BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00016662
         (1653 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002308787.1| f-box family protein [Populus trichocarpa] g...    82   1e-18
ref|XP_003610528.1| F-box family protein [Medicago truncatula] g...    84   2e-18
ref|XP_003534732.1| PREDICTED: F-box protein CPR30-like [Glycine...    87   3e-18
ref|XP_003546182.1| PREDICTED: F-box protein CPR30-like [Glycine...    84   9e-17
ref|XP_002526119.1| ubiquitin-protein ligase, putative [Ricinus ...    77   9e-16

>ref|XP_002308787.1| f-box family protein [Populus trichocarpa]
           gi|222854763|gb|EEE92310.1| f-box family protein
           [Populus trichocarpa]
          Length = 396

 Score = 81.6 bits (200), Expect(2) = 1e-18
 Identities = 71/284 (25%), Positives = 128/284 (45%), Gaps = 12/284 (4%)
 Frame = +3

Query: 6   RCVCKPWCNLTTDSSFTKFTSLDPSKKAILVS*LLNPNSLKTCLIVYLRIQITMEMKSTR 185
           R V KPWC L    +F K               L   +S+ T   +Y+ ++ T  +    
Sbjct: 25  RSVSKPWCALIDGPNFVK---------------LHLKHSMDTSSNLYIILRTTSHVHYMD 69

Query: 186 MQLI*RRQLI*EID*N*RSIGAFFDSYNY--KIVGFCNGVVCLGRK-NQVCLINPYTREY 356
            +    + L+       + +      YN+  K++G  NG++C+    + + + NP TR++
Sbjct: 70  FE----QNLVLNDCVTLKELNHPLMCYNHGIKVLGSVNGLLCISNVVDDIAVWNPSTRKH 125

Query: 357 KIVEFEKDFGFGREVGIHPDANYYFG--YDTTSEDYTLVQFVE-----SENYDSEINVYL 515
           ++V F       R  G    + Y FG  YD+  +DY LV+  +       +++SE+ VY 
Sbjct: 126 RVVPF-LPIELKRYFGTKSCSVYVFGFGYDSVRDDYKLVRIAQFGGGGKRSFESEVKVYS 184

Query: 516 LGDTSCSTVSNVPYKLLTAEQPGTVLNGSHHWVA--NNKYKYPELVISFDIGKKVIREIP 689
           L   S   + ++PY +      G   NG+ HWV   N +     +V++ D+G +  RE+ 
Sbjct: 185 LRKQSWRRIGDMPYCVHYPGANGVFANGALHWVVGENPESNVANIVVALDLGVEDYREVL 244

Query: 690 RPDYVGKXXXXXXXXXYVVRGKLALFKRYSIGAIKFEIWVMKKY 821
           +P+Y  K          V+RG L     + +G  + ++W+MK+Y
Sbjct: 245 QPEYKDKNFYIDLG---VLRGCLCFLANF-LGE-RVDVWMMKEY 283



 Score = 39.3 bits (90), Expect(2) = 1e-18
 Identities = 33/106 (31%), Positives = 52/106 (49%), Gaps = 2/106 (1%)
 Frame = +1

Query: 883  WVMKKYGAWDSWCKLFSTNTGFQYSIYNYPKRQKYSINKPFPSYFAEWMSRRPLYFTEDA 1062
            W+MK+YG  +SW KLFS     QY +  + +                  S +PL +++  
Sbjct: 278  WMMKEYGVKESWTKLFSV---AQYEVIGFLR------------------SLKPLAYSKSG 316

Query: 1063 -EVLLKDDN-DLVMCNLKKRTARNLETLVTDWSNRIVTHVASLISL 1194
             EVL++ DN DL   +LK++  +N    +  +S    T V SLIS+
Sbjct: 317  DEVLIEHDNLDLCWYDLKRKQVKNRIPGI-PYSFEADTFVESLISV 361


>ref|XP_003610528.1| F-box family protein [Medicago truncatula]
           gi|355511583|gb|AES92725.1| F-box family protein
           [Medicago truncatula]
          Length = 392

 Score = 84.3 bits (207), Expect(2) = 2e-18
 Identities = 58/201 (28%), Positives = 103/201 (51%), Gaps = 14/201 (6%)
 Frame = +3

