BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00016756
         (1154 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002271258.1| PREDICTED: exosome complex component rrp4-li...   506   e-141
emb|CBI32318.3| unnamed protein product [Vitis vinifera]              489   e-136
ref|XP_004144644.1| PREDICTED: exosome complex component RRP4-li...   479   e-133
ref|XP_003564042.1| PREDICTED: exosome complex component rrp4-li...   476   e-132
ref|XP_003554237.1| PREDICTED: exosome complex component RRP4-li...   474   e-131

>ref|XP_002271258.1| PREDICTED: exosome complex component rrp4-like [Vitis vinifera]
          Length = 330

 Score =  506 bits (1302), Expect = e-141
 Identities = 253/332 (76%), Positives = 291/332 (87%)
 Frame = +3

Query: 63   MRELQLSLNQTQKIRLDKALQQIQLLSSKINPSASASVTVADTIPVNQEDGVLKGHGTSD 242
            MR  QLSLNQTQK+RL +AL+Q++ LSSK N  ++ASV VADTIPVN EDGVLKGHGT D
Sbjct: 1    MRGFQLSLNQTQKLRLQRALEQLESLSSKSN--SNASVAVADTIPVNYEDGVLKGHGTLD 58

Query: 243  LDGEVVATLCGVVERVNKLVYVRTLRARYKPEIGDIVVGRVIEIAPKRWRIEINFSQDAV 422
            LDGEVVATLCGVVERVNKLVY+RTLRARYKPE GDI+VGRV EIAPKRWR++INFSQDAV
Sbjct: 59   LDGEVVATLCGVVERVNKLVYIRTLRARYKPETGDIIVGRVTEIAPKRWRLDINFSQDAV 118

Query: 423  LMLSSMNMPDGIQRRRTAVDELNMRSIFEENDVICAEVRGFQHDGSLHLQARSQKYGKLE 602
            LMLSSMN+PDGIQRRRTAVDELNMRSIFEEND++CAEVRGFQHDGSLHLQARSQKYGKLE
Sbjct: 119  LMLSSMNLPDGIQRRRTAVDELNMRSIFEENDIVCAEVRGFQHDGSLHLQARSQKYGKLE 178

Query: 603  KGQLLTIPPYLVKRRKQHFHHLEQYGIDLILGCNGFIWVGEHVEVRDAMMVQDQEIKPNQ 782
            +GQ+LTI PYLVKRRKQH H+LE++G+DLILGCNGFIWVGEHVE +  ++++DQ  K  Q
Sbjct: 179  RGQVLTISPYLVKRRKQHLHYLEEFGVDLILGCNGFIWVGEHVEAK-GILIEDQTDKAEQ 237

Query: 783  QNNTTSDRILSSIEEQEKTYTPLETRQIICRIANAVRVLSSLGFNLTVELIMDTVEMSIS 962
             N  +S     S+EEQE+TYT LETRQ ICRIANAVRVL++LGF++TVE+I +TV +S S
Sbjct: 238  LNTKSSSSTFMSLEEQERTYTSLETRQNICRIANAVRVLANLGFSVTVEVIKETVNLSSS 297

Query: 963  LNLDIHEMLGAEFYVRTAEKEVERRSLSGKKK 1058
            LNLDIHEMLG+EFYV  AE E  R+S+  KKK
Sbjct: 298  LNLDIHEMLGSEFYVLVAEGEATRKSMFTKKK 329


>emb|CBI32318.3| unnamed protein product [Vitis vinifera]
          Length = 320

 Score =  489 bits (1260), Expect = e-136
 Identities = 249/332 (75%), Positives = 285/332 (85%)
 Frame = +3

Query: 63   MRELQLSLNQTQKIRLDKALQQIQLLSSKINPSASASVTVADTIPVNQEDGVLKGHGTSD 242
            MR  QLSLNQTQK+RL +AL+Q++ LSSK N  ++ASV VADTIPVN EDGVLKGHGT D
Sbjct: 1    MRGFQLSLNQTQKLRLQRALEQLESLSSKSN--SNASVAVADTIPVNYEDGVLKGHGTLD 58

Query: 243  LDGEVVATLCGVVERVNKLVYVRTLRARYKPEIGDIVVGRVIEIAPKRWRIEINFSQDAV 422
            LDGEVVATLCGVVERVNKLVY+RTLRARYKPE GDI+VGRV EIAPKRWR++INFSQDAV
Sbjct: 59   LDGEVVATLCGVVERVNKLVYIRTLRARYKPETGDIIVGRVTEIAPKRWRLDINFSQDAV 118

Query: 423  LMLSSMNMPDGIQRRRTAVDELNMRSIFEENDVICAEVRGFQHDGSLHLQARSQKYGKLE 602
            LMLSSMN+PDGIQRRRTAVDELNMRSIFEEND++CAEVRGFQHDGSLHLQARSQKYGKLE
Sbjct: 119  LMLSSMNLPDGIQRRRTAVDELNMRSIFEENDIVCAEVRGFQHDGSLHLQARSQKYGKLE 178

