BLASTX nr result

ID: Cimicifuga21_contig00016870 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00016870
         (580 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002321052.1| predicted protein [Populus trichocarpa] gi|2...   169   4e-40
emb|CAN61399.1| hypothetical protein VITISV_031828 [Vitis vinifera]   163   2e-38
ref|XP_002263069.2| PREDICTED: uncharacterized protein LOC100245...   162   3e-38
ref|XP_002524795.1| conserved hypothetical protein [Ricinus comm...   155   5e-36
ref|XP_003632363.1| PREDICTED: uncharacterized protein LOC100254...   151   7e-35

>ref|XP_002321052.1| predicted protein [Populus trichocarpa] gi|222861825|gb|EEE99367.1|
            predicted protein [Populus trichocarpa]
          Length = 1752

 Score =  169 bits (427), Expect = 4e-40
 Identities = 99/198 (50%), Positives = 127/198 (64%), Gaps = 6/198 (3%)
 Frame = -3

Query: 578  SYMFSSQDFNYVSRYLEAEQIGAIVREQEKKAAWKTAQLLHIRNSEELRRQRNLQVEKMK 399
            SYMFSS +F+YV+RYLEAEQIGAIVREQEKKAAWKTAQLL+IR SEE +RQRNLQVEKMK
Sbjct: 927  SYMFSSNEFDYVARYLEAEQIGAIVREQEKKAAWKTAQLLYIRESEEKKRQRNLQVEKMK 986

Query: 398  SEMLNLQIQLQSINSRVNCGNIPPEKEGLRRRRHSS--VNYGTSFPDKEDIVRTKQEA-- 231
            SEMLNLQI L  +NS  NCG+  P+ +GLRRRR +S   +  +  P K +    K+E   
Sbjct: 987  SEMLNLQILLHGMNSTTNCGSSSPDSDGLRRRRSTSRITDRDSGSPGKGEGTLRKEEQII 1046

Query: 230  --ESLSTFEKRDXXXXXXXXXXXXXXXTMHTFNSLCEITELIEKASHNEISDLDXXXXXX 57
              +S+  FE  +                      LCEITE++++++ + +SD        
Sbjct: 1047 TDDSIFRFEVHEFPSWNAESLEIKVSPKYSAEPPLCEITEIMQESTDSLLSD---SGKKA 1103

Query: 56   XXXXXKSPLISAVQIIGD 3
                 ++PLISAVQ+IGD
Sbjct: 1104 KVQSKENPLISAVQLIGD 1121


>emb|CAN61399.1| hypothetical protein VITISV_031828 [Vitis vinifera]
          Length = 1844

 Score =  163 bits (413), Expect = 2e-38
 Identities = 98/194 (50%), Positives = 122/194 (62%), Gaps = 2/194 (1%)
 Frame = -3

Query: 578  SYMFSSQDFNYVSRYLEAEQIGAIVREQEKKAAWKTAQLLHIRNSEELRRQRNLQVEKMK 399
            SYMFSSQ+F+YVS+YLEAEQIGAIV +QEK+AAWKTAQLL IR SEE +R RNLQVEKMK
Sbjct: 886  SYMFSSQEFDYVSKYLEAEQIGAIVSQQEKRAAWKTAQLLLIRKSEEQKRHRNLQVEKMK 945

Query: 398  SEMLNLQIQLQSINSRVNCGNIPPEKEGLRRRRHSSVNYG--TSFPDKEDIVRTKQEAES 225
            SEMLNLQIQLQS+++  NCG   P  EGLRRR +SS++       PDK +    K+  +S
Sbjct: 946  SEMLNLQIQLQSMSTNSNCGKTSPRNEGLRRRWNSSLDSHRVDGNPDKGENELKKEGTDS 1005

Query: 224  LSTFEKRDXXXXXXXXXXXXXXXTMHTFNSLCEITELIEKASHNEISDLDXXXXXXXXXX 45
             S F   +                 H+ +SL EI EL EK +  +    D          
Sbjct: 1006 FSHFNTIESPERVRTGSPSAVESRKHSGDSLTEIIELKEKTTSYDFLYSD-QRDKAKSQG 1064

Query: 44   XKSPLISAVQIIGD 3
             ++P+ISAV +IGD
Sbjct: 1065 KENPIISAVHLIGD 1078


>ref|XP_002263069.2| PREDICTED: uncharacterized protein LOC100245172 [Vitis vinifera]
          Length = 2458

 Score =  162 bits (411), Expect = 3e-38
 Identities = 98/194 (50%), Positives = 122/194 (62%), Gaps = 2/194 (1%)
 Frame = -3

