BLASTX nr result

ID: Cimicifuga21_contig00016872 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00016872
         (1224 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003634377.1| PREDICTED: uncharacterized protein LOC100259...   125   2e-26
ref|XP_002510491.1| conserved hypothetical protein [Ricinus comm...   120   9e-25
ref|XP_002306907.1| predicted protein [Populus trichocarpa] gi|2...   119   2e-24
gb|AFW89742.1| cell growth defect factor 2 [Zea mays]                 113   9e-23
ref|XP_003531249.1| PREDICTED: uncharacterized protein LOC100804...   113   9e-23

>ref|XP_003634377.1| PREDICTED: uncharacterized protein LOC100259103 isoform 2 [Vitis
           vinifera] gi|359492197|ref|XP_002280550.2| PREDICTED:
           uncharacterized protein LOC100259103 isoform 1 [Vitis
           vinifera] gi|302142607|emb|CBI19810.3| unnamed protein
           product [Vitis vinifera]
          Length = 116

 Score =  125 bits (314), Expect = 2e-26
 Identities = 69/118 (58%), Positives = 77/118 (65%)
 Frame = -1

Query: 870 MEGKIWKKRGYXXXXXXXXXXXXXXXXAKFFTSQFVKYGFIICFNVMMWGCYVNSLKALS 691
           MEGK  K RGY                AK F+SQ +KYG +I FNV MWGCYVNSLKALS
Sbjct: 1   MEGK--KSRGYAWAISAGVNAALAAISAKLFSSQVIKYGLVIIFNVTMWGCYVNSLKALS 58

Query: 690 SLQATVTNFATNXXXXXXXXXXXFNETISTQWFAGALLIVLGVFILSKSSVEKKARSD 517
           SLQATVTNFA N           F E +  QWFAGALLIV+GVFILSKSS+E+KA +D
Sbjct: 59  SLQATVTNFAANFLSSGLAGFFLFEEALPFQWFAGALLIVIGVFILSKSSIERKASTD 116


>ref|XP_002510491.1| conserved hypothetical protein [Ricinus communis]
           gi|223551192|gb|EEF52678.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 117

 Score =  120 bits (300), Expect = 9e-25
 Identities = 66/118 (55%), Positives = 77/118 (65%)
 Frame = -1

Query: 870 MEGKIWKKRGYXXXXXXXXXXXXXXXXAKFFTSQFVKYGFIICFNVMMWGCYVNSLKALS 691
           MEG I K++GY                AKF  +Q V+Y  ++ FNV MWGCYVNSL+ALS
Sbjct: 1   MEG-IKKRQGYGWAVSAGFNAALAAIAAKFIQNQLVRYSVVVLFNVTMWGCYVNSLRALS 59

Query: 690 SLQATVTNFATNXXXXXXXXXXXFNETISTQWFAGALLIVLGVFILSKSSVEKKARSD 517
           SLQATVTNFATN           FNET+S QWFAGALLIV+GV ILSKSS+E+K   D
Sbjct: 60  SLQATVTNFATNFISSGLAGYIMFNETLSAQWFAGALLIVVGVVILSKSSIEQKTSMD 117


>ref|XP_002306907.1| predicted protein [Populus trichocarpa] gi|222856356|gb|EEE93903.1|
           predicted protein [Populus trichocarpa]
          Length = 120

 Score =  119 bits (298), Expect = 2e-24
 Identities = 63/112 (56%), Positives = 72/112 (64%)
 Frame = -1

Query: 852 KKRGYXXXXXXXXXXXXXXXXAKFFTSQFVKYGFIICFNVMMWGCYVNSLKALSSLQATV 673
           K+ GY                AKFF+ Q +KYG ++ FNV MWGCYVNSLKALSSLQATV
Sbjct: 5   KRTGYVWAISAGLNAAFAAIAAKFFSYQVIKYGLVVLFNVTMWGCYVNSLKALSSLQATV 64

Query: 672 TNFATNXXXXXXXXXXXFNETISTQWFAGALLIVLGVFILSKSSVEKKARSD 517
           TNFA N           F ET+S QWFAGALLIV+GV ILSKSS+E+K   D
Sbjct: 65  TNFAANFLSSGLAGFFLFKETLSVQWFAGALLIVIGVVILSKSSIERKESID 116


>gb|AFW89742.1| cell growth defect factor 2 [Zea mays]
          Length = 114

 Score =  113 bits (283), Expect = 9e-23
 Identities = 56/90 (62%), Positives = 67/90 (74%)
 Frame = -1

Query: 786 KFFTSQFVKYGFIICFNVMMWGCYVNSLKALSSLQATVTNFATNXXXXXXXXXXXFNETI 607
           KFF++  +KYG +I FNV MWGCYVNSLKALSSLQATVTNFA N           F+E +
Sbjct: 25  KFFSTLLLKYGMVILFNVTMWGCYVNSLKALSSLQATVTNFAANFISSGLAGCFLFDEPL 84

Query: 606 STQWFAGALLIVLGVFILSKSSVEKKARSD 517
            ++WFAGA LI+ GVFILSKSS+E+K  SD
Sbjct: 85  PSKWFAGASLIIFGVFILSKSSIEEKQNSD 114


>ref|XP_003531249.1| PREDICTED: uncharacterized protein LOC100804964 isoform 1 [Glycine
           max]
          Length = 122

 Score =  113 bits (283), Expect = 9e-23
 Identities = 61/119 (51%), Positives = 75/119 (63%)
 Frame = -1

Query: 873 TMEGKIWKKRGYXXXXXXXXXXXXXXXXAKFFTSQFVKYGFIICFNVMMWGCYVNSLKAL 694
           +MEG   K++GY                 K    QFV+YG ++ FNV MW CYVNSLKAL
Sbjct: 6   SMEGG--KRKGYAWALSAGFNAALAAISVKLPLHQFVRYGMVLLFNVTMWACYVNSLKAL 63

Query: 693 SSLQATVTNFATNXXXXXXXXXXXFNETISTQWFAGALLIVLGVFILSKSSVEKKARSD 517
           SSLQATVTNFATN           F+E++S QWFAGA+LI++GV ILS SS+EKK  +D
Sbjct: 64  SSLQATVTNFATNFISSGLAGFFFFHESLSFQWFAGAILIIIGVVILSNSSIEKKVSTD 122


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