BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00016658
         (885 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002270439.2| PREDICTED: pentatricopeptide repeat-containi...   198   1e-48
emb|CBI17228.3| unnamed protein product [Vitis vinifera]              198   1e-48
ref|XP_004139010.1| PREDICTED: pentatricopeptide repeat-containi...   168   2e-39
ref|XP_002518071.1| pentatricopeptide repeat-containing protein,...   168   2e-39
ref|XP_002300166.1| predicted protein [Populus trichocarpa] gi|2...   156   7e-36

>ref|XP_002270439.2| PREDICTED: pentatricopeptide repeat-containing protein
           At1g04840-like [Vitis vinifera]
          Length = 677

 Score =  198 bits (504), Expect = 1e-48
 Identities = 106/192 (55%), Positives = 130/192 (67%)
 Frame = -3

Query: 577 PLLSETKNTLTKTHLSRIPSLPTHFSSQQDQETHFISLIHASKTTKXXXXXXXXXXXXXX 398
           P  + T  T T+ H              +  ETHFI LIHAS T                
Sbjct: 20  PAKTTTVTTTTRAH-----------GPSRSPETHFIPLIHASNTLPQLHQIHAQIFLHNL 68

Query: 397 XXXSRIVTQLISSSSTFKSIDYPLSIFRHFHDPNLFLFNSIIRGLFENTQYKNSVSHFVL 218
              SR+VTQLISSS + KS+DY LSIFR F  PNLF+FN++IRGL EN++++ SVSHFVL
Sbjct: 69  FSNSRVVTQLISSSCSLKSLDYALSIFRCFDHPNLFVFNALIRGLAENSRFEGSVSHFVL 128

Query: 217 MLKVNVLPDRLTFPFVLKSAAALVELRLGRALHGQINRRGIEFDSFVRVSLVDMYVKLGH 38
           ML++++ PDRLT PFVLKS AALV++ LGR LHG + + G+EFDSFVRVSLVDMYVK+G 
Sbjct: 129 MLRLSIRPDRLTLPFVLKSVAALVDVGLGRCLHGGVMKLGLEFDSFVRVSLVDMYVKIGE 188

Query: 37  LNFGLQLFDETP 2
           L FGLQLFDE+P
Sbjct: 189 LGFGLQLFDESP 200



 Score = 56.6 bits (135), Expect = 7e-06
 Identities = 29/112 (25%), Positives = 58/112 (51%)
 Frame = -3

Query: 340 IDYPLSIFRHFHDPNLFLFNSIIRGLFENTQYKNSVSHFVLMLKVNVLPDRLTFPFVLKS 161
           +D    +F    + N+  + ++I G  +N  ++ ++S F  ML+  V P+ LT    L +
Sbjct: 255 LDRARELFVQMPEKNVVSWTTMINGFSQNGDHEKALSMFWRMLEEGVRPNDLTVVSALLA 314

Query: 160 AAALVELRLGRALHGQINRRGIEFDSFVRVSLVDMYVKLGHLNFGLQLFDET 5
              +  L++G  +H  ++  G + +  +  +LVDMY K G++    ++F ET
Sbjct: 315 CTKIGALQVGERIHNYLSSNGFQLNRGIGTALVDMYAKCGNIKSASRVFVET 366


>emb|CBI17228.3| unnamed protein product [Vitis vinifera]
          Length = 590

 Score =  198 bits (504), Expect = 1e-48
 Identities = 106/192 (55%), Positives = 130/192 (67%)
 Frame = -3

Query: 577 PLLSETKNTLTKTHLSRIPSLPTHFSSQQDQETHFISLIHASKTTKXXXXXXXXXXXXXX 398
           P  + T  T T+ H              +  ETHFI LIHAS T                
Sbjct: 20  PAKTTTVTTTTRAH-----------GPSRSPETHFIPLIHASNTLPQLHQIHAQIFLHNL 68

Query: 397 XXXSRIVTQLISSSSTFKSIDYPLSIFRHFHDPNLFLFNSIIRGLFENTQYKNSVSHFVL 218
              SR+VTQLISSS + KS+DY LSIFR F  PNLF+FN++IRGL EN++++ SVSHFVL
Sbjct: 69  FSNSRVVTQLISSSCSLKSLDYALSIFRCFDHPNLFVFNALIRGLAENSRFEGSVSHFVL 128

Query: 217 MLKVNVLPDRLTFPFVLKSAAALVELRLGRALHGQINRRGIEFDSFVRVSLVDMYVKLGH 38
           ML++++ PDRLT PFVLKS AALV++ LGR LHG + + G+EFDSFVRVSLVDMYVK+G 
Sbjct: 129 MLRLSIRPDRLTLPFVLKSVAALVDVGLGRCLHGGVMKLGLEFDSFVRVSLVDMYVKIGE 188

Query: 37  LNFGLQLFDETP 2
           L FGLQLFDE+P
Sbjct: 189 LGFGLQLFDESP 200


>ref|XP_004139010.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g04840-like [Cucumis sativus]
           gi|449505311|ref|XP_004162432.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At1g04840-like [Cucumis sativus]
          Length = 679

