BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00016726
         (1530 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002284795.1| PREDICTED: F-box protein SKIP23-like [Vitis ...   425   e-116
emb|CAN69116.1| hypothetical protein VITISV_031843 [Vitis vinifera]   424   e-116
ref|XP_002300674.1| predicted protein [Populus trichocarpa] gi|2...   416   e-113
ref|XP_002510618.1| ubiquitin-protein ligase, putative [Ricinus ...   405   e-110
ref|XP_003523538.1| PREDICTED: F-box protein SKIP23-like [Glycin...   371   e-100

>ref|XP_002284795.1| PREDICTED: F-box protein SKIP23-like [Vitis vinifera]
          Length = 389

 Score =  425 bits (1092), Expect = e-116
 Identities = 214/389 (55%), Positives = 268/389 (68%), Gaps = 5/389 (1%)
 Frame = -1

Query: 1380 WTYLPPELLQIIATKLTIYKDYLQFRAVCISWRSSVPLRPRHLPCQLPWLMLPSGLNTGN 1201
            W+ L PELL  IA K  IY DY++FRAVC +WR+SVP  P HLP QLPWLMLP       
Sbjct: 4    WSQLHPELLDFIAKKFKIYTDYVRFRAVCHNWRASVPKTPHHLPTQLPWLMLPQSQPHHT 63

Query: 1200 IRAFFDLSDRIFHRLELP-GTRRKRCCGSSNGWLVLVEENPIIYLLNPLTREQLQLPPIT 1024
             R FF LS   FH L+LP  + R+R  GSS+GWL++++E P I+LLNPLTR ++ LPP++
Sbjct: 64   HRPFFSLSLNKFHFLQLPEASHRRRRRGSSHGWLLILDEAPEIFLLNPLTRSKVHLPPLS 123

Query: 1023 TFPKVVDFNVCQVGKEYLLENKLSGNTYWRDLNSMRNGFIKKVVLSSSPLD-EDYIAVAI 847
            TFP VV FN   VG+EY L    SG+ Y R L  MR+ FIKK +LSSSP +  D+IAV I
Sbjct: 124  TFPNVVRFNFADVGREYALRTS-SGDVYTRSLKKMRDSFIKKTILSSSPANGSDFIAVVI 182

Query: 846  LSETGELAFCKKGGNDWSMIDEAQCYGEDVIYHNGLFYAVSKKGAVAVFDLGGNSPLTTV 667
            L++TG+LA C+K  + W+ +++AQ Y EDVI+H GLFYAV+K G++AV D+ G+SP  ++
Sbjct: 183  LNQTGDLALCRKSDDSWTFLEDAQSYAEDVIFHRGLFYAVNKYGSIAVCDVSGSSPRVSI 242

Query: 666  IPPGTQFGGDILYLVVSNGELFLVARYLNLVGDIEPD---LIYLTVGFEVFKLDSSDLNW 496
            I    QFGGD+ YLV S  EL LV RYL+L  D+EPD   LIY T  F+V +LD     W
Sbjct: 243  IEMPQQFGGDLQYLVESGEELLLVTRYLDLTYDVEPDQTSLIYRTTRFQVCRLDLKAPRW 302

Query: 495  APVKNLGDRMFFLGGNSSLCLLASDFQGCEGNCIYFTDDYVEANDDGARGNHDVGIFRLE 316
              V +LGDR  FLG N SL L + DF GC+GNCIY+TDDY E N DG  G  D+GIF LE
Sbjct: 303  EVVSSLGDRALFLGENLSLSLSSVDFPGCKGNCIYYTDDYSEDNYDGIGGEQDLGIFNLE 362

Query: 315  DDGIEPLPCWTGHSRMIWPPHIWVTPSPC 229
            D  IEPLPC   H R+ WPP +WVTP+PC
Sbjct: 363  DGSIEPLPC--SHFRIRWPPPLWVTPNPC 389


>emb|CAN69116.1| hypothetical protein VITISV_031843 [Vitis vinifera]
          Length = 389

 Score =  424 bits (1090), Expect = e-116
 Identities = 214/389 (55%), Positives = 268/389 (68%), Gaps = 5/389 (1%)
 Frame = -1

