BLASTX nr result

ID: Cimicifuga21_contig00016686 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00016686
         (687 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_565717.2| cysteinyl-tRNA synthetase [Arabidopsis thaliana...    83   1e-27
gb|AAK43958.1|AF370143_1 putative cysteinyl-tRNA synthetase [Ara...    83   1e-27
ref|NP_001077986.1| cysteinyl-tRNA synthetase [Arabidopsis thali...    83   1e-27
dbj|BAF01956.1| putative cysteinyl-tRNA synthetase [Arabidopsis ...    83   1e-27
ref|XP_002881161.1| tRNA synthetase class I (C) family protein [...    82   3e-27

>ref|NP_565717.2| cysteinyl-tRNA synthetase [Arabidopsis thaliana]
           gi|330253408|gb|AEC08502.1| cysteinyl-tRNA synthetase
           [Arabidopsis thaliana]
          Length = 563

 Score = 83.2 bits (204), Expect(2) = 1e-27
 Identities = 40/58 (68%), Positives = 51/58 (87%)
 Frame = -3

Query: 685 SLSALEKETRSVLSVLGLMPASYAEVLQQLREKALKRAGLREDEVLQKIEERTIARKN 512
           SL ALE   R VL++LGLMP SY+EVL+QL+EKALKRAGL+E++VLQ+++ERT ARKN
Sbjct: 461 SLKALETTIRDVLTILGLMPTSYSEVLEQLKEKALKRAGLKEEDVLQRVQERTDARKN 518



 Score = 65.9 bits (159), Expect(2) = 1e-27
 Identities = 30/41 (73%), Positives = 34/41 (82%)
 Frame = -1

Query: 516 KTIEYEKSDAIRKELGEVGIALMDGPAGTFWRPTVPLALQE 394
           K  EYE+SDAIRK+L +VGIALMD P GT WRP +PLALQE
Sbjct: 517 KNKEYERSDAIRKDLAKVGIALMDSPEGTTWRPAIPLALQE 557


>gb|AAK43958.1|AF370143_1 putative cysteinyl-tRNA synthetase [Arabidopsis thaliana]
           gi|15293251|gb|AAK93736.1| putative cysteinyl-tRNA
           synthetase [Arabidopsis thaliana]
           gi|20197327|gb|AAM15026.1| putative cysteinyl-tRNA
           synthetase [Arabidopsis thaliana]
           gi|20197896|gb|AAD20662.2| putative cysteinyl-tRNA
           synthetase [Arabidopsis thaliana]
          Length = 493

 Score = 83.2 bits (204), Expect(2) = 1e-27
 Identities = 40/58 (68%), Positives = 51/58 (87%)
 Frame = -3

Query: 685 SLSALEKETRSVLSVLGLMPASYAEVLQQLREKALKRAGLREDEVLQKIEERTIARKN 512
           SL ALE   R VL++LGLMP SY+EVL+QL+EKALKRAGL+E++VLQ+++ERT ARKN
Sbjct: 391 SLKALETTIRDVLTILGLMPTSYSEVLEQLKEKALKRAGLKEEDVLQRVQERTDARKN 448



 Score = 65.9 bits (159), Expect(2) = 1e-27
 Identities = 30/41 (73%), Positives = 34/41 (82%)
 Frame = -1

Query: 516 KTIEYEKSDAIRKELGEVGIALMDGPAGTFWRPTVPLALQE 394
           K  EYE+SDAIRK+L +VGIALMD P GT WRP +PLALQE
Sbjct: 447 KNKEYERSDAIRKDLAKVGIALMDSPEGTTWRPAIPLALQE 487


>ref|NP_001077986.1| cysteinyl-tRNA synthetase [Arabidopsis thaliana]
           gi|330253409|gb|AEC08503.1| cysteinyl-tRNA synthetase
           [Arabidopsis thaliana]
          Length = 401

 Score = 83.2 bits (204), Expect(2) = 1e-27
 Identities = 40/58 (68%), Positives = 51/58 (87%)
 Frame = -3

Query: 685 SLSALEKETRSVLSVLGLMPASYAEVLQQLREKALKRAGLREDEVLQKIEERTIARKN 512
           SL ALE   R VL++LGLMP SY+EVL+QL+EKALKRAGL+E++VLQ+++ERT ARKN
Sbjct: 299 SLKALETTIRDVLTILGLMPTSYSEVLEQLKEKALKRAGLKEEDVLQRVQERTDARKN 356



 Score = 65.9 bits (159), Expect(2) = 1e-27
 Identities = 30/41 (73%), Positives = 34/41 (82%)
 Frame = -1

Query: 516 KTIEYEKSDAIRKELGEVGIALMDGPAGTFWRPTVPLALQE 394
           K  EYE+SDAIRK+L +VGIALMD P GT WRP +PLALQE
Sbjct: 355 KNKEYERSDAIRKDLAKVGIALMDSPEGTTWRPAIPLALQE 395


>dbj|BAF01956.1| putative cysteinyl-tRNA synthetase [Arabidopsis thaliana]
          Length = 140

 Score = 83.2 bits (204), Expect(2) = 1e-27
 Identities = 40/58 (68%), Positives = 51/58 (87%)
 Frame = -3

Query: 685 SLSALEKETRSVLSVLGLMPASYAEVLQQLREKALKRAGLREDEVLQKIEERTIARKN 512
           SL ALE   R VL++LGLMP SY+EVL+QL+EKALKRAGL+E++VLQ+++ERT ARKN
Sbjct: 38  SLKALETTIRDVLTILGLMPTSYSEVLEQLKEKALKRAGLKEEDVLQRVQERTDARKN 95



 Score = 65.9 bits (159), Expect(2) = 1e-27
 Identities = 30/41 (73%), Positives = 34/41 (82%)
 Frame = -1

Query: 516 KTIEYEKSDAIRKELGEVGIALMDGPAGTFWRPTVPLALQE 394
           K  EYE+SDAIRK+L +VGIALMD P GT WRP +PLALQE
Sbjct: 94  KNKEYERSDAIRKDLAKVGIALMDSPEGTTWRPAIPLALQE 134


>ref|XP_002881161.1| tRNA synthetase class I (C) family protein [Arabidopsis lyrata
           subsp. lyrata] gi|297327000|gb|EFH57420.1| tRNA
           synthetase class I (C) family protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 562

 Score = 82.4 bits (202), Expect(2) = 3e-27
 Identities = 40/58 (68%), Positives = 50/58 (86%)
 Frame = -3

Query: 685 SLSALEKETRSVLSVLGLMPASYAEVLQQLREKALKRAGLREDEVLQKIEERTIARKN 512
           SL ALE   R VL++LGLMP SY+EVL+QL+EKALKRAGL E++VLQ+++ERT ARKN
Sbjct: 461 SLKALETTIRDVLTILGLMPTSYSEVLEQLKEKALKRAGLEEEDVLQRVQERTDARKN 518



 Score = 65.5 bits (158), Expect(2) = 3e-27
 Identities = 30/41 (73%), Positives = 33/41 (80%)
 Frame = -1

Query: 516 KTIEYEKSDAIRKELGEVGIALMDGPAGTFWRPTVPLALQE 394
           K  EYE+SDAIRK+L  VGIALMD P GT WRP +PLALQE
Sbjct: 517 KNKEYERSDAIRKDLASVGIALMDSPEGTTWRPAIPLALQE 557


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