BLASTX nr result

ID: Cimicifuga21_contig00016652 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00016652
         (1266 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002302040.1| predicted protein [Populus trichocarpa] gi|1...   550   e-154
ref|XP_002306858.1| predicted protein [Populus trichocarpa] gi|2...   550   e-154
ref|XP_004151988.1| PREDICTED: probable arabinose 5-phosphate is...   548   e-153
ref|XP_002532039.1| Polysialic acid capsule expression protein k...   545   e-152
ref|XP_002277616.1| PREDICTED: probable arabinose 5-phosphate is...   539   e-151

>ref|XP_002302040.1| predicted protein [Populus trichocarpa] gi|118483855|gb|ABK93818.1|
            unknown [Populus trichocarpa] gi|222843766|gb|EEE81313.1|
            predicted protein [Populus trichocarpa]
          Length = 341

 Score =  550 bits (1417), Expect = e-154
 Identities = 278/342 (81%), Positives = 303/342 (88%)
 Frame = -3

Query: 1219 MGSLPQCSDSSTPPKQTXXXXXXXXXXXLFKSQQKYLNFFFQNLDRSQTLTFTQTLLNAK 1040
            MGSLP   D  +P  ++            FKSQQ +LN+FF+NLD SQTLTFTQTLL+  
Sbjct: 1    MGSLPPSLDLPSPNAKSQQIDQTTLLNL-FKSQQNHLNYFFRNLDLSQTLTFTQTLLHCN 59

Query: 1039 GTIFFTGVGKSGFVAQKISQTLVSLGIRSGFLSPIDALHGDIGILSKIDQVVFFSKSGNT 860
            GTIFF+GVGKSGFVA KISQTL+SLGIR+GFLSP+DALHGDIG LS  D +V FSKSGNT
Sbjct: 60   GTIFFSGVGKSGFVANKISQTLISLGIRAGFLSPLDALHGDIGALSASDILVLFSKSGNT 119

Query: 859  EELLKLVPCAKAKGAFLISVTSSEGNLLSGVCDLNVHLPLERELCPFDLAPVTSTAIQMV 680
            EELL+LVPCAKAKGA+L+SVTS EGN L+ VCDLNV LPLERELCPFDLAPVTSTAIQMV
Sbjct: 120  EELLRLVPCAKAKGAYLVSVTSVEGNALTAVCDLNVRLPLERELCPFDLAPVTSTAIQMV 179

Query: 679  FGDTVAIALMGARNLTKEEYAANHPAGRIGKSLIFKVKDVMKKQDELPVCKEGDMIMDQL 500
            FGDTVAIALMGARNL+KEEYAANHPAGRIGKSLIFKVKDVMKKQ+ELP+CKEGD+IMDQL
Sbjct: 180  FGDTVAIALMGARNLSKEEYAANHPAGRIGKSLIFKVKDVMKKQNELPICKEGDLIMDQL 239

Query: 499  VELTSKGCGCLLVIDDEHHLIGTFTDGDLRRTLKASKEGIFKLTVGEMCNRKPRTIGPDA 320
            VELTSKGCGCLLVID+EHHLIGTFTDGDLRRTLKAS E IFKLTVGEMCNR PRTIGPDA
Sbjct: 240  VELTSKGCGCLLVIDEEHHLIGTFTDGDLRRTLKASGEAIFKLTVGEMCNRNPRTIGPDA 299

Query: 319  MAVEAMEKMESPPSPVQFLPVVNHQNVVIGIVTLHGLVSAGL 194
            MAVEAM+KMESPPSPVQFLPV+   N++IGIVTLHGLVSAGL
Sbjct: 300  MAVEAMKKMESPPSPVQFLPVIKDDNILIGIVTLHGLVSAGL 341


>ref|XP_002306858.1| predicted protein [Populus trichocarpa] gi|222856307|gb|EEE93854.1|
            predicted protein [Populus trichocarpa]
          Length = 341

 Score =  550 bits (1416), Expect = e-154
 Identities = 278/342 (81%), Positives = 303/342 (88%)
 Frame = -3

Query: 1219 MGSLPQCSDSSTPPKQTXXXXXXXXXXXLFKSQQKYLNFFFQNLDRSQTLTFTQTLLNAK 1040
            MGSLP   D  +P  +            LFKSQQ +LN+FFQNL+ SQ LTFTQTLLN  
Sbjct: 1    MGSLPPFLDLPSPDAK-FQQIDQTTLLNLFKSQQNHLNYFFQNLNLSQALTFTQTLLNCN 59

Query: 1039 GTIFFTGVGKSGFVAQKISQTLVSLGIRSGFLSPIDALHGDIGILSKIDQVVFFSKSGNT 860
            GTIFF+GVGKSGFVA KISQTL+SLGIR+GFLSP+DALHGDIG LS  D +V FSKSGNT
Sbjct: 60   GTIFFSGVGKSGFVANKISQTLISLGIRAGFLSPVDALHGDIGALSSSDILVLFSKSGNT 119

Query: 859  EELLKLVPCAKAKGAFLISVTSSEGNLLSGVCDLNVHLPLERELCPFDLAPVTSTAIQMV 680
            EELL+LVPCAKAKGA+L+SVTS EGN L+ VCD+NVHLPLERELCPFDLAPVTSTAIQMV
Sbjct: 120  EELLRLVPCAKAKGAYLVSVTSVEGNALTAVCDMNVHLPLERELCPFDLAPVTSTAIQMV 179

Query: 679  FGDTVAIALMGARNLTKEEYAANHPAGRIGKSLIFKVKDVMKKQDELPVCKEGDMIMDQL 500
            FGDTVAIALMGARNL+KEEYAANHPAGRIGKSLIFKVKDVMKKQ+ELP+CKEGD+IMDQL
Sbjct: 180  FGDTVAIALMGARNLSKEEYAANHPAGRIGKSLIFKVKDVMKKQNELPICKEGDLIMDQL 239

