BLASTX nr result

ID: Cimicifuga21_contig00016682 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00016682
         (1538 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002517554.1| signal transducer, putative [Ricinus communi...   548   e-153
ref|XP_002336081.1| predicted protein [Populus trichocarpa] gi|2...   540   e-151
ref|XP_002281013.1| PREDICTED: root phototropism protein 3 [Viti...   538   e-150
ref|XP_002303269.1| predicted protein [Populus trichocarpa] gi|2...   535   e-149
ref|XP_003531695.1| PREDICTED: root phototropism protein 3-like ...   526   e-147

>ref|XP_002517554.1| signal transducer, putative [Ricinus communis]
            gi|223543186|gb|EEF44718.1| signal transducer, putative
            [Ricinus communis]
          Length = 428

 Score =  548 bits (1412), Expect = e-153
 Identities = 284/431 (65%), Positives = 335/431 (77%), Gaps = 8/431 (1%)
 Frame = -1

Query: 1385 MKKLNSPEAIAIASMSVGQLAFECWFDDTSVLDMDYFIKTLSGIKEKGVRPDLIGSIITN 1206
            MKK++  +++     +  + A ECWFDD  +L+MDYF+KTL+GIK KGVRPDLIGSII +
Sbjct: 1    MKKISLQDSVTFPGKT-SEFAGECWFDDACILNMDYFVKTLAGIKAKGVRPDLIGSIIAH 59

Query: 1205 YASKWLPELSDEDTKQTPAIC--EESPGSVTAKWMKKRFFVETLVGVLPPEKDSVPCNFL 1032
            YASKWLPELS + T     +   EESP  VTA WMKKRFFVETLVGVLPPEKDS+PCNFL
Sbjct: 60   YASKWLPELSGDGTATERGLTNFEESPECVTASWMKKRFFVETLVGVLPPEKDSIPCNFL 119

Query: 1031 LRLLRTGAMVGIEPNYQIELEKRISWQLDQASLKELMVPSFSHTSGTVLDVELVLRLVKM 852
            LRLLRT  MVG+EP Y+ ELEKRISWQLDQASLKELM+PSFSHT GT+LDVEL++RLV+ 
Sbjct: 120  LRLLRTANMVGVEPTYRAELEKRISWQLDQASLKELMIPSFSHTCGTLLDVELMIRLVRR 179

Query: 851  FSNMDEVIKSG---AALVKVAKLVDSYLAEAAIDLNLALPEFFALAGALPSNARATDDGL 681
            F N+DE  KSG   AALVKVAKLVD YLAEAA+D +L+L EF  LA ALP +ARA DDGL
Sbjct: 180  FVNLDEAAKSGGGGAALVKVAKLVDCYLAEAAVDASLSLSEFDDLASALPGHARANDDGL 239

Query: 680  YRAVDTYLKVHPGTSKQERQNLCRLIDIRKLSSEASLHAAQNDRLPVRAVIQVLFSEQAR 501
            YRA+DTYLK HP  SKQER+ LCRLID RKLS EASLHAAQN+RLPVRAVIQVL SEQ +
Sbjct: 240  YRAIDTYLKAHPAASKQERKMLCRLIDSRKLSPEASLHAAQNERLPVRAVIQVLISEQNK 299

Query: 500  INRQFEWSGSFSGTRSPNPMLEPSGRCFSKREGNAQHMELKKLREDVHRLQAQCNFMQAQ 321
            +NRQ +WSGSFS  RSPNP  +P GRC+SKRE NAQ ME+KKLREDV RLQ QC+ MQ Q
Sbjct: 300  LNRQIDWSGSFS--RSPNPGFDPPGRCYSKREMNAQQMEIKKLREDVLRLQGQCHAMQMQ 357

Query: 320  IEKLVVKKKGFFRWMKLGVPSF--RPISIM-ERIDYSGGVASVGFEHQKPVNTNGKLVPG 150
            +E++V KKKGFFRW K G+ S     +S++ ++I+   G   +GF  Q PV+   KL+  
Sbjct: 358  MERMVEKKKGFFRWKKFGIISTFKSTVSVVDQKIEEGDGEGEIGFGRQTPVDMKTKLMKR 417

Query: 149  RNQKNWRKSVS 117
            R    WRKS+S
Sbjct: 418  RTPPRWRKSMS 428


>ref|XP_002336081.1| predicted protein [Populus trichocarpa] gi|222871395|gb|EEF08526.1|
            predicted protein [Populus trichocarpa]
          Length = 438

 Score =  540 bits (1390), Expect = e-151
 Identities = 278/431 (64%), Positives = 332/431 (77%), Gaps = 8/431 (1%)
 Frame = -1

