BLASTX nr result

ID: Cimicifuga21_contig00016741 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00016741
         (1218 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002867249.1| hypothetical protein ARALYDRAFT_491505 [Arab...   389   e-106
ref|XP_002325205.1| predicted protein [Populus trichocarpa] gi|2...   389   e-105
ref|XP_002285174.1| PREDICTED: UDP-sugar transporter UST74c [Vit...   387   e-105
ref|NP_001242077.1| uncharacterized protein LOC100819763 [Glycin...   383   e-104
ref|NP_001078479.1| UDP-sugar transporter-like protein [Arabidop...   380   e-103

>ref|XP_002867249.1| hypothetical protein ARALYDRAFT_491505 [Arabidopsis lyrata subsp.
            lyrata] gi|297313085|gb|EFH43508.1| hypothetical protein
            ARALYDRAFT_491505 [Arabidopsis lyrata subsp. lyrata]
          Length = 342

 Score =  389 bits (1000), Expect = e-106
 Identities = 193/291 (66%), Positives = 228/291 (78%), Gaps = 4/291 (1%)
 Frame = +1

Query: 166  LPISDPP----KDDEESLSKGSAMTKRGIYAAISYMACAVLLVMFNKAALSSYSFPCANV 333
            LP+SDPP     D ++ L KGSAMTKRG YAA+SYMACAV+LV+FNKAALSSY FPC NV
Sbjct: 10   LPVSDPPLAGENDVDDRLFKGSAMTKRGAYAALSYMACAVMLVLFNKAALSSYDFPCVNV 69

Query: 334  ITLFQMICSSLFLYAMKRWRIISFTASEPWAVSDNTANLVPLKTLVHTXXXXXXXXXXXX 513
            ITLFQM+ SSLFLYA++R +IISFTA++ +++ DN +N VP+KTL HT            
Sbjct: 70   ITLFQMVSSSLFLYALRRRKIISFTAADSFSI-DNASNFVPVKTLFHTLPLSIAYLMYML 128

Query: 514  XXXXXVRGVNVPMYTTLRRTTVVITMIVEYLLTGQKYSSKVVGSVALIVLGAFIAGARDL 693
                 VRGVNVPMYTTLRRTTV  TM++EY+LTGQ+Y+  ++GSV +I+LGAF AGARDL
Sbjct: 129  ASMASVRGVNVPMYTTLRRTTVAFTMVIEYMLTGQRYTRSIIGSVGVILLGAFFAGARDL 188

Query: 694  SFDSYGYXXXXXXXXXXXXYLASIARIGKSSGLNSFGLMWSNGIICGPILLFWTYIRGDL 873
            SFD YGY            YLA+IAR GKSSGLNSFGLMWSNGIICGPIL+ WT+I GDL
Sbjct: 189  SFDFYGYGVVFLANISTAVYLATIARTGKSSGLNSFGLMWSNGIICGPILMIWTFICGDL 248

Query: 874  ETTMNFRYLYSPGFQAVMLCSCIMAFFLNYTIFLNTTLNSALTQTMCGNMK 1026
            E T+NF +L SPGF  V+LCSC++AFFLNY IFLNTTLNSALTQT+CGNMK
Sbjct: 249  EKTINFPHLLSPGFMVVLLCSCVLAFFLNYCIFLNTTLNSALTQTICGNMK 299


>ref|XP_002325205.1| predicted protein [Populus trichocarpa] gi|222866639|gb|EEF03770.1|
            predicted protein [Populus trichocarpa]
          Length = 337

 Score =  389 bits (998), Expect = e-105
 Identities = 198/288 (68%), Positives = 224/288 (77%)
 Frame = +1

Query: 163  KLPISDPPKDDEESLSKGSAMTKRGIYAAISYMACAVLLVMFNKAALSSYSFPCANVITL 342
            KLP++DP K + +    GSAMTK+G YAAISYMA AVLLVMFNKAALSSYSFP ANVITL
Sbjct: 8    KLPVTDPLKSEGKE-KNGSAMTKQGAYAAISYMASAVLLVMFNKAALSSYSFPYANVITL 66

Query: 343  FQMICSSLFLYAMKRWRIISFTASEPWAVSDNTANLVPLKTLVHTXXXXXXXXXXXXXXX 522
            FQM+CS LFLY +K W+IISFT SEP  +S+N A LV  KTL+H+               
Sbjct: 67   FQMLCSCLFLYVLKFWKIISFTTSEPQNMSNNPARLVSFKTLLHSLPLALSYLLYMLITM 126