Query: 1380 WTYLPPELLQIIATKLTIYKDYLQFRAVCISWRSSVPLRPRHLPCQLPWLMLPSGLNTGN 1201
            W+ L PELL  IA K  IY DY++FRAVC +WR+SVP  P HLP QLPWLMLP       
Sbjct: 4    WSQLHPELLDFIAKKFKIYTDYVRFRAVCHNWRASVPKTPHHLPTQLPWLMLPQSQPHHT 63

Query: 1200 IRAFFDLSDRIFHRLELP-GTRRKRCCGSSNGWLVLVEENPIIYLLNPLTREQLQLPPIT 1024
             R FF LS   FH L+LP  + R+R  GSS+GWL++++E P I+LLNPLTR ++ LPP++
Sbjct: 64   HRPFFSLSLNKFHFLQLPEASHRRRRRGSSHGWLLILDEAPEIFLLNPLTRSKVHLPPLS 123

Query: 1023 TFPKVVDFNVCQVGKEYLLENKLSGNTYWRDLNSMRNGFIKKVVLSSSPLD-EDYIAVAI 847
            TFP VV FN   VG+EY L    SG+ Y R L  MR+ FIKK +LSSSP +  D+IAV I
Sbjct: 124  TFPNVVRFNFADVGREYALRTS-SGDVYTRSLKKMRDSFIKKTILSSSPANGSDFIAVVI 182

Query: 846  LSETGELAFCKKGGNDWSMIDEAQCYGEDVIYHNGLFYAVSKKGAVAVFDLGGNSPLTTV 667
            L++TG+LA C+K  + W+ +++AQ Y EDVI+H GLFYAV+K G++AV D+ G+SP  ++
Sbjct: 183  LNQTGDLALCRKSDDSWTFLEDAQSYSEDVIFHRGLFYAVNKYGSIAVCDVSGSSPRVSI 242

Query: 666  IPPGTQFGGDILYLVVSNGELFLVARYLNLVGDIEPD---LIYLTVGFEVFKLDSSDLNW 496
            I    QFGGD+ YLV S  EL LV RYL+L  D+E D   LIY T  F+V +LDS    W
Sbjct: 243  IEMPQQFGGDLQYLVESGEELLLVTRYLDLTYDVEXDQTSLIYRTTRFQVCRLDSKAPRW 302

Query: 495  APVKNLGDRMFFLGGNSSLCLLASDFQGCEGNCIYFTDDYVEANDDGARGNHDVGIFRLE 316
              V +LGDR  FLG N SL L + DF GC+GNCIY+TDDY E N DG  G  D+GIF LE
Sbjct: 303  EVVSSLGDRALFLGENLSLSLSSVDFPGCKGNCIYYTDDYSEDNYDGIGGEQDLGIFNLE 362

Query: 315  DDGIEPLPCWTGHSRMIWPPHIWVTPSPC 229
            D  IEPLPC   H R+ WPP +WVTP+PC
Sbjct: 363  DGSIEPLPC--SHFRIRWPPPLWVTPNPC 389


>ref|XP_002300674.1| predicted protein [Populus trichocarpa] gi|222842400|gb|EEE79947.1|
            predicted protein [Populus trichocarpa]
          Length = 393

 Score =  416 bits (1068), Expect = e-113
 Identities = 209/396 (52%), Positives = 275/396 (69%), Gaps = 8/396 (2%)
 Frame = -1

Query: 1392 MDVPWTYLPPELLQIIATKLTIYKDYLQFRAVCISWRSSVPLRPRHLPCQLPWLMLP-SG 1216
            M V WT LPPEL++II+ K+TIY DYL F+AVC +W+SS+P  P HLP QLPWL+LP S 
Sbjct: 1    MAVDWTQLPPELIEIISKKITIYSDYLHFQAVCHAWKSSIPKTPNHLPPQLPWLLLPQSQ 60

Query: 1215 LNTGNIRAFFDLSDRIFHRLELP-GTRRKRCCGSSNGWLVLVEENPIIYLLNPLTREQLQ 1039
             N  + RAFF+LS   FH L LP  + RK+ CGSS+GWL++++++P I ++NPLTR ++ 
Sbjct: 61   SNQSSYRAFFNLSTYKFHSLNLPEASHRKKHCGSSHGWLIILDDSPSILVINPLTRRKIH 120

Query: 1038 LPPITTFPKVVDFNVCQVGKEYLLENKLSGNTYWRDLNSMRNGFIKKVVLSSSPLDED-- 865
            LP I++FP VV F+   VG+EYLL N   G      L  MR+GFIKKVV+SSSPL++   
Sbjct: 121  LPAISSFPNVVSFDYANVGREYLLVNP-QGERNTASLRQMRDGFIKKVVMSSSPLEKKGD 179

