BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00016727
         (1057 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002280302.1| PREDICTED: exosome complex component RRP41 [...   446   e-123
ref|XP_002530509.1| Exosome complex exonuclease RRP41, putative ...   441   e-121
ref|XP_003549686.1| PREDICTED: exosome complex component RRP41-l...   441   e-121
ref|XP_003626533.1| Exosome complex exonuclease RRP41 [Medicago ...   439   e-121
ref|XP_002320845.1| predicted protein [Populus trichocarpa] gi|1...   437   e-120

>ref|XP_002280302.1| PREDICTED: exosome complex component RRP41 [Vitis vinifera]
            gi|147867252|emb|CAN81194.1| hypothetical protein
            VITISV_022853 [Vitis vinifera]
            gi|297745390|emb|CBI40470.3| unnamed protein product
            [Vitis vinifera]
          Length = 241

 Score =  446 bits (1148), Expect = e-123
 Identities = 225/240 (93%), Positives = 234/240 (97%)
 Frame = -3

Query: 1019 MEFVSPEGLRLDGRRPMEMRQIRAEIGAVSKADGSAVFEMGNTKVIAAVYGPREVQNRGQ 840
            MEFVSPEGLRLDGRRPMEMRQIR EIGAV+KADGSA FEMGNTKVIAAVYGPREV+NR Q
Sbjct: 1    MEFVSPEGLRLDGRRPMEMRQIRGEIGAVAKADGSAFFEMGNTKVIAAVYGPREVENRSQ 60

Query: 839  QMNDQALVRCEYSMANFSTGDRMRKPKGDRRSIEISLVIRQTMEACIMTHLMPRSQIDIF 660
            Q++DQALVRCEY+MANFSTGDRMRKPKGDRRS EISLVIRQTMEACI+THLMPRSQIDIF
Sbjct: 61   QISDQALVRCEYTMANFSTGDRMRKPKGDRRSTEISLVIRQTMEACILTHLMPRSQIDIF 120

Query: 659  VQVLQADGGTRSACINAATLALADAGIPMRDIVTSCSAGYLNSTPLLDLNYIEDSAGGPD 480
            VQVLQADGGTRSACINAATLALADAGIPMRD+VTSCSAGYLNSTPLLDLNY+EDSAGGPD
Sbjct: 121  VQVLQADGGTRSACINAATLALADAGIPMRDLVTSCSAGYLNSTPLLDLNYVEDSAGGPD 180

Query: 479  VTVGILSKLDKVTLLQMDAKLPMDIFENVMQLAGEGCKAIANYIREVLLENTKQLEHRRG 300
            VTVGIL KLDKVTLLQMDAKLPMDIFENVMQLA EGCKAIANYIREVLLENTKQLE+RRG
Sbjct: 181  VTVGILPKLDKVTLLQMDAKLPMDIFENVMQLAIEGCKAIANYIREVLLENTKQLEYRRG 240


>ref|XP_002530509.1| Exosome complex exonuclease RRP41, putative [Ricinus communis]
            gi|223529966|gb|EEF31893.1| Exosome complex exonuclease
            RRP41, putative [Ricinus communis]
          Length = 241

 Score =  441 bits (1135), Expect = e-121
 Identities = 221/241 (91%), Positives = 234/241 (97%)
 Frame = -3

Query: 1019 MEFVSPEGLRLDGRRPMEMRQIRAEIGAVSKADGSAVFEMGNTKVIAAVYGPREVQNRGQ 840
            ME+VSPEGLRLDGRRPMEMRQ+RA+IGAVSKADGSAVFEMGNTKVIAAVYGPREVQNR Q
Sbjct: 1    MEYVSPEGLRLDGRRPMEMRQLRAQIGAVSKADGSAVFEMGNTKVIAAVYGPREVQNRSQ 60

Query: 839  QMNDQALVRCEYSMANFSTGDRMRKPKGDRRSIEISLVIRQTMEACIMTHLMPRSQIDIF 660
            Q+ DQALVRCEY+MANFSTGDRMRKPKGDRRS EISLVIRQTME CI+THLMPRSQIDI+
Sbjct: 61   QIIDQALVRCEYTMANFSTGDRMRKPKGDRRSTEISLVIRQTMEECILTHLMPRSQIDIY 120

