BLASTX nr result

ID: Cimicifuga21_contig00016668 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00016668
         (234 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002514945.1| ATP binding protein, putative [Ricinus commu...   106   2e-21
ref|XP_002310265.1| predicted protein [Populus trichocarpa] gi|2...   106   2e-21
ref|XP_002310264.1| predicted protein [Populus trichocarpa] gi|2...   106   2e-21
ref|XP_002265580.2| PREDICTED: ATP-dependent zinc metalloproteas...   104   7e-21
emb|CBI27574.3| unnamed protein product [Vitis vinifera]              104   7e-21

>ref|XP_002514945.1| ATP binding protein, putative [Ricinus communis]
           gi|223545996|gb|EEF47499.1| ATP binding protein,
           putative [Ricinus communis]
          Length = 503

 Score =  106 bits (264), Expect = 2e-21
 Identities = 51/78 (65%), Positives = 63/78 (80%), Gaps = 1/78 (1%)
 Frame = -3

Query: 232 NYLKFDVYDLELASISSNARLRTVLLETTNRSILVIEDIDCSVNKPREKDDDDNP-DGKI 56
           NYLKF++YDLEL SISSN+ LR +L  T NRSILVIEDIDCS+     ++ ++NP D ++
Sbjct: 277 NYLKFNIYDLELTSISSNSELRRLLTSTGNRSILVIEDIDCSIKLQDRQNGENNPGDSQL 336

Query: 55  TLSGLLNVVDGLWSSCGD 2
           TLSGLLN +DGLWSSCGD
Sbjct: 337 TLSGLLNFIDGLWSSCGD 354


>ref|XP_002310265.1| predicted protein [Populus trichocarpa] gi|222853168|gb|EEE90715.1|
           predicted protein [Populus trichocarpa]
          Length = 450

 Score =  106 bits (264), Expect = 2e-21
 Identities = 54/80 (67%), Positives = 61/80 (76%), Gaps = 3/80 (3%)
 Frame = -3

Query: 232 NYLKFDVYDLELASISSNARLRTVLLETTNRSILVIEDIDCSVNKPREKDDDDNPDGK-- 59
           NYLKFD+YDLEL S+SSN+ LR VLL TT+RSILVIEDIDCSV     +   D  DG   
Sbjct: 252 NYLKFDIYDLELTSLSSNSDLRRVLLSTTSRSILVIEDIDCSVQTRDRQQGGDQYDGSNS 311

Query: 58  -ITLSGLLNVVDGLWSSCGD 2
            +TLSGLLN +DGLWSSCGD
Sbjct: 312 TLTLSGLLNFIDGLWSSCGD 331


>ref|XP_002310264.1| predicted protein [Populus trichocarpa] gi|222853167|gb|EEE90714.1|
           predicted protein [Populus trichocarpa]
          Length = 453

 Score =  106 bits (264), Expect = 2e-21
 Identities = 53/80 (66%), Positives = 62/80 (77%), Gaps = 3/80 (3%)
 Frame = -3

Query: 232 NYLKFDVYDLELASISSNARLRTVLLETTNRSILVIEDIDCSVNKPREKDDDDNPDG--- 62
           NYLKFD+YDLEL SI SN+ LR VLL TTNRSILVIEDIDC++     +  +D  DG   
Sbjct: 267 NYLKFDIYDLELTSIYSNSDLRRVLLSTTNRSILVIEDIDCNMEMRDRQQGEDQYDGSNS 326

Query: 61  KITLSGLLNVVDGLWSSCGD 2
           ++TLSGLLN +DGLWSSCGD
Sbjct: 327 RLTLSGLLNFIDGLWSSCGD 346


>ref|XP_002265580.2| PREDICTED: ATP-dependent zinc metalloprotease FTSH, chloroplastic
           [Vitis vinifera]
          Length = 516

 Score =  104 bits (260), Expect = 7e-21
 Identities = 50/78 (64%), Positives = 63/78 (80%), Gaps = 1/78 (1%)
 Frame = -3

Query: 232 NYLKFDVYDLELASISSNARLRTVLLETTNRSILVIEDIDCSVN-KPREKDDDDNPDGKI 56
           NYLKF++YDLEL S+ +N+ LR +L+ T NRSILVIEDIDCSV  + R+   D+N D ++
Sbjct: 278 NYLKFNIYDLELTSLWNNSDLRRLLVSTANRSILVIEDIDCSVELQNRQNGSDNNTDSQL 337

Query: 55  TLSGLLNVVDGLWSSCGD 2
           TLSGLLN +DGLWSSCGD
Sbjct: 338 TLSGLLNFIDGLWSSCGD 355


>emb|CBI27574.3| unnamed protein product [Vitis vinifera]
          Length = 623

 Score =  104 bits (260), Expect = 7e-21
 Identities = 50/78 (64%), Positives = 63/78 (80%), Gaps = 1/78 (1%)
 Frame = -3

Query: 232 NYLKFDVYDLELASISSNARLRTVLLETTNRSILVIEDIDCSVN-KPREKDDDDNPDGKI 56
           NYLKF++YDLEL S+ +N+ LR +L+ T NRSILVIEDIDCSV  + R+   D+N D ++
Sbjct: 247 NYLKFNIYDLELTSLWNNSDLRRLLVSTANRSILVIEDIDCSVELQNRQNGSDNNTDSQL 306

Query: 55  TLSGLLNVVDGLWSSCGD 2
           TLSGLLN +DGLWSSCGD
Sbjct: 307 TLSGLLNFIDGLWSSCGD 324



 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 30/57 (52%), Positives = 39/57 (68%), Gaps = 1/57 (1%)
 Frame = -3

Query: 169 RTVLLETTNRSILVIEDIDCSVNKPREKDDDDN-PDGKITLSGLLNVVDGLWSSCGD 2
           R +L+   N+SILVIEDIDCS     ++ +  N  D ++ LS LLN +DGLWSSCGD
Sbjct: 536 RRLLVSIRNQSILVIEDIDCSSELQGQQAEGHNLNDSQLMLSELLNSIDGLWSSCGD 592


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