Query: 864  -YIAVAILSETGELAFCKKGGNDWSMIDEAQCYGEDVIYHNGLFYAVSKKGAVAVFDLGG 688
             ++A+AIL  TG+LA+CK G   W++++ ++ + EDVIY NGLFYAV+K G + V D+ G
Sbjct: 180  FFVAMAILCSTGDLAYCKNGDECWNIVENSRSFSEDVIYFNGLFYAVNKAGQIVVCDVNG 239

Query: 687  NSPLTTVIPPGTQFGGDILYLVVSNGELFLVARYLNLVGDIEPDL-IYLTVGFEVFKLDS 511
            NSP  + I    Q GGD+ YLV S   L LV RYL+L  D+E D+ IY T  FEVFKLD 
Sbjct: 240  NSPKVSFIETPRQIGGDMQYLVSSGDGLLLVTRYLDL--DVEFDIFIYKTARFEVFKLDL 297

Query: 510  SDLNWAPVKNLGDRMFFLGGNSSLCLLASDFQGCEGNCIYFTDDYVEANDDGARGNHDVG 331
            +   W  V +LGD M F+G NSSL L AS   GC G+CIY+TDDY   N DG  G HD+G
Sbjct: 298  NGPRWERVTSLGDMMLFIGENSSLALSASGLSGCMGDCIYYTDDYSANNYDGHIGEHDLG 357

Query: 330  IFRLEDDGIEPLPCW--TGHSRMIWPPHIWVTPSPC 229
            IF+L D  IEPLPC+    +SR+ WPP +W++P+PC
Sbjct: 358  IFKLSDGSIEPLPCYPRNSYSRLQWPPPLWISPNPC 393


>ref|XP_002510618.1| ubiquitin-protein ligase, putative [Ricinus communis]
            gi|223551319|gb|EEF52805.1| ubiquitin-protein ligase,
            putative [Ricinus communis]
          Length = 398

 Score =  405 bits (1041), Expect = e-110
 Identities = 203/399 (50%), Positives = 273/399 (68%), Gaps = 11/399 (2%)
 Frame = -1

Query: 1392 MDVPWTYLPPELLQIIATKLTIYKDYLQFRAVCISWRSSVPLRPRHLPCQLPWLMLPSGL 1213
            M + W+ LPPEL++II+  LTIY DYL  RAVC +WR S+P  P HLP QLPWLMLP   
Sbjct: 1    MIMDWSQLPPELIEIISKGLTIYSDYLYSRAVCHAWRFSIPKTPNHLPPQLPWLMLPQSQ 60

Query: 1212 NTGNI--RAFFDLSDRIFHRLELPGTR-RKRCCGSSNGWLVLVEENPIIYLLNPLTREQL 1042
            +  N   RAFF LS   FH L LP    RKR CGSS+GWL+++++ P I L+NPLTR +L
Sbjct: 61   SQSNQSRRAFFSLSTNKFHFLNLPEVSYRKRHCGSSHGWLMILDDTPTILLINPLTRAKL 120

Query: 1041 QLPPITTFPKVVDFNVCQVGKEYLLENKLSGNTYWRDLNSMRNGFIKKVVLSSSPL-DED 865
             LPP+++FP V+ FN   +G+EY L N L G      L  MR+ FI+KVVLSSSPL D +
Sbjct: 121  SLPPLSSFPNVISFNYSDIGREYALRNLL-GERVTVSLRQMRDSFIRKVVLSSSPLKDNN 179

Query: 864  YIAVAILSETGELAFCKKGGNDWSMIDEAQCYGEDVIYHNGLFYAVSKKGAVAVFDLGGN 685
            ++ +AIL++T +LA+C+ G   WS+++ A+ + EDVI+ NG+FYAV+K G + + D+  +
Sbjct: 180  FVVIAILNQTDDLAYCRNGDKSWSLVENARSFCEDVIFVNGMFYAVNKAGQIVICDISSD 239

Query: 684  SPLTTVIPPGTQFGGDILYLVVSNGELFLVARYLNLV-----GDIEPDLIYLTVGFEVFK 520
            SP  + +    Q GGD+ YLV S  EL LV RYL+L       D+EP LIY T+ FEVF+
Sbjct: 240  SPRVSFMETPRQAGGDMQYLVNSGDELLLVTRYLDLEYEFDHPDMEPHLIYRTIRFEVFR 299

