BLASTX nr result

ID: Cimicifuga21_contig00016755 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00016755
         (331 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002277373.1| PREDICTED: uncharacterized protein LOC100264...   161   6e-38
ref|XP_004147835.1| PREDICTED: DNA-directed RNA polymerase I sub...   156   1e-36
ref|XP_003534490.1| PREDICTED: DNA-directed RNA polymerase I sub...   155   2e-36
ref|XP_002510510.1| conserved hypothetical protein [Ricinus comm...   152   2e-35
ref|NP_001236705.1| uncharacterized protein LOC100527229 [Glycin...   151   5e-35

>ref|XP_002277373.1| PREDICTED: uncharacterized protein LOC100264366 [Vitis vinifera]
           gi|302142630|emb|CBI19833.3| unnamed protein product
           [Vitis vinifera]
          Length = 233

 Score =  161 bits (407), Expect = 6e-38
 Identities = 76/109 (69%), Positives = 93/109 (85%)
 Frame = -3

Query: 329 YKENMQSSNAMILPGVHPYFGVRLKARLLLFSPKPGMLLEGKVVKLGRESIHVIVLGFCS 150
           Y  ++ S +A ILPG+HPYFGVRLKA+LLLFSPKP ML+EGKVVKL +ESIH++VLGF S
Sbjct: 49  YDVDIPSKDAKILPGIHPYFGVRLKAKLLLFSPKPNMLIEGKVVKLAQESIHIVVLGFSS 108

Query: 149 ACITEEDVREEFRHKTKHDEEVYASRSHKRHVIKVNSMIRFLFKSMDEE 3
           A IT+E++R EF++K KH E V+ SRSHKRHVIKV +MIRFL KS+DEE
Sbjct: 109 AIITDEEIRGEFKYKIKHGEAVFVSRSHKRHVIKVGTMIRFLVKSLDEE 157


>ref|XP_004147835.1| PREDICTED: DNA-directed RNA polymerase I subunit rpa43-like
           [Cucumis sativus] gi|449476884|ref|XP_004154864.1|
           PREDICTED: DNA-directed RNA polymerase I subunit
           rpa43-like [Cucumis sativus]
          Length = 231

 Score =  156 bits (395), Expect = 1e-36
 Identities = 75/109 (68%), Positives = 89/109 (81%)
 Frame = -3

Query: 329 YKENMQSSNAMILPGVHPYFGVRLKARLLLFSPKPGMLLEGKVVKLGRESIHVIVLGFCS 150
           Y+  +   NA IL GVHPYFGV +KA+LLLFSPKP MLLEGKVVKL +ESIHVIVLGF S
Sbjct: 49  YEAKIIDKNAKILSGVHPYFGVTIKAKLLLFSPKPNMLLEGKVVKLRQESIHVIVLGFAS 108

Query: 149 ACITEEDVREEFRHKTKHDEEVYASRSHKRHVIKVNSMIRFLFKSMDEE 3
           A IT ED+R+EF+H+TKH EE++ SR+HK H+IKV +MIR L KS DEE
Sbjct: 109 AVITYEDIRDEFKHRTKHGEEMFVSRAHKHHIIKVGTMIRLLVKSFDEE 157


>ref|XP_003534490.1| PREDICTED: DNA-directed RNA polymerase I subunit rpa43-like
           [Glycine max]
          Length = 232

 Score =  155 bits (393), Expect = 2e-36
 Identities = 79/109 (72%), Positives = 89/109 (81%)
 Frame = -3

Query: 329 YKENMQSSNAMILPGVHPYFGVRLKARLLLFSPKPGMLLEGKVVKLGRESIHVIVLGFCS 150
           Y  N   + A ILPGVHPYFGV+LK  LLLFSPKP MLLEGKVVK+ +ESIHV+VLGF S
Sbjct: 49  YDLNSLHTCAKILPGVHPYFGVKLKVNLLLFSPKPNMLLEGKVVKVTQESIHVVVLGFSS 108

Query: 149 ACITEEDVREEFRHKTKHDEEVYASRSHKRHVIKVNSMIRFLFKSMDEE 3
           A ITE+D+REEF  KTK  +EVYASRSHK+HVIKV +MIRFL KS DEE
Sbjct: 109 AIITEKDIREEFVCKTKRGQEVYASRSHKQHVIKVGTMIRFLVKSFDEE 157


>ref|XP_002510510.1| conserved hypothetical protein [Ricinus communis]
           gi|223551211|gb|EEF52697.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 229

 Score =  152 bits (385), Expect = 2e-35
 Identities = 75/109 (68%), Positives = 88/109 (80%)
 Frame = -3

Query: 329 YKENMQSSNAMILPGVHPYFGVRLKARLLLFSPKPGMLLEGKVVKLGRESIHVIVLGFCS 150
           Y  N     A IL GVHPYFGVRL+A +L+FSPKP MLLEGKVVK+ RESIHVIVLGF S
Sbjct: 49  YAFNAPDKQARILCGVHPYFGVRLQATMLVFSPKPDMLLEGKVVKVTRESIHVIVLGFSS 108

Query: 149 ACITEEDVREEFRHKTKHDEEVYASRSHKRHVIKVNSMIRFLFKSMDEE 3
           A IT+ED+R+EFR+K KH E +Y SR HK+HVIKV +MIRF+ KS+DEE
Sbjct: 109 AIITDEDIRDEFRYKRKHGEALYVSRPHKQHVIKVGTMIRFVVKSLDEE 157


>ref|NP_001236705.1| uncharacterized protein LOC100527229 [Glycine max]
           gi|255631830|gb|ACU16282.1| unknown [Glycine max]
          Length = 232

 Score =  151 bits (382), Expect = 5e-35
 Identities = 77/109 (70%), Positives = 87/109 (79%)
 Frame = -3

Query: 329 YKENMQSSNAMILPGVHPYFGVRLKARLLLFSPKPGMLLEGKVVKLGRESIHVIVLGFCS 150
           Y  N   + A IL GVHPYFGV+LK  LLLFSPKP MLLEGKVVK+ +ESIHV+VLGF S
Sbjct: 49  YDVNSFDTCAKILSGVHPYFGVKLKVNLLLFSPKPNMLLEGKVVKVTQESIHVVVLGFSS 108

Query: 149 ACITEEDVREEFRHKTKHDEEVYASRSHKRHVIKVNSMIRFLFKSMDEE 3
           A I+E+D+REEF  KTK  +EVY SRSHKRHVIKV +MIRFL KS DEE
Sbjct: 109 AIISEKDIREEFVCKTKRGQEVYVSRSHKRHVIKVGTMIRFLVKSFDEE 157


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