG 120

Query: 1315 LFITGSFDHYVNVWDTNTTQVVMNFKMPGKVYRTAMSSVARSHMLIATGTEDVQVRLCDI 1136
            LF+TGS+DHY+ VWDTN+TQ+V+NFK+PGKVYRTAMS +A SHMLIA GTEDVQVRLCDI
Sbjct: 121  LFVTGSYDHYIKVWDTNSTQMVINFKLPGKVYRTAMSPLATSHMLIAAGTEDVQVRLCDI 180

Query: 1135 ASGAFTHTLSGHRDGVMTVEWSNSSEWVLVTGGCDGAIRFWDIRRAGCFLVLDQSRTQLG 956
            ASGAF HTLSGHRDGVMTVEWS SSEWVLVTGGCDGAIRFWDIRRAGCFLVLDQS++QLG
Sbjct: 181  ASGAFAHTLSGHRDGVMTVEWSTSSEWVLVTGGCDGAIRFWDIRRAGCFLVLDQSQSQLG 240

Query: 955  XXXXXXXXPSLKGXXXXXXXXXXXXXVKARTPQKKAAYGNGTKHVP--TLRSKGSMGQRL 782
                     ++                K R PQKK+  GNG KH P   + +KG + QRL
Sbjct: 241  RRPPVLARSAVS--TSKALSKGQNLLGKPRMPQKKSGGGNGIKHSPLGQVPAKGYLKQRL 298

Query: 781  HPGMLSSHDRATAHYGAVTGLKVSEDGMYLLSAGSDSRLRLWDIESGCNTLVNFETTRLQ 602
            HPGMLSS DRATAHYGAVTGLK++EDGMYLLSAGSDSR+RLWD+ESG NTLVNFET RLQ
Sbjct: 299  HPGMLSSQDRATAHYGAVTGLKITEDGMYLLSAGSDSRIRLWDVESGRNTLVNFETARLQ 358

Query: 601  TRKGIQLAVTQDSSLVFVPCMTVVKAFDIWSGRTFLTFQGHYENVNSCCFSSHDQELYTG 422
            T K IQLA  QDS+LVFVPCMT VKAFD+WSG+T++TF+GHYE+VN C FSS DQELYTG
Sbjct: 359  TSKPIQLATAQDSNLVFVPCMTSVKAFDVWSGKTYVTFRGHYEHVNCCWFSSQDQELYTG 418

Query: 421  GNDRQILVWSPAKTVHAE 368
            GNDRQILVWSPA+ +  E
Sbjct: 419  GNDRQILVWSPARLIPNE 436


>ref|XP_004142893.1| PREDICTED: DNA excision repair protein ERCC-8-like [Cucumis sativus]
            gi|449482714|ref|XP_004156381.1| PREDICTED: DNA excision
            repair protein ERCC-8-like [Cucumis sativus]
          Length = 446

 Score =  633 bits (1632), Expect = e-179
 Identities = 307/430 (71%), Positives = 354/430 (82%), Gaps = 2/430 (0%)
 Frame = -2

Query: 1666 MWEEVGHREVGRLRPYSFANRIKSNRIASLQLSNYKEIASAHRGAINSLQVDLTDGRYLL 1487
            MW+ +  RE G+LRP SFANR+KS+R +SLQLSN+K+I S HRG++NSLQVDLT+GRYLL
Sbjct: 1    MWKNIRDREAGKLRPNSFANRVKSDRTSSLQLSNHKDIVSPHRGSVNSLQVDLTEGRYLL 60

Query: 1486 SGASDGSAAVYDVQCAARYEGGGLVAKHECIFVVDKQHEHGHKYAVSSAIWYPIDTGLFI 1307
            SGASD SAAV+D+Q A   EG  L+AKH+CIF VDKQHEHGHKYA+SSAIWYP+DTGLF+
Sbjct: 61   SGASDASAAVFDIQRATHSEG--LIAKHQCIFAVDKQHEHGHKYAISSAIWYPVDTGLFV 118

Query: 1306 TGSFDHYVNVWDTNTTQVVMNFKMPGKVYRTAMSSVARSHMLIATGTEDVQVRLCDIASG 1127
            TGSFDH++NVWDTNTTQVV+NFK+PGKVYRTAMSS+A SHMLIA GTEDVQVRLCDI+SG
Sbjct: 119  TGSFDHHINVWDTNTTQVVVNFKLPGKVYRTAMSSLATSHMLIAAGTEDVQVRLCDISSG 178

Query: 1126 AFTHTLSGHRDGVMTVEWSNSSEWVLVTGGCDGAIRFWDIRRAGCFLVLDQSRTQLGXXX 947
            AF+HTLSGHRDGVM+VEWS SSEWVL+TGGCDGAIRFWDIRRAGCF VLDQS++QLG   
Sbjct: 179  AFSHTLSGHRDGVMSVEWSASSEWVLITGGCDGAIRFWDIRRAGCFRVLDQSQSQLGRRP 238

