BLASTX nr result

ID: Cimicifuga21_contig00016818 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00016818
         (417 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002276726.1| PREDICTED: regulation of nuclear pre-mRNA do...    55   4e-06
ref|XP_002528993.1| conserved hypothetical protein [Ricinus comm...    55   6e-06

>ref|XP_002276726.1| PREDICTED: regulation of nuclear pre-mRNA domain-containing protein
           2-like [Vitis vinifera]
          Length = 524

 Score = 55.5 bits (132), Expect = 4e-06
 Identities = 23/33 (69%), Positives = 27/33 (81%)
 Frame = +3

Query: 51  QSIQMIQQPPAPPSFRPLQPPGMLYYTHPHHNQ 149
           Q + + QQPPAPPSFRPLQ PGM+YY  PHH+Q
Sbjct: 492 QPMPLTQQPPAPPSFRPLQLPGMVYYGLPHHSQ 524


>ref|XP_002528993.1| conserved hypothetical protein [Ricinus communis]
           gi|223531583|gb|EEF33412.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 514

 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 22/33 (66%), Positives = 26/33 (78%)
 Frame = +3

Query: 48  QQSIQMIQQPPAPPSFRPLQPPGMLYYTHPHHN 146
           QQ + + QQ P PPSFRPLQPPGM+YY HP H+
Sbjct: 482 QQPMPLTQQAPGPPSFRPLQPPGMVYYGHPPHS 514


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