Query: 603  KGQLLTIPPYLVKRRKQHFHHLEQYGIDLILGCNGFIWVGEHVEVRDAMMVQDQEIKPNQ 782
            +GQ+LTI PYLVKRRKQH H+LE++G+DLILGCNGFIWVGEHVE +  ++++DQ  K  Q
Sbjct: 179  RGQVLTISPYLVKRRKQHLHYLEEFGVDLILGCNGFIWVGEHVEAK-GILIEDQTDKAEQ 237

Query: 783  QNNTTSDRILSSIEEQEKTYTPLETRQIICRIANAVRVLSSLGFNLTVELIMDTVEMSIS 962
             N  +S R          TYT LETRQ ICRIANAVRVL++LGF++TVE+I +TV +S S
Sbjct: 238  LNTKSSKR----------TYTSLETRQNICRIANAVRVLANLGFSVTVEVIKETVNLSSS 287

Query: 963  LNLDIHEMLGAEFYVRTAEKEVERRSLSGKKK 1058
            LNLDIHEMLG+EFYV  AE E  R+S+  KKK
Sbjct: 288  LNLDIHEMLGSEFYVLVAEGEATRKSMFTKKK 319


>ref|XP_004144644.1| PREDICTED: exosome complex component RRP4-like [Cucumis sativus]
          Length = 327

 Score =  479 bits (1232), Expect = e-133
 Identities = 243/332 (73%), Positives = 285/332 (85%), Gaps = 1/332 (0%)
 Frame = +3

Query: 63   MRELQLSLNQTQKIRLDKALQQIQLLSSKINPSASASVTVADTIPVNQEDGVLKGHGTSD 242
            M+ LQLSLN TQKIRL++A ++++ LSSK N  + ASV VADTIP+N EDGVLKGHGT D
Sbjct: 1    MKGLQLSLNHTQKIRLERAQERLKSLSSKGN--SDASVVVADTIPLNYEDGVLKGHGTLD 58

Query: 243  LDGEVVATLCGVVERVNKLVYVRTLRARYKPEIGDIVVGRVIEIAPKRWRIEINFSQDAV 422
            L+GEVVA++CGVVERVNKL+YVR LRARYKPE+GDIVVGRV E+APKRWR++IN+ QDAV
Sbjct: 59   LNGEVVASICGVVERVNKLIYVRALRARYKPEVGDIVVGRVTEVAPKRWRLDINYCQDAV 118

Query: 423  LMLSSMNMPDGIQRRRTAVDELNMRSIFEENDVICAEVRGFQHDGSLHLQARSQKYGKLE 602
            LMLSSMN+PDGIQRRRTAVDELNMRSIFEENDVICAEVRG QHDG LHLQARSQKYGKLE
Sbjct: 119  LMLSSMNLPDGIQRRRTAVDELNMRSIFEENDVICAEVRGLQHDG-LHLQARSQKYGKLE 177

Query: 603  KGQLLTIPPYLVKRRKQHFHHLEQYGIDLILGCNGFIWVGEHVEVRDA-MMVQDQEIKPN 779
            +GQLLT+ PYL+KRRKQHFHHLEQYGIDLILGCNGFIW+GEHV+ +    M++DQ  KP 
Sbjct: 178  RGQLLTVSPYLIKRRKQHFHHLEQYGIDLILGCNGFIWIGEHVDPKVVDTMIEDQVDKPE 237

Query: 780  QQNNTTSDRILSSIEEQEKTYTPLETRQIICRIANAVRVLSSLGFNLTVELIMDTVEMSI 959
            Q+ +       + ++E    YTPLETRQ ICR ANA+RVLS+LGF +TVE+IM+ V +SI
Sbjct: 238  QKGSKFEGTFGNQVQE---VYTPLETRQNICRTANAIRVLSTLGFIMTVEVIMEIVNLSI 294

Query: 960  SLNLDIHEMLGAEFYVRTAEKEVERRSLSGKK 1055
            SLN+D+HEMLG+EF V TAEKEVERRS S K+
Sbjct: 295  SLNIDVHEMLGSEFCVLTAEKEVERRSSSKKR 326


>ref|XP_003564042.1| PREDICTED: exosome complex component rrp4-like [Brachypodium
            distachyon]
          Length = 319

 Score =  476 bits (1224), Expect = e-132
 Identities = 238/332 (71%), Positives = 280/332 (84%)
 Frame = +3

Query: 63   MRELQLSLNQTQKIRLDKALQQIQLLSSKINPSASASVTVADTIPVNQEDGVLKGHGTSD 242
            MR+L L LNQTQ++RL+ AL ++Q L+     +++ASVTVAD IPVNQED +LKGHGTSD
Sbjct: 1    MRDLHLPLNQTQRVRLEAALHELQSLAPAA--ASAASVTVADNIPVNQEDNILKGHGTSD 58