 Score =  168 bits (425), Expect = 2e-39
 Identities = 95/180 (52%), Positives = 119/180 (66%), Gaps = 4/180 (2%)
 Frame = -3

Query: 529 RIPSLPTHFSSQQDQ----ETHFISLIHASKTTKXXXXXXXXXXXXXXXXXSRIVTQLIS 362
           RI    + FSS        ETHFI LIHAS +T                  SR+VTQ IS
Sbjct: 23  RIAFFSSMFSSSSPPISFLETHFIDLIHASNSTHKLRQIHGQLYRCNVFSSSRVVTQFIS 82

Query: 361 SSSTFKSIDYPLSIFRHFHDPNLFLFNSIIRGLFENTQYKNSVSHFVLMLKVNVLPDRLT 182
           S S+  S+DY +SIF+ F   N +LFN++IRGL EN+++++S+S FVLMLK  + PDRLT
Sbjct: 83  SCSSLNSVDYAISIFQRFELKNSYLFNALIRGLAENSRFESSISFFVLMLKWKISPDRLT 142

Query: 181 FPFVLKSAAALVELRLGRALHGQINRRGIEFDSFVRVSLVDMYVKLGHLNFGLQLFDETP 2
           FPFVLKSAAAL    +GRALH  I + G+EFDSFVRVSLVDMYVK+  L   L++FDE+P
Sbjct: 143 FPFVLKSAAALSNGGVGRALHCGILKFGLEFDSFVRVSLVDMYVKVEELGSALKVFDESP 202


>ref|XP_002518071.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223542667|gb|EEF44204.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 404

 Score =  168 bits (425), Expect = 2e-39
 Identities = 95/196 (48%), Positives = 125/196 (63%)
 Frame = -3

Query: 589 MKAFPLLSETKNTLTKTHLSRIPSLPTHFSSQQDQETHFISLIHASKTTKXXXXXXXXXX 410
           M++   L +++ +  KT  S+  SL T  SSQ   ETH I LIH+SKT            
Sbjct: 1   MRSLHALFKSRTSPAKTTSSKSTSL-TKASSQNQIETHIIPLIHSSKTALQLHQIHTQIL 59

Query: 409 XXXXXXXSRIVTQLISSSSTFKSIDYPLSIFRHFHDPNLFLFNSIIRGLFENTQYKNSVS 230
                  S I  QLISSSS  KSI Y LSIF  +H  NL+LFN++IRGL +N +Y +S+ 
Sbjct: 60  LHNLSSSSHITAQLISSSSLRKSIAYSLSIFNSYHPKNLYLFNALIRGLTDNYRYLDSID 119

Query: 229 HFVLMLKVNVLPDRLTFPFVLKSAAALVELRLGRALHGQINRRGIEFDSFVRVSLVDMYV 50
           HF+L+L+ ++ PD LTF FVLKS A+L    L RALHG I R G+EFDSFVR+S+VD+YV
Sbjct: 120 HFILLLRSDIKPDHLTFSFVLKSIASLSLKGLARALHGMILRCGLEFDSFVRISMVDVYV 179

Query: 49  KLGHLNFGLQLFDETP 2
           KL  +   L++FDE+P
Sbjct: 180 KLEEVKLALKVFDESP 195


>ref|XP_002300166.1| predicted protein [Populus trichocarpa] gi|222847424|gb|EEE84971.1|
           predicted protein [Populus trichocarpa]
          Length = 719

 Score =  156 bits (394), Expect = 7e-36
 Identities = 92/193 (47%), Positives = 115/193 (59%), Gaps = 3/193 (1%)
 Frame = -3

Query: 571 LSETKNTLTKTHLSRI---PSLPTHFSSQQDQETHFISLIHASKTTKXXXXXXXXXXXXX 401
           +S+T     K+ LS +   P+ PT        E HFISLIH SKT               
Sbjct: 57  ISKTSENKPKSSLSALFIPPTTPT--------EAHFISLIHGSKTILQLHQIHAQIIIHN 108

Query: 400 XXXXSRIVTQLISSSSTFKSIDYPLSIFRHFHDPNLFLFNSIIRGLFENTQYKNSVSHFV 221
               S I TQLISSSS  KSI++ L++F H    NLF FN++IRGL  N+ + N++ HF 
Sbjct: 109 LSSSSLITTQLISSSSLRKSINHSLAVFNHHKPKNLFTFNALIRGLTTNSHFFNAIFHFR 168

Query: 220 LMLKVNVLPDRLTFPFVLKSAAALVELRLGRALHGQINRRGIEFDSFVRVSLVDMYVKLG 41
           LML+  + PDRLT+PFVLKS A L    LG A+H  I R GIE DSFVRVSLVDMYVK+ 
Sbjct: 169 LMLRSGIKPDRLTYPFVLKSMAGLFSTELGMAIHCMILRCGIELDSFVRVSLVDMYVKVE 228

Query: 40  HLNFGLQLFDETP 2
            L    ++FDE+P
Sbjct: 229 KLGSAFKVFDESP 241