BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00016665
         (3002 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI30403.3| unnamed protein product [Vitis vinifera]              835   0.0  
ref|XP_004147918.1| PREDICTED: RNA polymerase II C-terminal doma...   808   0.0  
ref|XP_004167060.1| PREDICTED: RNA polymerase II C-terminal doma...   803   0.0  
ref|XP_003529147.1| PREDICTED: RNA polymerase II C-terminal doma...   748   0.0  
ref|XP_002528114.1| double-stranded RNA binding protein, putativ...   742   0.0  

>emb|CBI30403.3| unnamed protein product [Vitis vinifera]
          Length = 853

 Score =  835 bits (2157), Expect = 0.0
 Identities = 480/860 (55%), Positives = 573/860 (66%), Gaps = 57/860 (6%)
 Frame = +3

Query: 129  MNRLGFKSMVFHGDFCLGEVEIFSTGKDQNFRFPNNEIRINYISPPGERCHPLSILQTIS 308
            M+RLGFKS+V+HGD  LGE++     KDQ+F+FPNNEIR+++ISP  ERC PLSIL TIS
Sbjct: 1    MSRLGFKSLVYHGDLFLGELDAIPV-KDQSFQFPNNEIRVHHISPISERCPPLSILHTIS 59

Query: 309  PFTVRCKLKSVSTVEKCHLGTLYISCLHEQKTAIVLLGGEELHLVAMPSKQEKLLPCFWC 488
             F+VRCKL+S S +++ +L  L+ SC HE KTA+VL+G EELHLVAMPSKQ+K  PCFWC
Sbjct: 60   SFSVRCKLESSSPIQQPNLINLHASCFHELKTAVVLIGDEELHLVAMPSKQKKF-PCFWC 118

Query: 489  CSVPIGRYGSCLSMLNLRCLAIVFDLDETLIVANTMKSFEDKIDSLQKRLECEDDPLRVQ 668
             SVP G Y S L MLNLRCLAIVFDLDETLIVANTMKSFED+ID+L+  +  E D +R+ 
Sbjct: 119  YSVPCGLYSSSLWMLNLRCLAIVFDLDETLIVANTMKSFEDRIDALRGWIARESDQVRIS 178

Query: 669  GMSAELRRYVEDRSLLKQYTESDNVMDNGKLFTVQFEGVQSLLNNQEKVIRPVIRLKERN 848
            GMSAEL+RY++DR+LLKQYTE+D VMDNGK+  VQ E V  L ++ E+V+RPVIR  ERN
Sbjct: 179  GMSAELKRYIDDRALLKQYTENDLVMDNGKILKVQSEEVAPLSDSHERVVRPVIRFPERN 238

Query: 849  IVLTRINPEIRDTSVLVRLRPAWEELRSYLNAKGRKRFEVYVCTMAERDYALEMWRLLDP 1028
            IVLTRINPEIRDTSVLVRLRPAWE+LRSYL AKGRKRFEVYVCTMAERDYALEMWRLLDP
Sbjct: 239  IVLTRINPEIRDTSVLVRLRPAWEDLRSYLIAKGRKRFEVYVCTMAERDYALEMWRLLDP 298

Query: 1029 EAHLISSNQLLNRVVCVKSGSRKSLSSVFQDGTCHPKMAMVIDDRLKVWEDNDQPRVHVV 1208
            EAHLI S QLL+RVVCVKSGSRKSL +VFQ+G+CHPKMAMVIDDRLKVWED DQPRVHVV
Sbjct: 299  EAHLIGSKQLLDRVVCVKSGSRKSLLNVFQNGSCHPKMAMVIDDRLKVWEDKDQPRVHVV 358

Query: 1209 PAFTPYYAPQAETASAVPILFVARNVACNVRTGFFKEFDENILRRIFDLCYEDEVANIPY 1388
            P FTPYYAPQAET + VPIL VARNVACNVR GFFKEFDENILR+I +L YEDEV N+P 
Sbjct: 359  PPFTPYYAPQAETTNPVPILCVARNVACNVRAGFFKEFDENILRQISELFYEDEVVNLPS 418

