BLASTX nr result

ID: Cimicifuga21_contig00016715 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00016715
         (505 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002274634.1| PREDICTED: uncharacterized protein LOC100255...   143   2e-32
emb|CAN61825.1| hypothetical protein VITISV_027627 [Vitis vinifera]   142   2e-32
ref|XP_002522389.1| conserved hypothetical protein [Ricinus comm...   140   8e-32
ref|XP_002310190.1| predicted protein [Populus trichocarpa] gi|2...   140   1e-31
emb|CBI38355.3| unnamed protein product [Vitis vinifera]              136   2e-30

>ref|XP_002274634.1| PREDICTED: uncharacterized protein LOC100255767 [Vitis vinifera]
          Length = 163

 Score =  143 bits (360), Expect = 2e-32
 Identities = 84/154 (54%), Positives = 98/154 (63%)
 Frame = +2

Query: 2   KLILQDGELQEFPYPVKVSNLLQKHPSSFICNSDEMEFEDFVSAMCADEELLPGRLYFAL 181
           KLILQDG L+EF YPVKVS +LQK+PS FICNSDEM+F+D VSA+  DEEL PG+LYFAL
Sbjct: 16  KLILQDGRLEEFSYPVKVSYVLQKNPSCFICNSDEMDFDDVVSAIHDDEELQPGQLYFAL 75

Query: 182 PLRRLKYPLQPEEMAALAVKASLALMKSGNGGSDNSGFCLKGADQMISTGYDGKERRRLS 361
           PL RLK PLQ EEMAALAVKAS ALMKSG         C      +    + G++  + S
Sbjct: 76  PLSRLKQPLQAEEMAALAVKASSALMKSGGDK------CRCRRKSLSPAMFSGEKDSKSS 129

Query: 362 GDVCSVGGAVKKSRSGCKGRRSNFAPNKLTVIPE 463
           G V   GG     R G  G     +   L+ IPE
Sbjct: 130 GRVAPGGGVEGGLRRGRNGGGRRNSARLLSSIPE 163


>emb|CAN61825.1| hypothetical protein VITISV_027627 [Vitis vinifera]
          Length = 163

 Score =  142 bits (359), Expect = 2e-32
 Identities = 84/154 (54%), Positives = 98/154 (63%)
 Frame = +2

Query: 2   KLILQDGELQEFPYPVKVSNLLQKHPSSFICNSDEMEFEDFVSAMCADEELLPGRLYFAL 181
           KLILQDG L+EF YPVKVS +LQK+PS FICNSDEM+F+D VSA+  DEEL PG+LYFAL
Sbjct: 16  KLILQDGRLEEFSYPVKVSYVLQKNPSCFICNSDEMDFDDVVSAIHDDEELQPGQLYFAL 75

Query: 182 PLRRLKYPLQPEEMAALAVKASLALMKSGNGGSDNSGFCLKGADQMISTGYDGKERRRLS 361
           PL RLK PLQ EEMAALAVKAS ALMKSG         C      +    + G++  + S
Sbjct: 76  PLSRLKQPLQAEEMAALAVKASSALMKSGGDK------CRCRRKSLSPVMFXGEKDSKSS 129

Query: 362 GDVCSVGGAVKKSRSGCKGRRSNFAPNKLTVIPE 463
           G V   GG     R G  G     +   L+ IPE
Sbjct: 130 GRVAPGGGVEGGLRRGRNGGGRRNSARLLSSIPE 163


>ref|XP_002522389.1| conserved hypothetical protein [Ricinus communis]
           gi|223538467|gb|EEF40073.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 162

 Score =  140 bits (354), Expect = 8e-32
 Identities = 86/155 (55%), Positives = 104/155 (67%), Gaps = 1/155 (0%)
 Frame = +2

Query: 2   KLILQDGELQEFPYPVKVSNLLQK-HPSSFICNSDEMEFEDFVSAMCADEELLPGRLYFA 178
           KLILQDG LQEF YPVKVS +L K +P+ FICN+DEMEF+D VSA+  DE L PG+LYFA
Sbjct: 16  KLILQDGRLQEFSYPVKVSYVLSKINPTYFICNADEMEFDDVVSAINDDELLQPGQLYFA 75

Query: 179 LPLRRLKYPLQPEEMAALAVKASLALMKSGNGGSDNSGFCLKGADQMISTGYDGKERRRL 358
           LPL RLK+PLQPEEMAALAVKAS ALMKS N    +   C + A   + +G DGK  RR+
Sbjct: 76  LPLSRLKHPLQPEEMAALAVKASSALMKSTNYNGADKITCRRKA---VYSG-DGKSSRRV 131

Query: 359 SGDVCSVGGAVKKSRSGCKGRRSNFAPNKLTVIPE 463
           +    S GG     R   +G+ +      L+ IPE
Sbjct: 132 AASATSGGGDGGSRRGAGRGKFTAM----LSAIPE 162


>ref|XP_002310190.1| predicted protein [Populus trichocarpa] gi|222853093|gb|EEE90640.1|
           predicted protein [Populus trichocarpa]
          Length = 154

 Score =  140 bits (353), Expect = 1e-31
 Identities = 90/154 (58%), Positives = 106/154 (68%)
 Frame = +2

Query: 2   KLILQDGELQEFPYPVKVSNLLQKHPSSFICNSDEMEFEDFVSAMCADEELLPGRLYFAL 181
           KLILQDG LQEF YPVKVS +L K P+ FICN+DEMEF+D VSA+  DEEL PG+LYFAL
Sbjct: 16  KLILQDGRLQEFSYPVKVSFVLAKIPTYFICNADEMEFDDVVSAINDDEELQPGQLYFAL 75

Query: 182 PLRRLKYPLQPEEMAALAVKASLALMKSGNGGSDNSGFCLKGADQMISTGYDGKERRRLS 361
           PL  LK+PLQPEEMAALAVKAS ALMKS  GG++  G C K    + S   DGK  RR  
Sbjct: 76  PLSWLKHPLQPEEMAALAVKASSALMKS--GGAEKCG-CHK--KLVFSVENDGKSSRR-- 128

Query: 362 GDVCSVGGAVKKSRSGCKGRRSNFAPNKLTVIPE 463
             V + GG  +  R+G +G+ S     +L  IPE
Sbjct: 129 --VAAGGGGPR--RNGGRGKFS----ARLGAIPE 154


>emb|CBI38355.3| unnamed protein product [Vitis vinifera]
          Length = 194

 Score =  136 bits (343), Expect = 2e-30
 Identities = 81/138 (58%), Positives = 94/138 (68%)
 Frame = +2

Query: 2   KLILQDGELQEFPYPVKVSNLLQKHPSSFICNSDEMEFEDFVSAMCADEELLPGRLYFAL 181
           KLILQDG L+EF YPVKVS +LQK+PS FICNSDEM+F+D VSA+  DEEL PG+LYFAL
Sbjct: 16  KLILQDGRLEEFSYPVKVSYVLQKNPSCFICNSDEMDFDDVVSAIHDDEELQPGQLYFAL 75

Query: 182 PLRRLKYPLQPEEMAALAVKASLALMKSGNGGSDNSGFCLKGADQMISTGYDGKERRRLS 361
           PL RLK PLQ EEMAALAVKAS ALMKSG         C      +    + G++  + S
Sbjct: 76  PLSRLKQPLQAEEMAALAVKASSALMKSGGDK------CRCRRKSLSPVMFAGEKDSKSS 129

Query: 362 GDVCSVGGAVKKSRSGCK 415
           G V + GG   KS S  K
Sbjct: 130 GRV-APGGEQGKSPSTTK 146


Top