Query: 261 SYNYKIVGFCNGVVCLGR-KNQVCLINPYTREYKIVEFE----KDFGFGREVGIHPDANY 425
           S   K++G CNG++C+    + +   NP  R+++I+  E    K+      +     A+ 
Sbjct: 83  SNRIKVLGSCNGLLCICNIADDIAFWNPTIRKHRIIPSEPLIRKETNENNTITTLLAAHV 142

Query: 426 Y-FGYDTTSEDYTLVQ---FVESEN--YDSEINVYLLGDTSCSTVSNVPYKLLTAEQPGT 587
           Y FGYD+ ++DY LV    FV+  N  +DS + +Y +      T+ ++PY L  A   G 
Sbjct: 143 YGFGYDSATDDYKLVSISYFVDLHNRSFDSHVKIYTMRTDVWKTLPSMPYALCCARTMGV 202

Query: 588 VLNGSHHWVANNKYKYPE---LVISFDIGKKVIREIPRPDYVGKXXXXXXXXXYVVRGKL 758
            ++G+ HWV     + PE   L+++FD+  +V RE+  P   G           ++RG L
Sbjct: 203 FVSGALHWVVTRDLE-PESRDLIVAFDLRFEVFREVALP---GTVDGKFDMDVALLRGML 258

Query: 759 ALFKRYSIGAIKFEIWVMKKY 821
            + +  + G+  F++WVM++Y
Sbjct: 259 CIIE--NRGSDGFDVWVMREY 277



 Score = 35.8 bits (81), Expect(2) = 2e-18
 Identities = 15/38 (39%), Positives = 21/38 (55%)
 Frame = +1

Query: 883 WVMKKYGAWDSWCKLFSTNTGFQYSIYNYPKRQKYSIN 996
           WVM++YG+ DSWCK+F+        +    K   YS N
Sbjct: 272 WVMREYGSHDSWCKMFTVGQPRDVKLMKSLKPLGYSRN 309


>ref|XP_003534732.1| PREDICTED: F-box protein CPR30-like [Glycine max]
          Length = 392

 Score = 87.0 bits (214), Expect(2) = 3e-18
 Identities = 55/201 (27%), Positives = 98/201 (48%), Gaps = 14/201 (6%)
 Frame = +3

Query: 261 SYNYKIVGFCNGVVCLGR-KNQVCLINPYTREYKIVEFEKDFGFGREVGIHPDAN----- 422
           S N  ++G CNG++C+    + +   NP  R+++I+         R   +HPD       
Sbjct: 88  SNNITLLGSCNGLLCISNVADDIAFWNPSLRQHRILP---SLPLPRR-RLHPDTTLFAAR 143

Query: 423 -YYFGYDTTSEDYTLVQF-----VESENYDSEINVYLLGDTSCSTVSNVPYKLLTAEQPG 584
            Y FG+D TS DY LV+      ++  ++DS++ +Y L   +  T+ ++PY L  A   G
Sbjct: 144 VYGFGFDHTSPDYKLVRISYFVDLQDRSFDSQVKLYTLRANAWKTLPSMPYALCCARTMG 203

Query: 585 TVLNGSHHWVANNKYK--YPELVISFDIGKKVIREIPRPDYVGKXXXXXXXXXYVVRGKL 758
             +  S HWV   K +   P+L+++FD+  ++  E+P PD  G           ++   L
Sbjct: 204 VFVGNSLHWVVTRKLEPDQPDLIVAFDLTHEIFTELPLPD-TGGVGGGFEIDVALLGDSL 262

Query: 759 ALFKRYSIGAIKFEIWVMKKY 821
            +   +     K ++WVM++Y
Sbjct: 263 CMTVNFHNS--KMDVWVMREY 281



 Score = 32.7 bits (73), Expect(2) = 3e-18
 Identities = 11/17 (64%), Positives = 14/17 (82%)
 Frame = +1

Query: 883 WVMKKYGAWDSWCKLFS 933
           WVM++Y   DSWCKLF+
Sbjct: 276 WVMREYNRGDSWCKLFT 292


>ref|XP_003546182.1| PREDICTED: F-box protein CPR30-like [Glycine max]
          Length = 394