Query: 1389 SPDVSDFLMSED---------------------------ETHTGDLAPPFITKIPDLRLE 1487
            +PDVS++LMSED                           + H  D A   I    + R E
Sbjct: 419  APDVSNYLMSEDAGFVPNGNANVPIAEGMHGAEVERRLNQPHIVDSAASPIANSYEFRSE 478

Query: 1488 ASQQPLPMSPNVTSSEILRTNLPLHQSGLPEAPFNLEVNPSELD-PFKRKKPTLQHG--- 1655
              Q P     NV      R  +P  +  L  AP   + +  E D   KR+   ++HG   
Sbjct: 479  TLQPPALTVQNVVGPTSSRLLMPSQKPSLLGAPIKRDFSSFESDADMKRRLLIMKHGQDV 538

Query: 1656 --QNSSDPSLLSRLPTNTSLPPIQSCGGWLVEEDLNMDHTNKRAAGSAQ----------- 1796
              Q+  DP +LSRLP   S   +   G WLVE+D N  H N RA+G  Q           
Sbjct: 539  RNQSLGDPPILSRLP-QISTSSLHPQGVWLVEDDSNRGHLNNRASGLVQEADVLKPDKQR 597

Query: 1797 AHQ-----NLPSSKLESIRTGXXXXXXXXXXXXXXXRQEEKKQNHSQSNHSLLSEGEMSI 1961
             HQ     N P S   S+                   + +KK     S  S +   +   
Sbjct: 598  GHQIPFGHNTPGSTPVSL---LPHLPQLKNDEVSAANERQKKNLPPASQPSEVGVSQNQA 654

Query: 1962 SQANKEPGTEAGKA--PPPY--IEVLLEIGQKCGSKIEFRSVVSTSKELQFSVEVLFTGD 2129
            S   +E  TEAGK    PP+  I VL EIG++C SK+EFRSVVSTSK+LQFSVEVLFTG+
Sbjct: 655  STTGREQ-TEAGKVNMMPPHLSIGVLQEIGRRCSSKVEFRSVVSTSKDLQFSVEVLFTGE 713

Query: 2130 KIGAGMGKTKRDAQYQAAEDALRTLAAEYRAYVGLNSGSVDRDSEMPFPRNENGFLWDDP 2309
            KIG GMGKT++DAQ QAAE+AL +LA +Y AY   +SG+VD+D +     NENGFLWD  
Sbjct: 714  KIGVGMGKTRKDAQQQAAENALHSLADKYVAYTTPHSGAVDKDFDKLSLSNENGFLWDTT 773

Query: 2310 E--SDELPLKQALPDAHTSEAGGGAI-PGLKSFGTQDARKRGNSPRQDETVQNKRLKGEF 2480
               S EL ++   P    SEAG  A      S   Q  +KR NSPR  +++ +KR K E 
Sbjct: 774  SAGSSELLMEDGFPKESISEAGEMAHGTTSSSVVNQQVQKRANSPRLPQSIPSKRSKEEL 833

Query: 2481 APRSQ-IASSQQHKNGSTVS 2537
               SQ ++SS   KNG T+S
Sbjct: 834  MRGSQSLSSSWPQKNGHTIS 853


>ref|XP_004147918.1| PREDICTED: RNA polymerase II C-terminal domain phosphatase-like
            2-like [Cucumis sativus]
          Length = 829

 Score =  808 bits (2087), Expect = 0.0
 Identities = 457/851 (53%), Positives = 562/851 (66%), Gaps = 48/851 (5%)
 Frame = +3

Query: 129  MNRLGFKSMVFHGDFCLGEVEIFSTGKDQNFRFPNNEIRINYISPPGERCHPLSILQTIS 308
            M+RLGFKS+VFHGD  LGE++      DQNF+FPNNEIRI+ ISPP ERC PLS+LQTIS
Sbjct: 1    MSRLGFKSVVFHGDVRLGELDAIPA-TDQNFQFPNNEIRIHRISPPSERCPPLSVLQTIS 59

Query: 309  PFTVRCKLKSVSTVEKCHLGTLYISCLHEQKTAIVLLGGEELHLVAMPSKQEKLLPCFWC 488
             F++RCKL+S   VE+ HL  L+ SC HE KTAIVL+G EE+HLVAMPSKQ K  PCFWC
Sbjct: 60   SFSLRCKLQSSLPVEQPHLIQLHYSCFHELKTAIVLVGDEEIHLVAMPSKQ-KNFPCFWC 118

