BLASTX nr result

ID: Cimicifuga21_contig00016777 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00016777
         (610 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002324968.1| predicted protein [Populus trichocarpa] gi|2...    72   8e-11
ref|NP_001078384.1| protein rotundifolia like 12 [Arabidopsis th...    63   5e-08
ref|XP_002863136.1| hypothetical protein ARALYDRAFT_332982 [Arab...    60   2e-07
gb|AFK38245.1| unknown [Medicago truncatula]                           58   1e-06
ref|XP_003568811.1| PREDICTED: uncharacterized protein LOC100840...    56   4e-06

>ref|XP_002324968.1| predicted protein [Populus trichocarpa] gi|222866402|gb|EEF03533.1|
           predicted protein [Populus trichocarpa]
          Length = 59

 Score = 72.0 bits (175), Expect = 8e-11
 Identities = 34/59 (57%), Positives = 41/59 (69%), Gaps = 3/59 (5%)
 Frame = -3

Query: 569 MATVSYFPSTQRQSCSK---KNRFSKRCLTMVKQQKTRFYILGRCVSMLLCWRAHALAD 402
           M+  +Y P   R +  K   KN F +RCL+M KQQKTRFYILGRC+SMLLCW  HA+ D
Sbjct: 1   MSFSNYLPLPSRSNRRKGHGKNGFRRRCLSMAKQQKTRFYILGRCISMLLCWHDHAIRD 59


>ref|NP_001078384.1| protein rotundifolia like 12 [Arabidopsis thaliana]
           gi|42822053|tpg|DAA02281.1| TPA_exp: DVL10 [Arabidopsis
           thaliana] gi|332657874|gb|AEE83274.1| protein
           rotundifolia like 12 [Arabidopsis thaliana]
          Length = 55

 Score = 62.8 bits (151), Expect = 5e-08
 Identities = 26/41 (63%), Positives = 32/41 (78%)
 Frame = -3

Query: 524 SKKNRFSKRCLTMVKQQKTRFYILGRCVSMLLCWRAHALAD 402
           ++K RF  RCL M KQQ+TR YIL RCVSMLLCW  H+++D
Sbjct: 15  NRKTRFGDRCLLMAKQQRTRLYILRRCVSMLLCWHDHSISD 55


>ref|XP_002863136.1| hypothetical protein ARALYDRAFT_332982 [Arabidopsis lyrata subsp.
           lyrata] gi|297308970|gb|EFH39395.1| hypothetical protein
           ARALYDRAFT_332982 [Arabidopsis lyrata subsp. lyrata]
          Length = 51

 Score = 60.5 bits (145), Expect = 2e-07
 Identities = 25/41 (60%), Positives = 31/41 (75%)
 Frame = -3

Query: 524 SKKNRFSKRCLTMVKQQKTRFYILGRCVSMLLCWRAHALAD 402
           ++K  F  RCL M KQQ+TR YIL RCVSMLLCW  H+++D
Sbjct: 11  NRKTSFGDRCLLMAKQQRTRLYILRRCVSMLLCWHDHSISD 51


>gb|AFK38245.1| unknown [Medicago truncatula]
          Length = 45

 Score = 57.8 bits (138), Expect = 1e-06
 Identities = 22/40 (55%), Positives = 30/40 (75%)
 Frame = -3

Query: 521 KKNRFSKRCLTMVKQQKTRFYILGRCVSMLLCWRAHALAD 402
           KK  F+KRC +M KQ K R +I GRC++MLLCW  H+++D
Sbjct: 6   KKTSFTKRCFSMAKQHKARIHIFGRCLTMLLCWHNHSISD 45


>ref|XP_003568811.1| PREDICTED: uncharacterized protein LOC100840918 [Brachypodium
           distachyon]
          Length = 80

 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 27/51 (52%), Positives = 35/51 (68%), Gaps = 2/51 (3%)
 Frame = -3

Query: 548 PST--QRQSCSKKNRFSKRCLTMVKQQKTRFYILGRCVSMLLCWRAHALAD 402
           PST  +R+  +      +RC T++KQQ+TR YIL RCVSMLLCW  H L+D
Sbjct: 30  PSTPRRRKHAAAGCGLRRRCYTVLKQQRTRLYILRRCVSMLLCWNEHDLSD 80


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