BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00016769
         (984 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002269920.2| PREDICTED: DNA polymerase epsilon catalytic ...   538   e-151
ref|XP_002328167.1| predicted protein [Populus trichocarpa] gi|2...   509   e-142
ref|XP_002529065.1| DNA polymerase epsilon, catalytic subunit, p...   483   e-134
ref|XP_004160105.1| PREDICTED: DNA polymerase epsilon catalytic ...   481   e-133
ref|XP_004145799.1| PREDICTED: DNA polymerase epsilon catalytic ...   479   e-133

>ref|XP_002269920.2| PREDICTED: DNA polymerase epsilon catalytic subunit A [Vitis
            vinifera]
          Length = 2214

 Score =  538 bits (1387), Expect = e-151
 Identities = 257/331 (77%), Positives = 286/331 (86%), Gaps = 3/331 (0%)
 Frame = -1

Query: 984  WSLAELHMKTTTECSYLEQPIPFFYLYHSMSEGRGVYVIYFSASGMVYVVVVNPFQNKEL 805
            WSL+ELHMKTTTEC YLEQ I FFYLYHS+SEGR +YV YF AS  + VVVVNPFQNKEL
Sbjct: 1453 WSLSELHMKTTTECPYLEQSISFFYLYHSISEGRAIYVGYFPASRTISVVVVNPFQNKEL 1512

Query: 804  SPTILEKQFREACQALSVEPPSSGTGVVFKVEYVGYVKDAEKILQRTINEYRHQHDGPVI 625
            SP+I+EKQFREAC+ALS+EPP    G+ FKV+YVGYVKDAEK LQRTIN++RHQH GP +
Sbjct: 1513 SPSIIEKQFREACEALSIEPPQPRNGISFKVDYVGYVKDAEKFLQRTINDHRHQHHGPEV 1572

Query: 624  GVVECPKVHSLKSGISVLSDFPCVNIPCNARDSHYQALGWQVVAAKIGMQRCAASSQWLK 445
             V+ECP VH LKSGI  L D PCVNIP NARDSHYQALGWQ+VAAKIGMQRCAA++QWL 
Sbjct: 1573 AVIECPNVHLLKSGIRALDDLPCVNIPSNARDSHYQALGWQIVAAKIGMQRCAAATQWLN 1632

Query: 444  ERISLSRYAHVPLGNFELDWLLFTADVFFSRALHDQQQVLWISDDGIPDLGGVSEDDTCF 265
            ERISL+RYAHVPLGNFE DWL+FTAD+FFSRAL DQQQVLWISD+GIPDLGG++E+DTCF
Sbjct: 1633 ERISLARYAHVPLGNFEPDWLIFTADLFFSRALRDQQQVLWISDNGIPDLGGLNEEDTCF 1692

Query: 264  ADEVLQPVLNYPGAYRKVTVELKIHHLAVDALLKSNQVNEMEGGALFGFDQDLNSGPH-- 91
            ADEV QPVL YPGAYRKV+VELKIHHLAV+ALLKSNQVNEMEGGALFGF+QD+N G H  
Sbjct: 1693 ADEVHQPVLTYPGAYRKVSVELKIHHLAVNALLKSNQVNEMEGGALFGFEQDMNMGAHGF 1752

Query: 90   -EHSAFDETRSCASAFRVLKHLIQRCLQDAI 1
             E   FDE   CA  FRVLK LIQRCL DA+
Sbjct: 1753 NEQCGFDEATLCAPTFRVLKQLIQRCLADAV 1783


>ref|XP_002328167.1| predicted protein [Populus trichocarpa] gi|222837682|gb|EEE76047.1|
            predicted protein [Populus trichocarpa]
          Length = 2221

 Score =  509 bits (1311), Expect = e-142
 Identities = 245/330 (74%), Positives = 276/330 (83%), Gaps = 2/330 (0%)
 Frame = -1

Query: 984  WSLAELHMKTTTECSYLEQPIPFFYLYHSMSEGRGVYVIYFSASGMVYVVVVNPFQNKEL 805
            WSL+ELHMKTTTECSYLEQ I FFY+YHS+SEGR +YVIY  A G V VVVVNP+QNK++
Sbjct: 1450 WSLSELHMKTTTECSYLEQSISFFYIYHSISEGRAIYVIYLPALGTVSVVVVNPYQNKDI 1509

Query: 804  SPTILEKQFREACQALSVEPPSSGTGVVFKVEYVGYVKDAEKILQRTINEYRHQHDGPVI 625
            +P+ LE+QFREACQALS+E       +VFKV+YVG+VKDAEKILQ TI+E R +H GP +
Sbjct: 1510 TPSFLERQFREACQALSIEAIPPRNSIVFKVDYVGHVKDAEKILQGTISELRDKHHGPTL 1569

Query: 624  GVVECPKVHSLKSGISVLSDFPCVNIPCNARDSHYQALGWQVVAAKIGMQRCAASSQWLK 445
             V+ECP  H +KSG+  L DFPCV+IP NARDS YQ LGWQ  +AKIGMQR AASSQWL 
Sbjct: 1570 AVIECPNAHLMKSGVPALDDFPCVSIPSNARDSQYQVLGWQQASAKIGMQRSAASSQWLN 1629