 Score = 83.6 bits (205), Expect(2) = 9e-17
 Identities = 52/201 (25%), Positives = 96/201 (47%), Gaps = 14/201 (6%)
 Frame = +3

Query: 261 SYNYKIVGFCNGVVCLGR-KNQVCLINPYTREYKIVEFEKDFGFGREVGIHPDANYY--- 428
           S +  ++G CNG++C+    + +   NP  R+++I+ +            HPD   +   
Sbjct: 88  SNSITLLGSCNGLLCISNVADDIAFWNPSLRQHRILPY-----LPVPRRRHPDTTLFAAR 142

Query: 429 ---FGYDTTSEDYTLVQF-----VESENYDSEINVYLLGDTSCSTVSNVPYKLLTAEQPG 584
              FG+D  + DY LV+      +   ++DS++ +Y L   +  T+ ++PY L  A   G
Sbjct: 143 VCGFGFDHKTRDYKLVRISYFVDLHDRSFDSQVKLYTLRANAWKTLPSLPYALCCARTMG 202

Query: 585 TVLNGSHHWVANNKYK--YPELVISFDIGKKVIREIPRPDYVGKXXXXXXXXXYVVRGKL 758
             +  S HWV   K +   P+L+I+FD+   + RE+P PD  G           ++ G L
Sbjct: 203 VFVGNSLHWVVTRKLEPDQPDLIIAFDLTHDIFRELPLPD-TGGVDGGFEIDLALLGGSL 261

Query: 759 ALFKRYSIGAIKFEIWVMKKY 821
            +   +     + ++WVM++Y
Sbjct: 262 CMTVNFH--KTRIDVWVMREY 280



 Score = 31.2 bits (69), Expect(2) = 9e-17
 Identities = 10/17 (58%), Positives = 14/17 (82%)
 Frame = +1

Query: 883 WVMKKYGAWDSWCKLFS 933
           WVM++Y   DSWCK+F+
Sbjct: 275 WVMREYNRRDSWCKVFT 291


>ref|XP_002526119.1| ubiquitin-protein ligase, putative [Ricinus communis]
           gi|223534616|gb|EEF36313.1| ubiquitin-protein ligase,
           putative [Ricinus communis]
          Length = 414

 Score = 77.4 bits (189), Expect(2) = 9e-16
 Identities = 50/198 (25%), Positives = 99/198 (50%), Gaps = 11/198 (5%)
 Frame = +3

Query: 261 SYNYKIVGFCNGVVCLGR-KNQVCLINPYTREYKIVEFEKDFGFGREVGIHPDANYYFGY 437
           S+N KIVG CNG++C G    ++ L+NP TR++K++ F +     +   +     + FG 
Sbjct: 93  SHNIKIVGSCNGLLCFGNASGRITLMNPSTRKHKVLPFLRMDASVKGKSVWGAWAFGFGC 152

Query: 438 DTTSEDYTLVQF-----VESENYDSEINVYLLGDTSCSTVSNVPYKLLTAEQPGTVLNGS 602
           D+  +DY +++         + ++++  VY L   S   +  +   +   ++ G ++  +
Sbjct: 153 DSVHDDYKVIRLGQYLDFSLQQFETDTMVYSLKSNSWRKIDGMSCIIGFDQKMGVLVGEA 212

Query: 603 HHWVANNK--YKYPELVISFDIGKKVIREIPRPDYV---GKXXXXXXXXXYVVRGKLALF 767
            HW+A+       P+++++ ++G +  RE+P PD V               VV   L++F
Sbjct: 213 LHWLASRDRILLNPDVIVALNLGVEDFREVPGPDVVVVGANPNQNPSLNLGVVEEWLSVF 272

Query: 768 KRYSIGAIKFEIWVMKKY 821
             Y+    + +IWVMK+Y
Sbjct: 273 AIYN--NTRLDIWVMKEY 288



 Score = 33.9 bits (76), Expect(2) = 9e-16
 Identities = 13/17 (76%), Positives = 15/17 (88%)
 Frame = +1

Query: 883 WVMKKYGAWDSWCKLFS 933
           WVMK+YGA DSW +LFS
Sbjct: 283 WVMKEYGAKDSWTRLFS 299