Query: 489  CSVPIGRYGSCLSMLNLRCLAIVFDLDETLIVANTMKSFEDKIDSLQKRLECEDDPLRVQ 668
             +VP G Y SCL MLNLRCLAIVFDLDETLIVANTMKSFED+I++L+  +  E DPLR+ 
Sbjct: 119  FAVPCGLYLSCLGMLNLRCLAIVFDLDETLIVANTMKSFEDRIEALRIWIAREADPLRIS 178

Query: 669  GMSAELRRYVEDRSLLKQYTESDNVMDNGKLFTVQFEGVQSLLNNQEKVIRPVIRLKERN 848
            GMSAEL+RYVEDR LLKQY E D V DNG++F  Q E V  L  N EKV+RP+IRL ++N
Sbjct: 179  GMSAELKRYVEDRLLLKQYIEHDTVNDNGRIFKAQLEEVPPLNGNCEKVVRPIIRLLDKN 238

Query: 849  IVLTRINPEIRDTSVLVRLRPAWEELRSYLNAKGRKRFEVYVCTMAERDYALEMWRLLDP 1028
            +VLTRINPEIRDTSVLVRLRPAWE+LRSYL A+GRKRFEVYVCTMAERDYALEMWRLLDP
Sbjct: 239  LVLTRINPEIRDTSVLVRLRPAWEDLRSYLTARGRKRFEVYVCTMAERDYALEMWRLLDP 298

Query: 1029 EAHLISSNQLLNRVVCVKSGSRKSLSSVFQDGTCHPKMAMVIDDRLKVWEDNDQPRVHVV 1208
            EAHLI++ QLL RVVCVKSGS+KSL +VFQ G+CHPKMAMVIDDR KVWED DQPRVHVV
Sbjct: 299  EAHLIATKQLLERVVCVKSGSKKSLLNVFQSGSCHPKMAMVIDDRSKVWEDKDQPRVHVV 358

Query: 1209 PAFTPYYAPQAETASAVPILFVARNVACNVRTGFFKEFDENILRRIFDLCYEDEVANIPY 1388
            PAFTPYYAPQAETA+AVP+L VARNVACNVR  +FKE+DE++LRRI ++ YED+V ++P 
Sbjct: 359  PAFTPYYAPQAETANAVPVLCVARNVACNVRGCYFKEYDESLLRRILEISYEDDVVDLPP 418

Query: 1389 SPDVSDFLMSE------------------------------DETHTGDLAPPFITKIPDL 1478
            +PDVS ++MSE                              D+ H  D+A    T   D 
Sbjct: 419  APDVSSYMMSEEAGFVPNETVNAPICEGMNGAEVERRLNQPDDKHVIDMANNPTTSQTDA 478

Query: 1479 RLEASQQPLPMSPNVTSSEILRTNLPLHQSGLPEAPFNLEVNPSELDPFKR----KKPTL 1646
            R + SQ P P++PN+T  +  RT LP  + GL  AP   +++       KR     KP++
Sbjct: 479  RADTSQLPTPLNPNITGPKSSRTLLPSQKPGLLGAPVRRDISSDH--DMKRGLLAMKPSI 536

Query: 1647 Q-HGQNSSDPSLLSRLPTNTSLPPIQSCGGWLVEEDLNMDHTNKRAAGSAQAHQNLPSSK 1823
                Q   DP +LSR+    S   +Q  G  LV+ED +  H N+R +G         S K
Sbjct: 537  DLRTQTFGDPPILSRMSPQISASGLQVLGASLVDEDSSQGHQNRRPSGLIPESDASKSDK 596

Query: 1824 LESIRTGXXXXXXXXXXXXXXXRQEEKKQNHSQSNHSLLSEGEMSISQANKEPGTEAG-- 1997
              S                     +    N+SQ+   + +  +   S  NKE  TEAG  
Sbjct: 597  HRS--------------------HQNLFSNNSQALTGVAAISQNHASNNNKEHQTEAGIV 636