Query: 444  ERISLSRYAHVPLGNFELDWLLFTADVFFSRALHDQQQVLWISDDGIPDLGGVSEDDTCF 265
            ERISLSRYAHVPLGNFELDWL+FTADVFFSRALHDQQQVLWISDDG+PDLGG  E+ TCF
Sbjct: 1630 ERISLSRYAHVPLGNFELDWLIFTADVFFSRALHDQQQVLWISDDGVPDLGGNHEESTCF 1689

Query: 264  ADEVLQPVLNYPGAYRKVTVELKIHHLAVDALLKSNQVNEMEGGALFGFDQDLNSGP--H 91
            ADEV QPVL YPGAYRKV+VELKIHHLAVDALLKSNQ+NEMEGGAL GFDQD+NS    +
Sbjct: 1690 ADEVQQPVLTYPGAYRKVSVELKIHHLAVDALLKSNQINEMEGGALLGFDQDMNSSTTLY 1749

Query: 90   EHSAFDETRSCASAFRVLKHLIQRCLQDAI 1
            + S FDE  S AS  RVLK LIQRCL DA+
Sbjct: 1750 DQSGFDEATSSASGLRVLKQLIQRCLADAV 1779


>ref|XP_002529065.1| DNA polymerase epsilon, catalytic subunit, putative [Ricinus
            communis] gi|223531477|gb|EEF33309.1| DNA polymerase
            epsilon, catalytic subunit, putative [Ricinus communis]
          Length = 2227

 Score =  483 bits (1242), Expect = e-134
 Identities = 237/330 (71%), Positives = 267/330 (80%), Gaps = 2/330 (0%)
 Frame = -1

Query: 984  WSLAELHMKTTTECSYLEQPIPFFYLYHSMSEGRGVYVIYFSASGMVYVVVVNPFQNKEL 805
            WSL EL MKTTTECSYLEQ I FFYLY S+SEGR V V+Y      V VVVVNP+QNK+L
Sbjct: 1457 WSLNELQMKTTTECSYLEQSISFFYLYQSISEGRAVVVVYLPFLRTVSVVVVNPYQNKDL 1516

Query: 804  SPTILEKQFREACQALSVEPPSSGTGVVFKVEYVGYVKDAEKILQRTINEYRHQHDGPVI 625
            SP+ LE+QFREAC ALSVEPP+    +VFKV+YVG+VKDAE+ILQ TI E R +H GP +
Sbjct: 1517 SPSFLERQFREACIALSVEPPTPRNAIVFKVDYVGHVKDAERILQGTIREVRDKHHGPTL 1576

Query: 624  GVVECPKVHSLKSGISVLSDFPCVNIPCNARDSHYQALGWQVVAAKIGMQRCAASSQWLK 445
             V+ECP  H +KSGI  L +FPCV IP NARDS YQ LGWQ  AAK  MQR AASSQWL 
Sbjct: 1577 AVIECPNDHLMKSGIPALDNFPCVRIPSNARDSQYQVLGWQQAAAKTAMQRSAASSQWLN 1636

Query: 444  ERISLSRYAHVPLGNFELDWLLFTADVFFSRALHDQQQVLWISDDGIPDLGGVSEDDTCF 265
            ERI+LSRYAHVPLGNFELDWL+FTADVF SRAL DQQQ+LWISDDG+PDLGG+SE+ +CF
Sbjct: 1637 ERITLSRYAHVPLGNFELDWLIFTADVFISRALRDQQQLLWISDDGVPDLGGISEESSCF 1696

Query: 264  ADEVLQPVLNYPGAYRKVTVELKIHHLAVDALLKSNQVNEMEGGALFGFDQDLNSGPH-- 91
            ADEV QP+L YPGAYRKV+VELKIHHLAV+ALLKS+QVNEMEGGAL GFDQD++SG H  
Sbjct: 1697 ADEVHQPILTYPGAYRKVSVELKIHHLAVNALLKSSQVNEMEGGALLGFDQDMSSGSHIC 1756

Query: 90   EHSAFDETRSCASAFRVLKHLIQRCLQDAI 1
            E    DE  S A A RVLK LIQRCL DA+
Sbjct: 1757 EQYGVDEATSSAPALRVLKQLIQRCLADAV 1786


>ref|XP_004160105.1| PREDICTED: DNA polymerase epsilon catalytic subunit A-like, partial
            [Cucumis sativus]
          Length = 2051

 Score =  481 bits (1237), Expect = e-133
 Identities = 228/331 (68%), Positives = 272/331 (82%), Gaps = 3/331 (0%)
 Frame = -1

Query: 984  WSLAELHMKTTTECSYLEQPIPFFYLYHSMSEGRGVYVIYFSASGMVYVVVVNPFQNKEL 805
            WSL EL MKTTTECSYLE+ I FFY+YHS+SEGR ++V +F ++  ++VVVVNP+QNK+L
Sbjct: 1448 WSLDELQMKTTTECSYLEKSISFFYVYHSISEGRAIFVTFFPSTRSIFVVVVNPYQNKDL 1507