Query: 243  LDGEVVATLCGVVERVNKLVYVRTLRARYKPEIGDIVVGRVIEIAPKRWRIEINFSQDAV 422
             DGEVVATLCGVVERVNKLVYVRTLRARYKPE+GDI+VGRVIEIAPKRWR+EINFSQDAV
Sbjct: 59   HDGEVVATLCGVVERVNKLVYVRTLRARYKPEVGDIIVGRVIEIAPKRWRLEINFSQDAV 118

Query: 423  LMLSSMNMPDGIQRRRTAVDELNMRSIFEENDVICAEVRGFQHDGSLHLQARSQKYGKLE 602
            LMLSSMN+PDGIQRRRTAVDELNMRSIFEENDV+CAEVRGFQHDGSLHLQARSQKYGKL+
Sbjct: 119  LMLSSMNLPDGIQRRRTAVDELNMRSIFEENDVVCAEVRGFQHDGSLHLQARSQKYGKLQ 178

Query: 603  KGQLLTIPPYLVKRRKQHFHHLEQYGIDLILGCNGFIWVGEHVEVRDAMMVQDQEIKPNQ 782
            +GQLLT+P YLVKRRKQHFHHLEQY +DLILGCNGF+WVG+HV VR+             
Sbjct: 179  RGQLLTVPAYLVKRRKQHFHHLEQYDVDLILGCNGFVWVGQHVLVRE------------- 225

Query: 783  QNNTTSDRILSSIEEQEKTYTPLETRQIICRIANAVRVLSSLGFNLTVELIMDTVEMSIS 962
              NT S      + ++  T+TP+ETR+ ICR+ANAVRVLS+LGF LT+ELI+ T E S+S
Sbjct: 226  --NTESKEDKQKLSDEVDTFTPIETRKHICRLANAVRVLSALGFTLTIELIIQTAEASLS 283

Query: 963  LNLDIHEMLGAEFYVRTAEKEVERRSLSGKKK 1058
             N++I++MLGAEFYV+TAE+E  RR+   +KK
Sbjct: 284  SNVEINDMLGAEFYVQTAEREARRRADLLRKK 315


>ref|XP_003554237.1| PREDICTED: exosome complex component RRP4-like [Glycine max]
          Length = 327

 Score =  474 bits (1220), Expect = e-131
 Identities = 233/332 (70%), Positives = 286/332 (86%)
 Frame = +3

Query: 63   MRELQLSLNQTQKIRLDKALQQIQLLSSKINPSASASVTVADTIPVNQEDGVLKGHGTSD 242
            MRE+QL L+QTQK+RL KAL+Q++ LS+K+N  + ASV +AD+I VN EDGVLKGHGT+D
Sbjct: 1    MREIQLPLSQTQKVRLQKALEQLESLSTKVN--SDASVIIADSIHVNHEDGVLKGHGTAD 58

Query: 243  LDGEVVATLCGVVERVNKLVYVRTLRARYKPEIGDIVVGRVIEIAPKRWRIEINFSQDAV 422
            L+GEVVATLCGVVERVNKLVYVR LR+RYKPE+GDIV+GRV+E+A KRWR+EIN++QDAV
Sbjct: 59   LNGEVVATLCGVVERVNKLVYVRALRSRYKPEVGDIVIGRVVEVAQKRWRLEINYNQDAV 118

Query: 423  LMLSSMNMPDGIQRRRTAVDELNMRSIFEENDVICAEVRGFQHDGSLHLQARSQKYGKLE 602
            L+LSSMNMPDG+QRRRTAVDELNMR IFEENDV+CAEVRGFQHDG LHLQARS+KYGKL 
Sbjct: 119  LLLSSMNMPDGVQRRRTAVDELNMRCIFEENDVVCAEVRGFQHDG-LHLQARSRKYGKLN 177

Query: 603  KGQLLTIPPYLVKRRKQHFHHLEQYGIDLILGCNGFIWVGEHVEVRDAMMVQDQEIKPNQ 782
            +GQLLT+PPYLVKR+KQHFHHLE++GIDLILGCNGFIWVGEHVE +D M+  + ++  + 
Sbjct: 178  RGQLLTVPPYLVKRQKQHFHHLEEFGIDLILGCNGFIWVGEHVEAKDDMI--EDQVSQSD 235

Query: 783  QNNTTSDRILSSIEEQEKTYTPLETRQIICRIANAVRVLSSLGFNLTVELIMDTVEMSIS 962
                  ++   S+EEQEK YT LETR+ I R ANAVRVLS+LGFN+T+E+I   +++S+S
Sbjct: 236  SQVLFPNKNCVSLEEQEKNYTILETRKYISRAANAVRVLSTLGFNITLEIIKGIIDLSLS 295

Query: 963  LNLDIHEMLGAEFYVRTAEKEVERRSLSGKKK 1058
            +NLDIH+MLG+EF V  AEKE ERRS   K++
Sbjct: 296  MNLDIHDMLGSEFCVLVAEKEAERRSSMKKRR 327