Query: 1998 KAPPP--YIEVLLEIGQKCGSKIEFRSVVSTSKELQFSVEVLFTGDKIGAGMGKTKRDAQ 2171
              PPP  YI VL EIG++C SK+EF++VVSTSK+LQFSVEVLFTG+KIG G+GKT++DAQ
Sbjct: 637  SIPPPSLYIGVLQEIGRRCSSKVEFKTVVSTSKDLQFSVEVLFTGEKIGVGLGKTRKDAQ 696

Query: 2172 YQAAEDALRTLAAEYRAYVGLNSGSVDRDSEMPFPRNENGFLWDD--PESDELPLKQALP 2345
             QAAE+AL  LA +Y A++    G +D D +      ENGFLWD   P  +ELP ++ + 
Sbjct: 697  QQAAENALHNLADKYAAHIKPLMGPMDADLDKLSIGVENGFLWDTAAPAVNELPKEEDVW 756

Query: 2346 DAHTSEAGGGAIPGLKSFGT-----QDARKRGNSPRQDETVQNK--RLKGEFAPRSQIAS 2504
                S  G        S  T     Q  +KR +SPR   + ++K  +  G      Q+  
Sbjct: 757  HKENSSEGCDEPESTNSDSTNHQQPQHVQKRQSSPRPFPSKRSKEDQPHGPQHHHHQLPP 816

Query: 2505 SQQHKNGSTVS 2537
            S+Q KNG + S
Sbjct: 817  SRQQKNGHSNS 827


>ref|XP_004167060.1| PREDICTED: RNA polymerase II C-terminal domain phosphatase-like
            2-like [Cucumis sativus]
          Length = 837

 Score =  803 bits (2074), Expect = 0.0
 Identities = 454/845 (53%), Positives = 558/845 (66%), Gaps = 48/845 (5%)
 Frame = +3

Query: 129  MNRLGFKSMVFHGDFCLGEVEIFSTGKDQNFRFPNNEIRINYISPPGERCHPLSILQTIS 308
            M+RLGFKS+VFHGD  LGE++      DQNF+FPNNEIRI+ ISPP ERC PLS+LQTIS
Sbjct: 1    MSRLGFKSVVFHGDVRLGELDAIPA-TDQNFQFPNNEIRIHRISPPSERCPPLSVLQTIS 59

Query: 309  PFTVRCKLKSVSTVEKCHLGTLYISCLHEQKTAIVLLGGEELHLVAMPSKQEKLLPCFWC 488
             F++RCKL+S   VE+ HL  L+ SC HE KTAIVL+G EE+HLVAMPSKQ K  PCFWC
Sbjct: 60   SFSLRCKLQSSLPVEQPHLIQLHYSCFHELKTAIVLVGDEEIHLVAMPSKQ-KNFPCFWC 118

Query: 489  CSVPIGRYGSCLSMLNLRCLAIVFDLDETLIVANTMKSFEDKIDSLQKRLECEDDPLRVQ 668
             +VP G Y SCL MLNLRCLAIVFDLDETLIVANTMKSFED+I++L+  +  E DPLR+ 
Sbjct: 119  FAVPCGLYLSCLGMLNLRCLAIVFDLDETLIVANTMKSFEDRIEALRIWIAREADPLRIS 178

Query: 669  GMSAELRRYVEDRSLLKQYTESDNVMDNGKLFTVQFEGVQSLLNNQEKVIRPVIRLKERN 848
            GMSAEL+RYVEDR LLKQY E D V DNG++F  Q E V  L  N EKV+RP+IRL ++N
Sbjct: 179  GMSAELKRYVEDRLLLKQYIEHDTVNDNGRIFKAQLEEVPPLNGNCEKVVRPIIRLLDKN 238

Query: 849  IVLTRINPEIRDTSVLVRLRPAWEELRSYLNAKGRKRFEVYVCTMAERDYALEMWRLLDP 1028
            +VLTRINPEIRDTSVLVRLRPAWE+LRSYL A+GRKRFEVYVCTMAERDYALEMWRLLDP
Sbjct: 239  LVLTRINPEIRDTSVLVRLRPAWEDLRSYLTARGRKRFEVYVCTMAERDYALEMWRLLDP 298