Query: 1385 MKKLNSPEAIAIASMSVGQLAFECWFDDTSVLDMDYFIKTLSGIKEKGVRPDLIGSIITN 1206
            MK  + PE++  + +   Q A ECWFDD  +LDMDYF KTL+GIK KGVRPD IGSII +
Sbjct: 1    MKAASFPESVLSSGLKTSQFAAECWFDDACILDMDYFAKTLAGIKAKGVRPDFIGSIIAH 60

Query: 1205 YASKWLPELSDEDTKQTPAIC--EESPGSVTAKWMKKRFFVETLVGVLPPEKDSVPCNFL 1032
            YASKWLP+LS +       +   EESP SVTA WMKKRFFVETLVG+LPPEKDS+PC+FL
Sbjct: 61   YASKWLPDLSGDHLSSNKGLANFEESPESVTALWMKKRFFVETLVGILPPEKDSIPCSFL 120

Query: 1031 LRLLRTGAMVGIEPNYQIELEKRISWQLDQASLKELMVPSFSHTSGTVLDVELVLRLVKM 852
            LRLLR   MV +EP Y+ ELEKRISWQLDQASLKE+M+PSFSHT GT+LDVEL++RLV+ 
Sbjct: 121  LRLLRIANMVSVEPAYRAELEKRISWQLDQASLKEIMIPSFSHTCGTLLDVELIIRLVRS 180

Query: 851  FSNMDEVIKSGAALVKVAKLVDSYLAEAAIDLNLALPEFFALAGALPSNARATDDGLYRA 672
            F N+DEV KSG+AL+KVAKLVDSYLAEAA+D NL L EF ALAGALPS+ARATDDGLYRA
Sbjct: 181  FVNLDEVAKSGSALIKVAKLVDSYLAEAAVDANLNLSEFIALAGALPSHARATDDGLYRA 240

Query: 671  VDTYLKVHPGTSKQERQNLCRLIDIRKLSSEASLHAAQNDRLPVRAVIQVLFSEQARINR 492
            VDTYLK HPG  KQER+ L RLID RKLS EASLHAAQN+RLPVRAVIQVL+SEQ ++NR
Sbjct: 241  VDTYLKAHPGLPKQERKALFRLIDSRKLSQEASLHAAQNERLPVRAVIQVLYSEQTKLNR 300

Query: 491  QFEWSGSFSGTRSPNPMLEPSGRCFSKREGNAQHMELKKLREDVHRLQAQCNFMQAQIEK 312
            Q +WSGSFSG RSP+   E   R  SKRE + Q ME++KLREDV RL++QC  MQ Q+E+
Sbjct: 301  QIDWSGSFSGARSPSLGFEAPARLLSKRETSDQQMEIRKLREDVLRLESQCYVMQMQMER 360

Query: 311  LVVKKKGFFRWMKLGV-----PSFRPISIMERID-YSGGVASVGFEHQKPVNTNGKLVPG 150
            ++ KKKGFFRW KLG+      S   +SI+E+I+  + G   VG   Q PV+   KLV G
Sbjct: 361  MLEKKKGFFRWKKLGIMPNSLRSSNNVSIVEKIEGKNAGEGDVGSGIQTPVDLKTKLVRG 420

Query: 149  RNQKNWRKSVS 117
            + + + R+  S
Sbjct: 421  KGKTSPRRRKS 431


>ref|XP_002281013.1| PREDICTED: root phototropism protein 3 [Vitis vinifera]
            gi|297743368|emb|CBI36235.3| unnamed protein product
            [Vitis vinifera]
          Length = 433

 Score =  538 bits (1387), Expect = e-150
 Identities = 283/435 (65%), Positives = 329/435 (75%), Gaps = 12/435 (2%)
 Frame = -1

Query: 1385 MKKLNSPEAIAIASMSVGQLAFECWFDDTSVLDMDYFIKTLSGIKEKGVRPDLIGSIITN 1206
            MKKL  PE+I +A       A ECW DD  +LDMDYF+KTLSGIK KGVRPDLIGSII +
Sbjct: 1    MKKLALPESITLAGKRP-IFAAECWLDDACILDMDYFVKTLSGIKAKGVRPDLIGSIIAH 59

Query: 1205 YASKWLPELSDEDTKQTPAICEESPGSVTAKWMKKRFFVETLVGVLPPEKDSVPCNFLLR 1026
            YASKWLPEL  +D K    I EESP S T  WMKKRFFVETLVG+LPPEKDS+PCNFLLR
Sbjct: 60   YASKWLPELLTDDEKGL-TIFEESPESATTSWMKKRFFVETLVGILPPEKDSIPCNFLLR 118

