BLASTX nr result

ID: Cimicifuga21_contig00016785 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00016785
         (377 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ADL36690.1| GATA domain class transcription factor [Malus x d...   168   5e-40
ref|XP_003603626.1| GATA transcription factor [Medicago truncatu...   166   2e-39
emb|CBI36080.3| unnamed protein product [Vitis vinifera]              165   3e-39
ref|XP_002284028.1| PREDICTED: GATA transcription factor 9 [Viti...   165   3e-39
ref|XP_002308598.1| predicted protein [Populus trichocarpa] gi|2...   164   9e-39

>gb|ADL36690.1| GATA domain class transcription factor [Malus x domestica]
          Length = 375

 Score =  168 bits (425), Expect = 5e-40
 Identities = 89/142 (62%), Positives = 93/142 (65%), Gaps = 17/142 (11%)
 Frame = +1

Query: 1   VPGKARSKRSRLAPCNWXXXXXXXXXXXXXXXXXXXXXXXX--------GKKTYK----K 144
           VP KARSKRSR APCNW                                GKKT K    K
Sbjct: 183 VPAKARSKRSRAAPCNWTSRLLLLSTPEQSDVVVSAAEAASPLPPPSSTGKKTVKSAPKK 242

Query: 145 KELAEY-----GDGRKCLHCATDKTPQWRTGPLGPKTLCNACGVRYKSGRLVPEYRPASS 309
           KE  E      GDGRKC+HCATDKTPQWRTGP+GPKTLCNACGVRYKSGRLVPEYRPA+S
Sbjct: 243 KESQEGSGGGPGDGRKCMHCATDKTPQWRTGPMGPKTLCNACGVRYKSGRLVPEYRPAAS 302

Query: 310 PTFTLAKHSNSHRKVMELRRQK 375
           PTF L KHSNSHRKV+ELRRQK
Sbjct: 303 PTFVLTKHSNSHRKVLELRRQK 324


>ref|XP_003603626.1| GATA transcription factor [Medicago truncatula]
           gi|355492674|gb|AES73877.1| GATA transcription factor
           [Medicago truncatula]
          Length = 318

 Score =  166 bits (420), Expect = 2e-39
 Identities = 82/130 (63%), Positives = 90/130 (69%), Gaps = 5/130 (3%)
 Frame = +1

Query: 1   VPGKARSKRSRLAPCNWXXXXXXXXXXXXXXXXXXXXXXXXG-----KKTYKKKELAEYG 165
           VP KARSKRSR+ PCNW                              K + +K++  + G
Sbjct: 145 VPAKARSKRSRVPPCNWTSRLLVLSPTTTTTTTTTTSSHSDTMAPPKKPSPRKRDPNDGG 204

Query: 166 DGRKCLHCATDKTPQWRTGPLGPKTLCNACGVRYKSGRLVPEYRPASSPTFTLAKHSNSH 345
           +GRKCLHCATDKTPQWRTGPLGPKTLCNACGVRYKSGRLVPEYRPA+SPTF L KHSNSH
Sbjct: 205 EGRKCLHCATDKTPQWRTGPLGPKTLCNACGVRYKSGRLVPEYRPAASPTFVLTKHSNSH 264

Query: 346 RKVMELRRQK 375
           RKV ELRRQK
Sbjct: 265 RKVQELRRQK 274


>emb|CBI36080.3| unnamed protein product [Vitis vinifera]
          Length = 283

 Score =  165 bits (418), Expect = 3e-39
 Identities = 79/125 (63%), Positives = 86/125 (68%)
 Frame = +1

Query: 1   VPGKARSKRSRLAPCNWXXXXXXXXXXXXXXXXXXXXXXXXGKKTYKKKELAEYGDGRKC 180
           VPGKARSKR R  PC+W                           + KK+     GDGRKC
Sbjct: 120 VPGKARSKRPRSVPCDWSTRLLVLSPATSSSESDAFKKPPKTTSSKKKENSDSAGDGRKC 179

Query: 181 LHCATDKTPQWRTGPLGPKTLCNACGVRYKSGRLVPEYRPASSPTFTLAKHSNSHRKVME 360
           LHCA +KTPQWRTGP+GPKTLCNACGVR+KSGRLVPEYRPASSPTF  AKHSNSHRKV+E
Sbjct: 180 LHCAAEKTPQWRTGPMGPKTLCNACGVRFKSGRLVPEYRPASSPTFVSAKHSNSHRKVLE 239

Query: 361 LRRQK 375
           LRRQK
Sbjct: 240 LRRQK 244


>ref|XP_002284028.1| PREDICTED: GATA transcription factor 9 [Vitis vinifera]
          Length = 329

 Score =  165 bits (418), Expect = 3e-39
 Identities = 79/125 (63%), Positives = 86/125 (68%)
 Frame = +1

Query: 1   VPGKARSKRSRLAPCNWXXXXXXXXXXXXXXXXXXXXXXXXGKKTYKKKELAEYGDGRKC 180
           VPGKARSKR R  PC+W                           + KK+     GDGRKC
Sbjct: 166 VPGKARSKRPRSVPCDWSTRLLVLSPATSSSESDAFKKPPKTTSSKKKENSDSAGDGRKC 225

Query: 181 LHCATDKTPQWRTGPLGPKTLCNACGVRYKSGRLVPEYRPASSPTFTLAKHSNSHRKVME 360
           LHCA +KTPQWRTGP+GPKTLCNACGVR+KSGRLVPEYRPASSPTF  AKHSNSHRKV+E
Sbjct: 226 LHCAAEKTPQWRTGPMGPKTLCNACGVRFKSGRLVPEYRPASSPTFVSAKHSNSHRKVLE 285

Query: 361 LRRQK 375
           LRRQK
Sbjct: 286 LRRQK 290


>ref|XP_002308598.1| predicted protein [Populus trichocarpa] gi|222854574|gb|EEE92121.1|
           predicted protein [Populus trichocarpa]
          Length = 357

 Score =  164 bits (414), Expect = 9e-39
 Identities = 86/136 (63%), Positives = 90/136 (66%), Gaps = 11/136 (8%)
 Frame = +1

Query: 1   VPGKARSKRSRLAPCNWXXXXXXXXXXXXXXXXXXXXXXXX----GKKTYK-------KK 147
           VP KARSKRSR AP NW                            GKKT K       + 
Sbjct: 176 VPAKARSKRSRAAPGNWASRLLVLSRTTSSSEPEIIPGSTQHPNSGKKTIKGAVGLKKRD 235

Query: 148 ELAEYGDGRKCLHCATDKTPQWRTGPLGPKTLCNACGVRYKSGRLVPEYRPASSPTFTLA 327
              E GDGRKCLHCATDKTPQWRTGP+GPKTLCNACGVRYKSGRLVPEYRPA+SPTF L 
Sbjct: 236 GDVEGGDGRKCLHCATDKTPQWRTGPMGPKTLCNACGVRYKSGRLVPEYRPAASPTFMLT 295

Query: 328 KHSNSHRKVMELRRQK 375
           KHSNSHRKV+ELRRQK
Sbjct: 296 KHSNSHRKVLELRRQK 311


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