Query: 1029 EAHLISSNQLLNRVVCVKSGSRKSLSSVFQDGTCHPKMAMVIDDRLKVWEDNDQPRVHVV 1208
            EAHLI++ QLL RVVCVKSGS+KSL +VFQ G+CHPKMAMVIDDR KVWED DQPRVHVV
Sbjct: 299  EAHLIATKQLLERVVCVKSGSKKSLLNVFQSGSCHPKMAMVIDDRSKVWEDKDQPRVHVV 358

Query: 1209 PAFTPYYAPQAETASAVPILFVARNVACNVRTGFFKEFDENILRRIFDLCYEDEVANIPY 1388
            PAFTPYYAPQAETA+AVP+L VARNVACNVR  +FKE+DE++LRRI ++ YED+V ++P 
Sbjct: 359  PAFTPYYAPQAETANAVPVLCVARNVACNVRGCYFKEYDESLLRRILEISYEDDVVDLPP 418

Query: 1389 SPDVSDFLMSE------------------------------DETHTGDLAPPFITKIPDL 1478
            +PDVS ++MSE                              D+ H  D+A    T   D 
Sbjct: 419  APDVSSYMMSEEAGFVPNETVNAPICEGMNGAEVERRLNQPDDKHVIDMANNPTTSQTDA 478

Query: 1479 RLEASQQPLPMSPNVTSSEILRTNLPLHQSGLPEAPFNLEVNPSELDPFKR----KKPTL 1646
            R + SQ P P++PN+T  +  RT LP  + GL  AP   +++       KR     KP++
Sbjct: 479  RADTSQLPTPLNPNITGPKSSRTLLPSQKPGLLGAPVRRDISSDH--DMKRGLLAMKPSI 536

Query: 1647 Q-HGQNSSDPSLLSRLPTNTSLPPIQSCGGWLVEEDLNMDHTNKRAAGSAQAHQNLPSSK 1823
                Q   DP +LSR+    S   +Q  G  LV+ED +  H N+R +G         S K
Sbjct: 537  DLRTQTFGDPPILSRMSPQISASGLQVLGASLVDEDSSQGHQNRRPSGLIPESDASKSDK 596

Query: 1824 LESIRTGXXXXXXXXXXXXXXXRQEEKKQNHSQSNHSLLSEGEMSISQANKEPGTEAG-- 1997
              S                     +    N+SQ+   + +  +   S  NKE  TEAG  
Sbjct: 597  HRS--------------------HQNLFSNNSQALTGVAAISQNHASNNNKEHQTEAGIV 636

Query: 1998 KAPPP--YIEVLLEIGQKCGSKIEFRSVVSTSKELQFSVEVLFTGDKIGAGMGKTKRDAQ 2171
              PPP  YI VL EIG++C SK+EF++VVSTSK+LQFSVEVLFTG+KIG G+GKT++DAQ
Sbjct: 637  SIPPPSLYIGVLQEIGRRCSSKVEFKTVVSTSKDLQFSVEVLFTGEKIGVGLGKTRKDAQ 696

Query: 2172 YQAAEDALRTLAAEYRAYVGLNSGSVDRDSEMPFPRNENGFLWDD--PESDELPLKQALP 2345
             QAAE+AL  LA +Y A++    G +D D +      ENGFLWD   P  +ELP ++ + 
Sbjct: 697  QQAAENALHNLADKYAAHIKPLMGPMDADLDKLSIGVENGFLWDTAAPAVNELPKEEDVW 756

Query: 2346 DAHTSEAGGGAIPGLKSFGT-----QDARKRGNSPRQDETVQNK--RLKGEFAPRSQIAS 2504
                S  G        S  T     Q  +KR +SPR   + ++K  +  G      Q+  
Sbjct: 757  HKENSSEGCDEPESTNSDSTNHQQPQHVQKRQSSPRPFPSKRSKEDQPHGPQHHHHQLPP 816

Query: 2505 SQQHK 2519
            S+Q K
Sbjct: 817  SRQQK 821


>ref|XP_003529147.1| PREDICTED: RNA polymerase II C-terminal domain phosphatase-like
            2-like [Glycine max]
          Length = 830

 Score =  748 bits (1931), Expect = 0.0
 Identities = 425/841 (50%), Positives = 543/841 (64%), Gaps = 61/841 (7%)
 Frame = +3