Query: 519  LDSSDLNWAPVKNLGDRMFFLGGNSSLCLLASDFQGCEGNCIYFTDDYVEANDDGARGNH 340
            LD +   W  +  LGD+  F+G NSSL L A+DF GC GNCIY+TDDY++AN DG  G+H
Sbjct: 300  LDWNGPQWLRMSTLGDKALFIGENSSLSLSATDFSGCMGNCIYYTDDYLDANYDGHFGDH 359

Query: 339  DVGIFRLEDDGIEPLPCWTGH--SRMIWPPHIWVTPSPC 229
            D+GIF+L D+ IEPLPC+  +  S + W P +WV+P+PC
Sbjct: 360  DLGIFKLCDETIEPLPCYPRNFTSPLQWSPPLWVSPNPC 398


>ref|XP_003523538.1| PREDICTED: F-box protein SKIP23-like [Glycine max]
          Length = 393

 Score =  371 bits (953), Expect = e-100
 Identities = 208/404 (51%), Positives = 263/404 (65%), Gaps = 16/404 (3%)
 Frame = -1

Query: 1392 MDVPWTYLPPELLQIIATKLTIYKDYLQFRAVCISWRSSVPLRPRHLPCQLPWLMLPSGL 1213
            M V W  LPPELL+ I+  LTIY DYL+FR+VC SWRSSVP  P HLP QLPWLML    
Sbjct: 1    MGVEWGELPPELLESISKTLTIYVDYLRFRSVCRSWRSSVPKIPLHLPPQLPWLMLSR-- 58

Query: 1212 NTGNIRAFFDLSDRIFHRLELPGTRRKRCCGSSNGWLVLVEENPIIYLLNPLTREQLQLP 1033
                 RAFFDLS    H L    + R R CGSS+GWLV+++E P I LLNPLTR    LP
Sbjct: 59   -----RAFFDLSLNKTHLLNPQPSHRTRICGSSHGWLVMLDETPQIRLLNPLTRATRPLP 113

Query: 1032 PITTFPKVVDFNVCQVGKEYLLENKLSGNTYWRDLNSMRNGFIKKVVLSSSP-LDEDYIA 856
            P+  FP VV F+   VG+EYL++N   G  Y  +L  M N F+ KVVLS+SP L++D+ A
Sbjct: 114  PLHAFPNVVAFDHANVGREYLIQNPYGG-LYAFNLRQMCNSFLGKVVLSASPTLNDDFAA 172

Query: 855  VAILSETGELAFCKKGGNDWSMI----DEAQCYGEDVIYHNGLFYAVSKKGAVAVFDLGG 688
            +AI+ +   LAFC+ G + W  +    +E  C+ EDV+ +NGLF+AVSK G +AV D G 
Sbjct: 173  LAIVGQNN-LAFCRNGYDSWIFLNGEEEEMNCW-EDVVNYNGLFFAVSKGGTIAVCDAGE 230

Query: 687  NS--PLTTVIPPGTQFG--GDILYLVVSNGELFLVARYLNL-----VGDIEPDLIYLTVG 535
                P  ++I   T FG  GDI Y V S G++ L+ R L+       G+ E DL+Y TVG
Sbjct: 231  GCFPPRVSIIQTTTPFGFAGDIHYAVFSAGDMLLLIRVLDQDFSDHAGE-ESDLVYRTVG 289

Query: 534  FEVFKLDSSDLNWAPVKNLGDRMFFLGGNSSLCLLASDFQGCEGNCIYFTDDYVEANDDG 355
            FEVFK++   L W  V+ LG+R+ F+GGNSSL   ASDF GC  +CIYFTDDY E+NDD 
Sbjct: 290  FEVFKMNWGLLTWQRVETLGERVLFVGGNSSLSFCASDFVGCSADCIYFTDDYSESNDDD 349

Query: 354  ARGNHDVGIFRLEDDGIEPLPCWTGH--SRMIWPPHIWVTPSPC 229
            A G HD+G+FRL D  IEPLPC+  +  SR+ WP  IWV+P+PC
Sbjct: 350  ACGKHDLGVFRLRDKSIEPLPCFNQNSCSRLRWPLPIWVSPNPC 393