Query: 1025 LLRTGAMVGIEPNYQIELEKRISWQLDQASLKELMVPSFSHTSGTVLDVELVLRLVKMFS 846
            LLRT  MVG+EP Y+ ELE RISWQLDQASLKELM+PSF HT  T+LDVELV+RLVK F 
Sbjct: 119  LLRTANMVGVEPTYRAELESRISWQLDQASLKELMIPSFCHTCATLLDVELVMRLVKRFV 178

Query: 845  NMDEVIKSGAALVKVAKLVDSYLAEAAIDLNLALPEFFALAGALPSNARATDDGLYRAVD 666
            NMD   KSGAAL+KVAKL+DSYLAEAA+D NL L EF +LAGALPS+AR+TDDGLYRA+D
Sbjct: 179  NMDAAAKSGAALIKVAKLIDSYLAEAAVDSNLTLQEFASLAGALPSHARSTDDGLYRAID 238

Query: 665  TYLKVHPGTSKQERQNLCRLIDIRKLSSEASLHAAQNDRLPVRAVIQVLFSEQARINRQF 486
            TYLK HPG SKQ+R+ LCR+ID RKLS EAS HAA N+RLPVRAVIQVL SEQ ++ RQ 
Sbjct: 239  TYLKAHPGVSKQDRKVLCRIIDSRKLSPEASFHAAHNERLPVRAVIQVLLSEQTKLTRQL 298

Query: 485  EWSGSFSGTRSPNP-MLEPSGRCFSKREGNAQHMELKKLREDVHRLQAQCNFMQAQIEKL 309
            +WSGSFSGTRSP P +LE   RC SKRE ++Q  E+++LRE+V RLQ QC+ MQ QIE+L
Sbjct: 299  DWSGSFSGTRSPKPGVLEHPSRCPSKREISSQQTEIRRLREEVRRLQGQCSAMQGQIERL 358

Query: 308  VVKKKGFFRWMKLGVPSFRPI-----SIMERI---DYSGGVASVGFEHQKPVN---TNGK 162
            + KKKG F+W KL +PSFR       SI E+I   +   G     F  Q P++   T  +
Sbjct: 359  LEKKKGLFKWKKLVMPSFRSTGVDAGSIGEKIQEREEGEGEGEAAFGQQTPLDFKITKTR 418

Query: 161  LVPGRNQKNWRKSVS 117
            LV G+    WR S+S
Sbjct: 419  LVRGKTPPKWRNSLS 433


>ref|XP_002303269.1| predicted protein [Populus trichocarpa] gi|222840701|gb|EEE78248.1|
            predicted protein [Populus trichocarpa]
          Length = 409

 Score =  535 bits (1378), Expect = e-149
 Identities = 282/409 (68%), Positives = 322/409 (78%), Gaps = 10/409 (2%)
 Frame = -1

Query: 1313 WFDDTSVLDMDYFIKTLSGIKEKGVRPDLIGSIITNYASKWLPELSD---EDTKQTPAIC 1143
            WFDD  +LDMDYF+KTL+GIK KGVRPDLIGSII +YASKWLP+LSD     T +  A  
Sbjct: 1    WFDDACILDMDYFVKTLAGIKAKGVRPDLIGSIIAHYASKWLPDLSDGHHPSTDKGIANF 60

Query: 1142 EESPGSVTAKWMKKRFFVETLVGVLPPEKDSVPCNFLLRLLRTGAMVGIEPNYQIELEKR 963
             ESP SVT  WMKKRFFVETLVG+LPPEKDS+PCNFLLRLLR   MVG+EP Y+ ELEK 
Sbjct: 61   AESPESVTTSWMKKRFFVETLVGILPPEKDSIPCNFLLRLLRIANMVGVEPTYRAELEKM 120

Query: 962  ISWQLDQASLKELMVPSFSHTSGTVLDVELVLRLVKMFSNMDEVIKSGAALVKVAKLVDS 783
            ISWQLDQASLKELM+PSFSHT GT+LDVEL++RLV  F N+DEV KS AAL+KVAKLVDS
Sbjct: 121  ISWQLDQASLKELMIPSFSHTCGTLLDVELIIRLVGRFVNLDEVAKSDAALIKVAKLVDS 180

Query: 782  YLAEAAIDLNLALPEFFALAGALPSNARATDDGLYRAVDTYLKVHPGTSKQERQNLCRLI 603
            YLAEAA+D NL L EF ALAGALPS++RATDDGLYRA+DTYLK HPG SK ER+ L RLI
Sbjct: 181  YLAEAAVDSNLNLAEFVALAGALPSHSRATDDGLYRAIDTYLKAHPGVSKHERKVLFRLI 240