Query: 129  MNRLGFKSMVFHGDFCLGEVEIF-------STGKDQNFRFPNNEIRINYISPPGERCHPL 287
            M+RLGFK  V+ GD  +GE+++        +T    NFRFPNNEIRI++ S   ERC PL
Sbjct: 1    MSRLGFKHEVYDGDKHIGELDVIPPSSLTTTTSFHNNFRFPNNEIRIHHFSAKSERCPPL 60

Query: 288  SILQTISPFTVRCKLKSVSTVEKCHLGTLYISCLHEQKTAIVLLGGEELHLVAMPSKQEK 467
            SILQT++ F VRCKL S    E+  L  ++ SC +E KTA+V++  EE+HLV+MPSK++K
Sbjct: 61   SILQTVAAFNVRCKLDSSVATEQKELIAIHASCFYEMKTAVVVVNDEEIHLVSMPSKRKK 120

Query: 468  LLPCFWCCSVPIGRYGSCLSMLNLRCLAIVFDLDETLIVANTMKSFEDKIDSLQKRLECE 647
              PCFWC +VP+G Y +CL MLNLRCLAIVFDLDETLIVANTMKSFED+I++L+  L  E
Sbjct: 121  F-PCFWCFAVPLGLYDACLGMLNLRCLAIVFDLDETLIVANTMKSFEDRIEALRGWLSRE 179

Query: 648  DDPLRVQGMSAELRRYVEDRSLLKQYTESDNVMDNGKLFTVQFEGVQSLLNNQEKVIRPV 827
             DPLRVQGMS+EL+RY+EDR LLKQY ESD V+DNGK++ VQ E    L  + EK++RPV
Sbjct: 180  TDPLRVQGMSSELKRYLEDRLLLKQYAESDTVVDNGKVYKVQMEEAPPLSGSHEKLVRPV 239

Query: 828  IRLKERNIVLTRINPEIRDTSVLVRLRPAWEELRSYLNAKGRKRFEVYVCTMAERDYALE 1007
            +RL+ERNIVLTRINPEIRDTSVLVRLRPAW++LRSYL AKGRKRFEVYVCTMAERDYALE
Sbjct: 240  VRLQERNIVLTRINPEIRDTSVLVRLRPAWDDLRSYLTAKGRKRFEVYVCTMAERDYALE 299

Query: 1008 MWRLLDPEAHLISSNQLLNRVVCVKSGSRKSLSSVFQDGTCHPKMAMVIDDRLKVWEDND 1187
            +WRLLDP AHLI   Q+LNRV+CVKSGSRKSL +VFQDG CHPKMAMVIDDR KVW D D
Sbjct: 300  IWRLLDPGAHLIGLKQVLNRVICVKSGSRKSLLNVFQDGVCHPKMAMVIDDRSKVWVDKD 359

Query: 1188 QPRVHVVPAFTPYYAPQAETASAVPILFVARNVACNVRTGFFKEFDENILRRIFDLCYED 1367
            QPRVHVVPAFTPYYAPQAETA+AVP+L VARNVACNVR  FFKEFDE++L+RI ++ +ED
Sbjct: 360  QPRVHVVPAFTPYYAPQAETANAVPVLCVARNVACNVRGCFFKEFDESLLQRIAEIFFED 419

Query: 1368 EVANIPYSPDVSDFLMSE---------------------------DETHTGDLAPPFITK 1466
            ++  +P+ PDVS++LMSE                           D+  + DL+   +T 
Sbjct: 420  DIGLLPHPPDVSNYLMSEDVPNGNANAPFSEGMNGAEVERRLSQPDDKFSVDLSTRPMTN 479

Query: 1467 IPDLRLEASQQPLPMSPNVTSSEILRTNLPLHQSGLPEAPFNLEVNPSELDPFKRK---- 1634
              + R E SQ    +  NVT     RT +P  + GL   P   + N  + D   RK    
Sbjct: 480  SVEFRHETSQPTAGIISNVTGPGSSRTLIPSQKPGLLGPPVKHDGNSVDRDYDMRKGLLG 539

Query: 1635 ---KPTLQHGQNSSDPSLLSRLPTNTSLPPIQSCGGWLVEEDL-NMDHTNKRAAGSAQAH 1802
                P ++ GQ S++P L+ R P   S   +Q  GG LVE+D+ +   TN   + S +  
Sbjct: 540  MRHGPDIR-GQISAEPPLILRPPNQASPSLMQPFGGGLVEDDIASRSQTNSWPSASVKES 598