Query: 523  XXVRGVNVPMYTTLRRTTVVITMIVEYLLTGQKYSSKVVGSVALIVLGAFIAGARDLSFD 702
              VR +NVPMYTTLRRTTV  TMIVEYLLTGQK+S +VVGSV +I+LGAF+AGARDLSFD
Sbjct: 127  ESVRAINVPMYTTLRRTTVAFTMIVEYLLTGQKHSLRVVGSVGIIILGAFVAGARDLSFD 186

Query: 703  SYGYXXXXXXXXXXXXYLASIARIGKSSGLNSFGLMWSNGIICGPILLFWTYIRGDLETT 882
            +YGY            YLASIARIGKSSGLNSFGLMW NGIICGPILLFWT IRGDLE  
Sbjct: 187  AYGYAVVFVANICTAVYLASIARIGKSSGLNSFGLMWCNGIICGPILLFWTSIRGDLEAM 246

Query: 883  MNFRYLYSPGFQAVMLCSCIMAFFLNYTIFLNTTLNSALTQTMCGNMK 1026
             NF +L+SPGFQ VML SCIMAF +NY +F+NTTLNSALTQT+CGN+K
Sbjct: 247  RNFPFLFSPGFQVVMLLSCIMAFLINYFVFMNTTLNSALTQTICGNLK 294


>ref|XP_002285174.1| PREDICTED: UDP-sugar transporter UST74c [Vitis vinifera]
          Length = 340

 Score =  387 bits (995), Expect = e-105
 Identities = 195/287 (67%), Positives = 225/287 (78%)
 Frame = +1

Query: 166  LPISDPPKDDEESLSKGSAMTKRGIYAAISYMACAVLLVMFNKAALSSYSFPCANVITLF 345
            LPISDPP+ D++ + KGSAM+KRG YAAISYM+CAVLLV+FNKAALSSY FPCA+VITLF
Sbjct: 12   LPISDPPRPDDK-VFKGSAMSKRGAYAAISYMSCAVLLVIFNKAALSSYHFPCASVITLF 70

Query: 346  QMICSSLFLYAMKRWRIISFTASEPWAVSDNTANLVPLKTLVHTXXXXXXXXXXXXXXXX 525
            Q+ICS  FLYA++RW+IISFT  E   V+D +   VP+ TL+HT                
Sbjct: 71   QIICSCSFLYALRRWKIISFTLGESSNVNDGSPVFVPITTLIHTLPLAITYLLYMLVTME 130

Query: 526  XVRGVNVPMYTTLRRTTVVITMIVEYLLTGQKYSSKVVGSVALIVLGAFIAGARDLSFDS 705
             VRGVNVPMYTTLRRTTVV TM VEY+L GQ+Y+S VVGSV LIVLGAFIAGARDLSFDS
Sbjct: 131  SVRGVNVPMYTTLRRTTVVFTMFVEYILAGQRYTSSVVGSVGLIVLGAFIAGARDLSFDS 190

Query: 706  YGYXXXXXXXXXXXXYLASIARIGKSSGLNSFGLMWSNGIICGPILLFWTYIRGDLETTM 885
            YGY            YLA+IARIGKSSGLNSFGLMW NGI+CGPILL WT+IRGDL   M
Sbjct: 191  YGYAVVFLSNITTAIYLATIARIGKSSGLNSFGLMWCNGILCGPILLLWTFIRGDLGMAM 250

Query: 886  NFRYLYSPGFQAVMLCSCIMAFFLNYTIFLNTTLNSALTQTMCGNMK 1026
            NF + + PGF  V+L SCI+AFFLNY+IFLNTTLNSA+TQT+CGN+K
Sbjct: 251  NFPHFFLPGFLVVLLLSCILAFFLNYSIFLNTTLNSAVTQTICGNLK 297


>ref|NP_001242077.1| uncharacterized protein LOC100819763 [Glycine max]
            gi|255641342|gb|ACU20948.1| unknown [Glycine max]
          Length = 345

 Score =  383 bits (984), Expect = e-104
 Identities = 188/289 (65%), Positives = 224/289 (77%), Gaps = 2/289 (0%)
 Frame = +1

Query: 166  LPISDPPK--DDEESLSKGSAMTKRGIYAAISYMACAVLLVMFNKAALSSYSFPCANVIT 339
            LP+SDPPK  D ++ L KGSAMTKRG +AA+SYM+CAVLLVMFNKAALSSY+FP ANVIT
Sbjct: 14   LPVSDPPKSHDADDKLFKGSAMTKRGAFAAVSYMSCAVLLVMFNKAALSSYNFPSANVIT 73