Query: 659  VQVLQADGGTRSACINAATLALADAGIPMRDIVTSCSAGYLNSTPLLDLNYIEDSAGGPD 480
            VQVLQADGGTRSACINAATLALADAGIPMRD+VTSCSAGYLNSTPLLDLNY+EDSAGGPD
Sbjct: 121  VQVLQADGGTRSACINAATLALADAGIPMRDLVTSCSAGYLNSTPLLDLNYVEDSAGGPD 180

Query: 479  VTVGILSKLDKVTLLQMDAKLPMDIFENVMQLAGEGCKAIANYIREVLLENTKQLEHRRG 300
            VTVGIL KLDKVTLLQMDAKLP+D FENVMQLA EGCKAIANYIRE+LLENTKQLE+RRG
Sbjct: 181  VTVGILPKLDKVTLLQMDAKLPIDTFENVMQLAVEGCKAIANYIREILLENTKQLEYRRG 240

Query: 299  V 297
            +
Sbjct: 241  L 241


>ref|XP_003549686.1| PREDICTED: exosome complex component RRP41-like [Glycine max]
          Length = 241

 Score =  441 bits (1133), Expect = e-121
 Identities = 221/241 (91%), Positives = 234/241 (97%)
 Frame = -3

Query: 1019 MEFVSPEGLRLDGRRPMEMRQIRAEIGAVSKADGSAVFEMGNTKVIAAVYGPREVQNRGQ 840
            ME+VSPEGLRLDGRRPMEMRQIRAEIGAVSKADGSA+FEMGNTKVIAAVYGPREVQNR Q
Sbjct: 1    MEYVSPEGLRLDGRRPMEMRQIRAEIGAVSKADGSAIFEMGNTKVIAAVYGPREVQNRNQ 60

Query: 839  QMNDQALVRCEYSMANFSTGDRMRKPKGDRRSIEISLVIRQTMEACIMTHLMPRSQIDIF 660
            Q++  ALVRCEYSMANFSTGDRMRKPKGDRRS EISLVIRQTMEACI+THL+PRSQIDI+
Sbjct: 61   QISSHALVRCEYSMANFSTGDRMRKPKGDRRSTEISLVIRQTMEACILTHLLPRSQIDIY 120

Query: 659  VQVLQADGGTRSACINAATLALADAGIPMRDIVTSCSAGYLNSTPLLDLNYIEDSAGGPD 480
            VQVLQADGGTRSACINAATLALADAGIPMRD+VTSCSAGYLNSTPLLDLNY+EDSAGGPD
Sbjct: 121  VQVLQADGGTRSACINAATLALADAGIPMRDLVTSCSAGYLNSTPLLDLNYVEDSAGGPD 180

Query: 479  VTVGILSKLDKVTLLQMDAKLPMDIFENVMQLAGEGCKAIANYIREVLLENTKQLEHRRG 300
            VT+GIL KLDKVTLLQMD+KLP+DI ENVMQLA EGCKAIANYIREVLLENTKQLE+RRG
Sbjct: 181  VTLGILPKLDKVTLLQMDSKLPIDILENVMQLAIEGCKAIANYIREVLLENTKQLEYRRG 240

Query: 299  V 297
            V
Sbjct: 241  V 241


>ref|XP_003626533.1| Exosome complex exonuclease RRP41 [Medicago truncatula]
            gi|355501548|gb|AES82751.1| Exosome complex exonuclease
            RRP41 [Medicago truncatula]
          Length = 241

 Score =  439 bits (1129), Expect = e-121
 Identities = 220/240 (91%), Positives = 232/240 (96%)
 Frame = -3