Query: 1803 QNLPSSKLESIRTGXXXXXXXXXXXXXXXRQEEKKQNHSQSNHSLLSEGEMSISQANKEP 1982
              + S K ++ +                 +  + K   + S   L  +   S SQ + E 
Sbjct: 599  NVIKSDKHQAQQKPFSNSVIGSSPNVLLPQASQLKAEEATSVSDLQRQIVPSKSQLSSED 658

Query: 1983 GT--------------EAGK---APPPYIEVLLEIGQKCGSKIEFRSVVSTSKELQFSVE 2111
            G               EAGK     P  I+VL EIG++C SK+EF+S++STSK+LQFSVE
Sbjct: 659  GISQNHASSNSKDFQHEAGKMNFLSPLSIQVLQEIGRRCNSKVEFKSILSTSKDLQFSVE 718

Query: 2112 VLFTGDKIGAGMGKTKRDAQYQAAEDALRTLAAEYRAYVGLNSGSVDRDSEMPFPRNENG 2291
            VLFTG+KIG GMG+T++DAQ QAAE+ALR+LA +Y A+V     +VD+D +      +NG
Sbjct: 719  VLFTGEKIGVGMGRTRKDAQQQAAENALRSLAEKYVAHVEPQCRAVDKDFDKLSLGCDNG 778

Query: 2292 FLWD--DPESDELPLKQALPDAHTSEAGGGAIPGLKSFGTQDARKRGNSPRQDETVQNKR 2465
            FLWD  +PES E   +  +   + SEA              DA  R ++P       +KR
Sbjct: 779  FLWDVINPESSEPQPEDGVSRENASEA-------------LDAETRSSTPNAINQQMDKR 825

Query: 2466 L 2468
            +
Sbjct: 826  M 826


>ref|XP_002528114.1| double-stranded RNA binding protein, putative [Ricinus communis]
            gi|223532503|gb|EEF34293.1| double-stranded RNA binding
            protein, putative [Ricinus communis]
          Length = 786

 Score =  742 bits (1915), Expect = 0.0
 Identities = 434/852 (50%), Positives = 529/852 (62%), Gaps = 49/852 (5%)
 Frame = +3

Query: 129  MNRLGFKSMVFHGDFCLGEVEIFSTGKDQNFRFPNNEIRINYISPPGERCHPLSILQTIS 308
            M+RLGFKS VFHG+  LGE++      DQNF+FPNNEIRIN IS  GERC PLSILQTIS
Sbjct: 1    MSRLGFKSKVFHGELLLGELDAIPV-TDQNFQFPNNEIRINRISQSGERCPPLSILQTIS 59

Query: 309  PFTVRCKLKSVSTVEKCHLGTLYISCLHEQKTAIVLLGGEELHLVAMPSKQEKLLPCFWC 488
             F+VRCKL+S S +E+ HL  L+ SC +E KTA+V +G EE+HLVAMPSKQ+K  PCFWC
Sbjct: 60   SFSVRCKLESSSPIEQPHLINLHASCFYEFKTAVVSIGNEEIHLVAMPSKQKKF-PCFWC 118

Query: 489  CSVPIGRYGSCLSMLNLRCLAIVFDLDETLIVANTMKSFEDKIDSLQKRLECEDDPLRVQ 668
              VP+G Y SCL MLNLRCL+IVFDLDETLIVANTMKSFED+I++L+  +  E DP+R+ 
Sbjct: 119  FPVPLGLYDSCLGMLNLRCLSIVFDLDETLIVANTMKSFEDRIEALRVWINRETDPMRIS 178

Query: 669  GMSAELRRYVEDRSLLKQYTESDNVMDNGKLFTVQFEGVQSLLNNQEKVIRPVIRLKERN 848
            GMSAEL+RY++DR LLKQY ESD VMDNGK+F VQ E V      QE+++RPVIRL+++N
Sbjct: 179  GMSAELKRYMDDRMLLKQYLESDFVMDNGKMFKVQLEEVPLSSETQERLVRPVIRLQDKN 238