Query: 602  DIRKLSSEASLHAAQNDRLPVRAVIQVLFSEQARINRQFEWSGSFSGTRSPNPMLEPSGR 423
            D RKLS EASLHAAQN+RLPVRAVIQVLFSE  ++NRQ +WSGSFSGTRSP   LE   R
Sbjct: 241  DSRKLSQEASLHAAQNERLPVRAVIQVLFSEHTKLNRQMDWSGSFSGTRSPYIGLEAPAR 300

Query: 422  CFSKREGNAQHMELKKLREDVHRLQAQCNFMQAQIEKLVVKKKGFFRWMKLG--VPSFRP 249
            C SKRE + Q  E++KLREDVHRLQ+QC  MQAQ+E+   KKKGFFRW KLG  +PS + 
Sbjct: 301  CLSKREMSVQQTEVRKLREDVHRLQSQCYAMQAQMERSWEKKKGFFRWKKLGNVMPSMKS 360

Query: 248  --ISIMERIDYSG-GVASVGFEHQKPVNTNGKLVPGRNQK--NWRKSVS 117
               S++E+I+ S  G   VG   Q PV+   KLV G+N+    WRKS S
Sbjct: 361  NNFSVVEKIEESNEGEGEVGCGIQTPVDLKTKLVRGKNKAPLMWRKSTS 409


>ref|XP_003531695.1| PREDICTED: root phototropism protein 3-like [Glycine max]
          Length = 445

 Score =  526 bits (1354), Expect = e-147
 Identities = 275/428 (64%), Positives = 330/428 (77%), Gaps = 3/428 (0%)
 Frame = -1

Query: 1391 TEMKKLNSPEAIAIASMSVGQLAFECWFDDTSVLDMDYFIKTLSGIKEKGVRPDLIGSII 1212
            TEMKK + PE++   + S  Q + ECWFDD  +LDMDYF+KTLSGIK KGVR DLIGSII
Sbjct: 23   TEMKKQSYPESLTFQAKSPSQFSSECWFDDACILDMDYFVKTLSGIKAKGVRADLIGSII 82

Query: 1211 TNYASKWLPELSDEDTKQTPAI-CEESPGSVTAKWMKKRFFVETLVGVLPPEKDSVPCNF 1035
            T+YASKWLP+LS  D  +      EESP SVTA WMKKRFFVETLVGVLPPEKD++PCNF
Sbjct: 83   THYASKWLPDLSAGDMAERGLTQFEESPESVTASWMKKRFFVETLVGVLPPEKDAIPCNF 142

Query: 1034 LLRLLRTGAMVGIEPNYQIELEKRISWQLDQASLKELMVPSFSHTSGTVLDVELVLRLVK 855
            LLRLLRT  MVG+E  Y+ ELEKRISWQLDQASLKEL++PSFSHT GT+LDVELV+RLVK
Sbjct: 143  LLRLLRTANMVGVEGTYRQELEKRISWQLDQASLKELVIPSFSHTCGTLLDVELVIRLVK 202

Query: 854  MFSNMD-EVIKSGAALVKVAKLVDSYLAEAAIDLNLALPEFFALAGALPSNARATDDGLY 678
             F ++D E  KSGA+LVKVAKLVDSYLAEAA+D NL+L +FF LA ALPS+ARATDDGLY
Sbjct: 203  RFVSLDSEGAKSGASLVKVAKLVDSYLAEAAVDANLSLNDFFTLAAALPSHARATDDGLY 262

Query: 677  RAVDTYLKVHPGTSKQERQNLCRLIDIRKLSSEASLHAAQNDRLPVRAVIQVLFSEQARI 498
            RA+DTYLK H G SKQER+ LCRLID RKL+ EASLHAAQN+R PVRAVIQVL SEQ+++
Sbjct: 263  RAIDTYLKAHSGVSKQERKGLCRLIDSRKLTPEASLHAAQNERFPVRAVIQVLLSEQSKL 322

Query: 497  NRQFEWSGSF-SGTRSPNPMLEPSGRCFSKREGNAQHMELKKLREDVHRLQAQCNFMQAQ 321
            NR  +WSGS  SGTRSP  +  P+ RC SKRE NAQ +E+K+L+EDV+RLQ+QC+ M AQ
Sbjct: 323  NRHVDWSGSLVSGTRSPGGLDLPT-RCLSKREANAQQLEIKRLKEDVYRLQSQCSAMHAQ 381

Query: 320  IEKLVVKKKGFFRWMKLGVPSFRPISIMERIDYSGGVASVGFEHQKPVNTNGKLVPGRNQ 141
            +E++V KKKGFF+W K          + + ++ +G       +  + VN  G     +N 
Sbjct: 382  MERMVEKKKGFFKWKKFAFGKSEHDKMEQELEGNGMYTPADLK-TRLVNAKGS---SKNT 437

Query: 140  KNWRKSVS 117
              WRKS+S
Sbjct: 438  HKWRKSMS 445


Top