Query: 578  SYMFSSQDFNYVSRYLEAEQIGAIVREQEKKAAWKTAQLLHIRNSEELRRQRNLQVEKMK 399
            SYMFSSQ+F+YVS+YLEAEQIGAIV +QEK+AAWKTAQLL IR SEE +R RNLQVEKMK
Sbjct: 1325 SYMFSSQEFDYVSKYLEAEQIGAIVSQQEKRAAWKTAQLLLIRKSEEQKRHRNLQVEKMK 1384

Query: 398  SEMLNLQIQLQSINSRVNCGNIPPEKEGLRRRRHSSVNYG--TSFPDKEDIVRTKQEAES 225
            SEMLNLQIQLQS+++  NCG   P  EGLRRR +SS++       PDK +    K+  +S
Sbjct: 1385 SEMLNLQIQLQSMSTNSNCGKTSPRNEGLRRRWNSSLDSHRVDGNPDKGENELKKEGTDS 1444

Query: 224  LSTFEKRDXXXXXXXXXXXXXXXTMHTFNSLCEITELIEKASHNEISDLDXXXXXXXXXX 45
             S F   +                 H+ +SL EI EL EK +  +    D          
Sbjct: 1445 FSHFNTIESPERVRTGSPSAVESRKHSGDSLPEIIELKEKTTSYDFLYSD-QRDKAKSQG 1503

Query: 44   XKSPLISAVQIIGD 3
             ++P+ISAV +IGD
Sbjct: 1504 KENPIISAVHLIGD 1517


>ref|XP_002524795.1| conserved hypothetical protein [Ricinus communis]
            gi|223535979|gb|EEF37638.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 2254

 Score =  155 bits (392), Expect = 5e-36
 Identities = 80/117 (68%), Positives = 95/117 (81%), Gaps = 2/117 (1%)
 Frame = -3

Query: 578  SYMFSSQDFNYVSRYLEAEQIGAIVREQEKKAAWKTAQLLHIRNSEELRRQRNLQVEKMK 399
            SYMFSS +F+YVSRYLEAEQIGAIVREQEKKAAWKTAQL HIR SEE +RQRNLQVEKMK
Sbjct: 1174 SYMFSSNEFDYVSRYLEAEQIGAIVREQEKKAAWKTAQLQHIRESEEKKRQRNLQVEKMK 1233

Query: 398  SEMLNLQIQLQSINSRVNCGNIPPEKEGLRRRRHSSV--NYGTSFPDKEDIVRTKQE 234
            SEMLN+QIQL +INS   C +  P++EGLR+RR +S+    G++ P K+D    +QE
Sbjct: 1234 SEMLNIQIQLHTINSTTKCNDTSPDREGLRKRRSTSLTSKRGSASPIKDDGTLKEQE 1290


>ref|XP_003632363.1| PREDICTED: uncharacterized protein LOC100254568 [Vitis vinifera]
          Length = 2489

 Score =  151 bits (382), Expect = 7e-35
 Identities = 100/195 (51%), Positives = 118/195 (60%), Gaps = 3/195 (1%)
 Frame = -3

Query: 578  SYMFSSQDFNYVSRYLEAEQIGAIVREQEKKAAWKTAQLLHIRNSEELRRQRNLQVEKMK 399
            SYMFSS DF+ VSRYLEAEQIGAIV EQEKK+AWKTAQL HIR +EE +RQRNLQVEK+K
Sbjct: 1351 SYMFSSHDFDNVSRYLEAEQIGAIVHEQEKKSAWKTAQLKHIREAEESKRQRNLQVEKIK 1410

Query: 398  SEMLNLQIQLQSINSRVNCGNIPPEKEGLRRRRHS-SVNYGTSFPDK-EDIVRTKQEAES 225
            SEMLNLQ QL S+NS  N        EGLRRR  S + N  T  PDK E I+R ++++  
Sbjct: 1411 SEMLNLQTQLHSMNSNTNFDEASHCIEGLRRRSTSLNSNRDTGAPDKGEGILRKQEQSFC 1470

Query: 224  LSTFEKRDXXXXXXXXXXXXXXXTMHTFN-SLCEITELIEKASHNEISDLDXXXXXXXXX 48
                   D               T H    SL EITEL E ++   + D +         
Sbjct: 1471 TDLIFPSDLHDFPATESPSAIKNTEHPMEYSLSEITELGEDSADGALVDSE-KREKVKSQ 1529

Query: 47   XXKSPLISAVQIIGD 3
              +SPLISAVQ+IGD
Sbjct: 1530 VKESPLISAVQLIGD 1544


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