Query: 849  IVLTRINPEIRDTSVLVRLRPAWEELRSYLNAKGRKRFEVYVCTMAERDYALEMWRLLDP 1028
            IVLTRINPEIRDTSVLVRLRPAWEELRSYL AKGRKRFEVYVC                 
Sbjct: 239  IVLTRINPEIRDTSVLVRLRPAWEELRSYLTAKGRKRFEVYVC----------------- 281

Query: 1029 EAHLISSNQLLNRVVCVKSGSRKSLSSVFQDGTCHPKMAMVIDDRLKVWEDNDQPRVHVV 1208
                                SRKSL++VF +G CHPKMAMVIDDR KVWED DQPRVHVV
Sbjct: 282  --------------------SRKSLANVFHNGMCHPKMAMVIDDRSKVWEDKDQPRVHVV 321

Query: 1209 PAFTPYYAPQAETASAVPILFVARNVACNVRTGFFKEFDENILRRIFDLCYEDEVANIPY 1388
            PAFTPYYAPQAETA+AVP+L VARNVACNVR  FFKEFDEN+LRRI ++ YEDEV N+P 
Sbjct: 322  PAFTPYYAPQAETANAVPVLCVARNVACNVRGCFFKEFDENLLRRISEVFYEDEVNNLPL 381

Query: 1389 SPDVSDFLMSE------------------------------DETHTGDLAPPFITKIPDL 1478
            +PDVS++LMSE                              DE    D A   +T  P+L
Sbjct: 382  APDVSNYLMSEDASFVPNGNSNAPFNEGMSGVEVERRLNQSDEKSVTDSASHSMTNCPEL 441

Query: 1479 RLEASQQPLPMSPNVTSSEILRTNLPLHQSGLPEAPFNLEVNPSELDPFKRKKPTLQHGQ 1658
            R E +Q P+ + PNV         LP  +  L   P   ++                  Q
Sbjct: 442  RSEITQPPIAIIPNVVGPMSSTPLLPSQKPSLLGTPVRRDL----------------RNQ 485

Query: 1659 NSSDPSLLSRLPTNTSLPPIQSCGGWLVEEDLNMDHTNKRAAGSAQAHQNLPSSKLESIR 1838
             S  P LLSR+P       IQ  GGWLVEED++  H N R++G AQ    L S KL +  
Sbjct: 486  TSGQPPLLSRVPAPLPSSSIQPQGGWLVEEDISRAHINSRSSGFAQESDILKSDKLRTHL 545

Query: 1839 TGXXXXXXXXXXXXXXXRQEEKKQNHSQSNHSLLSEGEMSISQ-----ANKEPGTEAGK- 2000
                                + K         +  +G++ +SQ      ++E   EA K 
Sbjct: 546  NPFVHSTPVSASTSSVFHASQVK------GEEVCLKGKVGVSQNLVSSNSRESQNEAVKF 599

Query: 2001 ---APPPYIEVLLEIGQKCGSKIEFRSVVSTSKELQFSVEVLFTGDKIGAGMGKTKRDAQ 2171
               +    I VL EIG++C SK+EFRSVVSTSK+LQFSVEVLFTG+KIG GMGKT++DA 
Sbjct: 600  NLLSSHLSIGVLQEIGRRCNSKVEFRSVVSTSKDLQFSVEVLFTGEKIGIGMGKTRKDAH 659

Query: 2172 YQAAEDALRTLAAEYRAYVGLNSGSVDRDSEMPFPRNENGFLWD---DPESDELP----L 2330
             QAAE+ALR LA +Y AY+  +SG+VD D +     NENGFLWD      S+ +P     
Sbjct: 660  QQAAENALRCLAEKYVAYITPHSGAVDHDFDKLSIGNENGFLWDIVNSGSSETVPEDGVT 719

Query: 2331 KQALPDAHTSEAGGGAIPGLKSFGTQDARKRGNSPRQDETVQNKRLKGEF---APRSQIA 2501
            K+  P+ +  E G      L +   Q  +KR NSPR  +++ NKR K E     P+S + 
Sbjct: 720  KERTPEDNEVEPG----ITLSNLVNQQQQKRANSPRLQQSIPNKRSKEEVVRGGPQS-LP 774

Query: 2502 SSQQHKNGSTVS 2537
            SS+Q KNG   S
Sbjct: 775  SSRQQKNGHHAS 786