Query: 1019 MEFVSPEGLRLDGRRPMEMRQIRAEIGAVSKADGSAVFEMGNTKVIAAVYGPREVQNRGQ 840
            ME+VSPEGLR DGRRPMEMRQIRAEIGAVSKADGSA+FEMGNTKVIAAVYGPREVQNR Q
Sbjct: 1    MEYVSPEGLRSDGRRPMEMRQIRAEIGAVSKADGSAIFEMGNTKVIAAVYGPREVQNRSQ 60

Query: 839  QMNDQALVRCEYSMANFSTGDRMRKPKGDRRSIEISLVIRQTMEACIMTHLMPRSQIDIF 660
            QM+D+ALVRCEYSMANFSTGDRMRKPKGDRRS EISLVIRQTME CI+THLMPRSQIDI+
Sbjct: 61   QMSDKALVRCEYSMANFSTGDRMRKPKGDRRSTEISLVIRQTMEECILTHLMPRSQIDIY 120

Query: 659  VQVLQADGGTRSACINAATLALADAGIPMRDIVTSCSAGYLNSTPLLDLNYIEDSAGGPD 480
            VQVLQADGGTRSACINAATLALADAGIPM D+VTSCSAGYLNSTPLLDLNY+EDSAGGPD
Sbjct: 121  VQVLQADGGTRSACINAATLALADAGIPMLDLVTSCSAGYLNSTPLLDLNYVEDSAGGPD 180

Query: 479  VTVGILSKLDKVTLLQMDAKLPMDIFENVMQLAGEGCKAIANYIREVLLENTKQLEHRRG 300
            VTVGIL KLDKVTLLQMD+KLP+DI ENVMQLA EGCKAIANYIRE+LLENTKQLE+RRG
Sbjct: 181  VTVGILPKLDKVTLLQMDSKLPIDILENVMQLATEGCKAIANYIREILLENTKQLEYRRG 240


>ref|XP_002320845.1| predicted protein [Populus trichocarpa] gi|118489833|gb|ABK96716.1|
            unknown [Populus trichocarpa x Populus deltoides]
            gi|222861618|gb|EEE99160.1| predicted protein [Populus
            trichocarpa]
          Length = 241

 Score =  437 bits (1123), Expect = e-120
 Identities = 219/241 (90%), Positives = 233/241 (96%)
 Frame = -3

Query: 1019 MEFVSPEGLRLDGRRPMEMRQIRAEIGAVSKADGSAVFEMGNTKVIAAVYGPREVQNRGQ 840
            MEFV+PEGLRLDGRRPMEMRQ+RA+IGAV+KADGSAVFEMGNTKVIAAVYGPREVQNR Q
Sbjct: 1    MEFVNPEGLRLDGRRPMEMRQLRAQIGAVAKADGSAVFEMGNTKVIAAVYGPREVQNRSQ 60

Query: 839  QMNDQALVRCEYSMANFSTGDRMRKPKGDRRSIEISLVIRQTMEACIMTHLMPRSQIDIF 660
            Q+NDQALVRCEYSMANFSTGDR RKPKGDRRS EISLVIRQ ME CI+T+LMPRSQIDI+
Sbjct: 61   QINDQALVRCEYSMANFSTGDRRRKPKGDRRSTEISLVIRQAMEECILTNLMPRSQIDIY 120

Query: 659  VQVLQADGGTRSACINAATLALADAGIPMRDIVTSCSAGYLNSTPLLDLNYIEDSAGGPD 480
            VQVLQADGGTRSACINAATLALADAGIPMRD+VTSCSAG+LNSTPLLDLNY+EDSAGGPD
Sbjct: 121  VQVLQADGGTRSACINAATLALADAGIPMRDLVTSCSAGFLNSTPLLDLNYVEDSAGGPD 180

Query: 479  VTVGILSKLDKVTLLQMDAKLPMDIFENVMQLAGEGCKAIANYIREVLLENTKQLEHRRG 300
            VTVGIL KLDKVTLLQMDAKLP+D FENVMQLA EGCKAIANYIREVLLENTKQLE+RRG
Sbjct: 181  VTVGILPKLDKVTLLQMDAKLPIDTFENVMQLAVEGCKAIANYIREVLLENTKQLEYRRG 240

Query: 299  V 297
            +
Sbjct: 241  L 241