Query: 804  SPTILEKQFREACQALSVEPPSSGTGVVFKVEYVGYVKDAEKILQRTINEYRHQHDGPVI 625
            S T LE+QFREA Q LS E     +G+ +KV+YV  +K+AE ILQR+I E+R  + GP +
Sbjct: 1508 SSTFLERQFREASQMLSGESQPPKSGITYKVDYVVNIKEAEVILQRSITEHRSLNHGPAL 1567

Query: 624  GVVECPKVHSLKSGISVLSDFPCVNIPCNARDSHYQALGWQVVAAKIGMQRCAASSQWLK 445
             V++CP V  LKSG+ VL DFPCV IP NARD+ YQ LGWQ  AAKIGMQRCAASSQWL 
Sbjct: 1568 AVIQCPSVQRLKSGVRVLDDFPCVTIPSNARDNQYQVLGWQQTAAKIGMQRCAASSQWLN 1627

Query: 444  ERISLSRYAHVPLGNFELDWLLFTADVFFSRALHDQQQVLWISDDGIPDLGGVSEDDTCF 265
            ERISL+RYAHVPLGNFELDWL+FTAD+FFSRALHDQQQVLWISDDG+PD+GG++ +D CF
Sbjct: 1628 ERISLARYAHVPLGNFELDWLIFTADIFFSRALHDQQQVLWISDDGVPDIGGINIEDVCF 1687

Query: 264  ADEVLQPVLNYPGAYRKVTVELKIHHLAVDALLKSNQVNEMEGGALFGFDQDLNSG---P 94
            ADEV QP+L YPGAYRKV+VELKIHHLAV+ALLKSNQVNEMEGG+LFGF++D+  G    
Sbjct: 1688 ADEVQQPILTYPGAYRKVSVELKIHHLAVNALLKSNQVNEMEGGSLFGFERDIQCGAQFS 1747

Query: 93   HEHSAFDETRSCASAFRVLKHLIQRCLQDAI 1
            +E   FDE  SCA AFRVLK LIQRCL DA+
Sbjct: 1748 NEEGGFDEAASCAPAFRVLKQLIQRCLTDAV 1778


>ref|XP_004145799.1| PREDICTED: DNA polymerase epsilon catalytic subunit A-like [Cucumis
            sativus]
          Length = 2206

 Score =  479 bits (1233), Expect = e-133
 Identities = 227/331 (68%), Positives = 271/331 (81%), Gaps = 3/331 (0%)
 Frame = -1

Query: 984  WSLAELHMKTTTECSYLEQPIPFFYLYHSMSEGRGVYVIYFSASGMVYVVVVNPFQNKEL 805
            WSL EL MKTTTECSYLE+ I FFY+YHS+SEGR ++V +F ++  ++VVVVNP+QNK+L
Sbjct: 1448 WSLDELQMKTTTECSYLEKSISFFYVYHSISEGRAIFVTFFPSTRSIFVVVVNPYQNKDL 1507

Query: 804  SPTILEKQFREACQALSVEPPSSGTGVVFKVEYVGYVKDAEKILQRTINEYRHQHDGPVI 625
            S T LE+QFREA Q LS E     +G+ +KV+YV  +K+AE ILQR+I E+R  + GP +
Sbjct: 1508 SSTFLERQFREASQMLSGESQPPKSGITYKVDYVVNIKEAEVILQRSITEHRSLNHGPTL 1567

Query: 624  GVVECPKVHSLKSGISVLSDFPCVNIPCNARDSHYQALGWQVVAAKIGMQRCAASSQWLK 445
             V++CP V  LKSG+ VL DFPCV IP NARD+ YQ LGWQ  AAKIGMQRCAASSQWL 
Sbjct: 1568 AVIQCPSVQRLKSGVRVLDDFPCVTIPSNARDNQYQVLGWQQTAAKIGMQRCAASSQWLN 1627

Query: 444  ERISLSRYAHVPLGNFELDWLLFTADVFFSRALHDQQQVLWISDDGIPDLGGVSEDDTCF 265
            ERISL+RYAHVPLGNFELDWL+FTAD+FFSRALHDQQQVLWISDDG+PD+GG++ +D CF
Sbjct: 1628 ERISLARYAHVPLGNFELDWLIFTADIFFSRALHDQQQVLWISDDGVPDIGGINIEDVCF 1687

Query: 264  ADEVLQPVLNYPGAYRKVTVELKIHHLAVDALLKSNQVNEMEGGALFGFDQDLNSG---P 94
            ADEV QP+L YPGAYRKV+VE KIHHLAV+ALLKSNQVNEMEGG+LFGF++D+  G    
Sbjct: 1688 ADEVQQPILTYPGAYRKVSVEFKIHHLAVNALLKSNQVNEMEGGSLFGFERDIQCGAQFS 1747

Query: 93   HEHSAFDETRSCASAFRVLKHLIQRCLQDAI 1
            +E   FDE  SCA AFRVLK LIQRCL DA+
Sbjct: 1748 NEEGGFDEAASCAPAFRVLKQLIQRCLTDAV 1778