Query: 340  LFQMICSSLFLYAMKRWRIISFTASEPWAVSDNTANLVPLKTLVHTXXXXXXXXXXXXXX 519
            L QM+CS  FLY ++RWR+ISF+  E   +SDN+   V LKTL HT              
Sbjct: 74   LLQMVCSRCFLYLLRRWRMISFSTGESLHISDNSTKFVSLKTLKHTLPLSGAYLFYMLVT 133

Query: 520  XXXVRGVNVPMYTTLRRTTVVITMIVEYLLTGQKYSSKVVGSVALIVLGAFIAGARDLSF 699
               VRGVNVPMYTTLRRTTVV TM+VE++L GQ+Y+  V+ SV LIV GAF+AGARDLSF
Sbjct: 134  MESVRGVNVPMYTTLRRTTVVFTMLVEFVLVGQRYTPSVIFSVGLIVFGAFVAGARDLSF 193

Query: 700  DSYGYXXXXXXXXXXXXYLASIARIGKSSGLNSFGLMWSNGIICGPILLFWTYIRGDLET 879
            D+YGY            YLA+IARIGK+SGLNSFGLMW NGIICGP+LL WT++RGDL T
Sbjct: 194  DAYGYAVVFMSNIATAIYLATIARIGKTSGLNSFGLMWCNGIICGPVLLIWTFVRGDLMT 253

Query: 880  TMNFRYLYSPGFQAVMLCSCIMAFFLNYTIFLNTTLNSALTQTMCGNMK 1026
            T+NF YL+SPGF  ++L SC++AFFLNY IFLNTTLNSA+TQT+CGN+K
Sbjct: 254  TINFPYLFSPGFIVILLFSCVLAFFLNYCIFLNTTLNSAVTQTICGNLK 302


>ref|NP_001078479.1| UDP-sugar transporter-like protein [Arabidopsis thaliana]
            gi|332660630|gb|AEE86030.1| UDP-sugar transporter-like
            protein [Arabidopsis thaliana]
          Length = 344

 Score =  380 bits (975), Expect = e-103
 Identities = 190/300 (63%), Positives = 227/300 (75%), Gaps = 9/300 (3%)
 Frame = +1

Query: 154  NGGKLPISDPP---------KDDEESLSKGSAMTKRGIYAAISYMACAVLLVMFNKAALS 306
            N   LP+SDPP         K  ++ L KGSAMTKRG YAA+SYMACAV+LV+FNKAALS
Sbjct: 3    NNPVLPVSDPPLAGENDSDGKGVDDRLFKGSAMTKRGAYAALSYMACAVMLVLFNKAALS 62

Query: 307  SYSFPCANVITLFQMICSSLFLYAMKRWRIISFTASEPWAVSDNTANLVPLKTLVHTXXX 486
            SY FPC NVITLFQM+ SSLFLYA++R +IISFTA++ +++ D+ +  VP+KTL HT   
Sbjct: 63   SYDFPCVNVITLFQMVSSSLFLYALRRRKIISFTAADSFSI-DSASTFVPVKTLFHTLPL 121

Query: 487  XXXXXXXXXXXXXXVRGVNVPMYTTLRRTTVVITMIVEYLLTGQKYSSKVVGSVALIVLG 666
                          VRGVNVPMYTTLRRTTV  TM++EY+LTGQ+Y+  ++GSV +I+LG
Sbjct: 122  AIAYLLYMLASMASVRGVNVPMYTTLRRTTVAFTMVIEYMLTGQRYTRSIIGSVGIILLG 181

Query: 667  AFIAGARDLSFDSYGYXXXXXXXXXXXXYLASIARIGKSSGLNSFGLMWSNGIICGPILL 846
            AF AGARDLSFD YGY            YLA+IAR GKSSGLNSFGLMWSNGIICGPIL+
Sbjct: 182  AFFAGARDLSFDFYGYGVVFLANISTAVYLATIARTGKSSGLNSFGLMWSNGIICGPILM 241

Query: 847  FWTYIRGDLETTMNFRYLYSPGFQAVMLCSCIMAFFLNYTIFLNTTLNSALTQTMCGNMK 1026
             WT+I GDLE T+NF +L +PGF  V+LCSC++AF LNY IFLNTTLNSALTQT+CGNMK
Sbjct: 242  IWTFICGDLEKTINFPHLLTPGFMVVLLCSCVLAFVLNYCIFLNTTLNSALTQTICGNMK 301


Top