Query: 946  XXXXXPSLKGXXXXXXXXXXXXXVKARTPQKKAAYGNGTKHVPT--LRSKGSMGQRLHPG 773
                  + K              +K+R P KK   GN TK   T  L +KGS  QRLHPG
Sbjct: 239  PISGWTANKLSTSKSLLASQGSNMKSRIPHKKLTNGNATKPSSTGKLPAKGSTRQRLHPG 298

Query: 772  MLSSHDRATAHYGAVTGLKVSEDGMYLLSAGSDSRLRLWDIESGCNTLVNFETTRLQTRK 593
            +LS  DRA +HYGAVTGLKV+ DGMYLLSAGSDSRL+LWD+ESGCNTLVNFET RLQT K
Sbjct: 299  LLSGQDRAVSHYGAVTGLKVTGDGMYLLSAGSDSRLKLWDVESGCNTLVNFETIRLQTNK 358

Query: 592  GIQLAVTQDSSLVFVPCMTVVKAFDIWSGRTFLTFQGHYENVNSCCFSSHDQELYTGGND 413
             +QLA +QDSSLVF PCM  VKAFD+W+G+T LTF GHYE VN C ++  DQELYTGGND
Sbjct: 359  PLQLATSQDSSLVFAPCMATVKAFDMWTGKTSLTFSGHYEGVNCCWYNFPDQELYTGGND 418

Query: 412  RQILVWSPAK 383
            RQILVWSP++
Sbjct: 419  RQILVWSPSQ 428


>ref|XP_003524008.1| PREDICTED: DNA excision repair protein ERCC-8-like [Glycine max]
          Length = 460

 Score =  627 bits (1616), Expect = e-177
 Identities = 313/445 (70%), Positives = 352/445 (79%), Gaps = 6/445 (1%)
 Frame = -2

Query: 1666 MWEEVGHREVGRLRPYSFANRIKSNRIASLQLSNYKEIASAHRGAINSLQVDLTDGRYLL 1487
            +W+ +  RE G+LR   FANRIKSNRI+ LQLSN+K+I S H+GAINSLQVD T+GRYLL
Sbjct: 9    VWKRIRDREAGKLRANHFANRIKSNRISQLQLSNHKDIVSPHKGAINSLQVDSTEGRYLL 68

Query: 1486 SGASDGSAAVYDVQCAARYE----GGGLVAKHECIFVVDKQHEHGHKYAVSSAIWYPIDT 1319
            S ASD S AVYDVQ    YE    GGG ++KH  IFVVDKQH+ GHKYAVS+AIWYPIDT
Sbjct: 69   SAASDASVAVYDVQRPTVYEAGGGGGGGISKHSSIFVVDKQHQQGHKYAVSTAIWYPIDT 128

Query: 1318 GLFITGSFDHYVNVWDTNTTQVVMNFKMPGKVYRTAMSSVARSHMLIATGTEDVQVRLCD 1139
            GLF+TGS+DH++NVWDTNTTQVV+NFKMPGKV+R AMS+++ SHMLIA  TEDVQVRLCD
Sbjct: 129  GLFVTGSYDHHINVWDTNTTQVVVNFKMPGKVHRAAMSNLSTSHMLIAAATEDVQVRLCD 188

Query: 1138 IASGAFTHTLSGHRDGVMTVEWSNSSEWVLVTGGCDGAIRFWDIRRAGCFLVLDQSRTQL 959
            IASGAF HTLSGHRDGVMTVEWSNSSEWVLVTGGCDGAIRFWDIRRAGCF VLDQS+TQL
Sbjct: 189  IASGAFAHTLSGHRDGVMTVEWSNSSEWVLVTGGCDGAIRFWDIRRAGCFQVLDQSQTQL 248

Query: 958  GXXXXXXXXPSLKGXXXXXXXXXXXXXVKARTPQKKAAYGNGTKHVPTLR--SKGSMGQR 785
            G          +                K R  QKK A G+G++  P  R  SKG M QR
Sbjct: 249  GRRPPILKRSMITKVKSQSLYHSQDSSTKLRAAQKKHANGSGSRQQPIGRVPSKGPMKQR 308

Query: 784  LHPGMLSSHDRATAHYGAVTGLKVSEDGMYLLSAGSDSRLRLWDIESGCNTLVNFETTRL 605
            LHPGMLS+ DRATAHYGAVTGLK +EDGMYLLSAGSDSRLRLWD+ES CNTLVNFET RL
Sbjct: 309  LHPGMLSTQDRATAHYGAVTGLKATEDGMYLLSAGSDSRLRLWDVESSCNTLVNFETVRL 368

Query: 604  QTRKGIQLAVTQDSSLVFVPCMTVVKAFDIWSGRTFLTFQGHYENVNSCCFSSHDQELYT 425
            Q  K +QLA TQDS+LVFVPCM  VKAFD+WSG T+   +GHYE VNSC F+ HDQELYT
Sbjct: 369  QINKPLQLATTQDSALVFVPCMRSVKAFDMWSGNTYTILRGHYECVNSCWFNQHDQELYT 428

Query: 424  GGNDRQILVWSPAKTVHAEADERGG 350
            GGNDRQILVWSPA+++   ADE  G
Sbjct: 429  GGNDRQILVWSPARSI---ADEMEG 450