BLASTX nr result

ID: Cimicifuga21_contig00016748 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00016748
         (838 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002280849.1| PREDICTED: UPF0136 membrane protein At2g2624...   134   3e-29
ref|XP_002317590.1| predicted protein [Populus trichocarpa] gi|2...   126   5e-27
ref|XP_002522968.1| transmembrane protein 14, putative [Ricinus ...   125   1e-26
ref|XP_002319838.1| predicted protein [Populus trichocarpa] gi|1...   125   2e-26
ref|NP_001235243.1| uncharacterized protein LOC100306195 [Glycin...   122   1e-25

>ref|XP_002280849.1| PREDICTED: UPF0136 membrane protein At2g26240 [Vitis vinifera]
           gi|297737418|emb|CBI26619.3| unnamed protein product
           [Vitis vinifera]
          Length = 119

 Score =  134 bits (337), Expect = 3e-29
 Identities = 71/119 (59%), Positives = 77/119 (64%)
 Frame = +2

Query: 155 MHDFCFTIPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVSLKAYKKERNSYF 334
           MHDFCFTIP                                     +SLKA+KK++NSY 
Sbjct: 1   MHDFCFTIPYGLVLVGGGIVGYAKKGSLASLGGGLGTGFVLILAGYLSLKAFKKKKNSYL 60

Query: 335 ALILETVCAAVLTFVMGQRYMQTSKIMPAGVVAAISILMTGFYLYKIATGGNHIPTKAE 511
           ALILETVCAA LT+VMGQRYMQTSKIMPAG+VA IS LMT FYLYKIATGGNHIPTKAE
Sbjct: 61  ALILETVCAAALTWVMGQRYMQTSKIMPAGIVAGISALMTTFYLYKIATGGNHIPTKAE 119


>ref|XP_002317590.1| predicted protein [Populus trichocarpa] gi|222860655|gb|EEE98202.1|
           predicted protein [Populus trichocarpa]
          Length = 119

 Score =  126 bits (317), Expect = 5e-27
 Identities = 67/119 (56%), Positives = 73/119 (61%)
 Frame = +2

Query: 155 MHDFCFTIPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVSLKAYKKERNSYF 334
           MHDFCFTIP                                     +SLKA+ K +NS+ 
Sbjct: 1   MHDFCFTIPYGLVIGIGGVIGYLRKGSVASLGGGVGTGLVLIFAGYLSLKAFSKGKNSFL 60

Query: 335 ALILETVCAAVLTFVMGQRYMQTSKIMPAGVVAAISILMTGFYLYKIATGGNHIPTKAE 511
            L +ETVCAAVLTFVMGQRYMQTSKIMPAG+VA IS LMT FYLYKIATGGNHIP KAE
Sbjct: 61  GLAIETVCAAVLTFVMGQRYMQTSKIMPAGIVAGISALMTVFYLYKIATGGNHIPAKAE 119


>ref|XP_002522968.1| transmembrane protein 14, putative [Ricinus communis]
           gi|223537780|gb|EEF39398.1| transmembrane protein 14,
           putative [Ricinus communis]
          Length = 119

 Score =  125 bits (314), Expect = 1e-26
 Identities = 66/119 (55%), Positives = 72/119 (60%)
 Frame = +2

Query: 155 MHDFCFTIPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVSLKAYKKERNSYF 334
           MHDFC TIP                                     +SLKA+ K +NSY 
Sbjct: 1   MHDFCLTIPYGLILIVGGVIGYLKRGSMASLGGGVGTGLLLLLAGYLSLKAFGKRKNSYL 60

Query: 335 ALILETVCAAVLTFVMGQRYMQTSKIMPAGVVAAISILMTGFYLYKIATGGNHIPTKAE 511
           AL +ETVCAAVLTFVMGQRYMQTSKIMPAG+V  IS LMTGFYL+KIAT GNHIP KAE
Sbjct: 61  ALAIETVCAAVLTFVMGQRYMQTSKIMPAGIVGGISALMTGFYLFKIATSGNHIPAKAE 119


>ref|XP_002319838.1| predicted protein [Populus trichocarpa] gi|118488838|gb|ABK96229.1|
           unknown [Populus trichocarpa x Populus deltoides]
           gi|222858214|gb|EEE95761.1| predicted protein [Populus
           trichocarpa]
          Length = 119

 Score =  125 bits (313), Expect = 2e-26
 Identities = 65/119 (54%), Positives = 73/119 (61%)
 Frame = +2

Query: 155 MHDFCFTIPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVSLKAYKKERNSYF 334
           MHDFCFTIP                                     +SLKA++K +NS+ 
Sbjct: 1   MHDFCFTIPYGLVLVIGGVIGYLKKGSMASLGGGAGTGLVLIFAGYLSLKAFEKRKNSFL 60

Query: 335 ALILETVCAAVLTFVMGQRYMQTSKIMPAGVVAAISILMTGFYLYKIATGGNHIPTKAE 511
            L +ETVCAA+LTFVMGQRYMQTSKIMPAG+VA IS LMT FYLYKIA GGNHIP KAE
Sbjct: 61  GLAIETVCAAILTFVMGQRYMQTSKIMPAGIVAGISALMTLFYLYKIAAGGNHIPAKAE 119


>ref|NP_001235243.1| uncharacterized protein LOC100306195 [Glycine max]
           gi|255627833|gb|ACU14261.1| unknown [Glycine max]
          Length = 119

 Score =  122 bits (305), Expect = 1e-25
 Identities = 64/119 (53%), Positives = 73/119 (61%)
 Frame = +2

Query: 155 MHDFCFTIPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVSLKAYKKERNSYF 334
           MHDFCFTIP                                     +SL A+ K +NSY 
Sbjct: 1   MHDFCFTIPYGLMLVGGGLFAYISKGSIASLAGGVGSGLLLIVAGYLSLNAFGKRKNSYL 60

Query: 335 ALILETVCAAVLTFVMGQRYMQTSKIMPAGVVAAISILMTGFYLYKIATGGNHIPTKAE 511
           AL LETVCAA+LT+VMGQRY+ TSKIMPAG+VA IS LMT FYLYK+ATGGNH+PTKAE
Sbjct: 61  ALFLETVCAAILTWVMGQRYLGTSKIMPAGLVAGISALMTLFYLYKLATGGNHLPTKAE 119


Top