Query: 499  VELTSKGCGCLLVIDDEHHLIGTFTDGDLRRTLKASKEGIFKLTVGEMCNRKPRTIGPDA 320
            VELTSKGCGCLLVID++ HLIGTFTDGDLRRTLKAS EGIFKLTVGEMCNR PRTIGPDA
Sbjct: 240  VELTSKGCGCLLVIDEDSHLIGTFTDGDLRRTLKASGEGIFKLTVGEMCNRNPRTIGPDA 299

Query: 319  MAVEAMEKMESPPSPVQFLPVVNHQNVVIGIVTLHGLVSAGL 194
            MAVEAM+KMESPPSPVQFLPV+   N++IGIVTLHGLVSAGL
Sbjct: 300  MAVEAMKKMESPPSPVQFLPVIKDDNILIGIVTLHGLVSAGL 341


>ref|XP_004151988.1| PREDICTED: probable arabinose 5-phosphate isomerase-like [Cucumis
            sativus] gi|449524494|ref|XP_004169257.1| PREDICTED:
            probable arabinose 5-phosphate isomerase-like [Cucumis
            sativus]
          Length = 348

 Score =  548 bits (1412), Expect = e-153
 Identities = 282/350 (80%), Positives = 305/350 (87%), Gaps = 8/350 (2%)
 Frame = -3

Query: 1219 MGSLPQCSDSSTP--------PKQTXXXXXXXXXXXLFKSQQKYLNFFFQNLDRSQTLTF 1064
            MGSLP  SD S          P QT            FKSQQ +LNFFFQNLD SQTL F
Sbjct: 1    MGSLPSSSDISLSSSLFPEKSPNQTSINESTLLNL--FKSQQNHLNFFFQNLDLSQTLKF 58

Query: 1063 TQTLLNAKGTIFFTGVGKSGFVAQKISQTLVSLGIRSGFLSPIDALHGDIGILSKIDQVV 884
            T TLLN+ GTIFF+GVGKSGFVA+KISQTLVSLGIRS FLSP+DALHGDIGIL+  D +V
Sbjct: 59   TATLLNSPGTIFFSGVGKSGFVARKISQTLVSLGIRSAFLSPLDALHGDIGILNSGDVLV 118

Query: 883  FFSKSGNTEELLKLVPCAKAKGAFLISVTSSEGNLLSGVCDLNVHLPLERELCPFDLAPV 704
             FSKSGNTEELL+LVPCA+AKGAFLI+VTS EGN+L GVCD+NVHLPLERELCPFDLAPV
Sbjct: 119  MFSKSGNTEELLRLVPCARAKGAFLIAVTSVEGNVLGGVCDMNVHLPLERELCPFDLAPV 178

Query: 703  TSTAIQMVFGDTVAIALMGARNLTKEEYAANHPAGRIGKSLIFKVKDVMKKQDELPVCKE 524
            TSTAIQMVFGDTVAIALMGARNLTKEEYA NHPAGRIGKSLIF+VKDVMKKQ+ELPVCKE
Sbjct: 179  TSTAIQMVFGDTVAIALMGARNLTKEEYATNHPAGRIGKSLIFRVKDVMKKQNELPVCKE 238

Query: 523  GDMIMDQLVELTSKGCGCLLVIDDEHHLIGTFTDGDLRRTLKASKEGIFKLTVGEMCNRK 344
            GD+IMDQLVELTSKGCGCLLVIDDE+ LIGTFTDGDLRRTLKAS E IFKLTVGEMCNRK
Sbjct: 239  GDLIMDQLVELTSKGCGCLLVIDDEYRLIGTFTDGDLRRTLKASGEAIFKLTVGEMCNRK 298

Query: 343  PRTIGPDAMAVEAMEKMESPPSPVQFLPVVNHQNVVIGIVTLHGLVSAGL 194
            PRTI P+AMAV+AM+KME+PPSPVQFLPV+N Q ++IGIVTLHGLVSAGL
Sbjct: 299  PRTIDPEAMAVDAMKKMEAPPSPVQFLPVINQQTILIGIVTLHGLVSAGL 348


>ref|XP_002532039.1| Polysialic acid capsule expression protein kpsF, putative [Ricinus
            communis] gi|223528309|gb|EEF30355.1| Polysialic acid
            capsule expression protein kpsF, putative [Ricinus
            communis]
          Length = 340

 Score =  545 bits (1403), Expect = e-152
 Identities = 277/342 (80%), Positives = 305/342 (89%)
 Frame = -3

Query: 1219 MGSLPQCSDSSTPPKQTXXXXXXXXXXXLFKSQQKYLNFFFQNLDRSQTLTFTQTLLNAK 1040
            MGSL   S    P  Q+            FKSQQ +LN+FFQNLD SQTL+FTQTLLN++
Sbjct: 1    MGSLDLPSPIPDPKSQSQIDQNTLLNL--FKSQQNHLNYFFQNLDISQTLSFTQTLLNSR 58

Query: 1039 GTIFFTGVGKSGFVAQKISQTLVSLGIRSGFLSPIDALHGDIGILSKIDQVVFFSKSGNT 860
            GTI FTGVGKSGFVA KISQTLVSLGIR+GFLSP+DALHGDIGIL+  D +V FSKSGNT
Sbjct: 59   GTILFTGVGKSGFVANKISQTLVSLGIRAGFLSPVDALHGDIGILTPRDILVMFSKSGNT 118

Query: 859  EELLKLVPCAKAKGAFLISVTSSEGNLLSGVCDLNVHLPLERELCPFDLAPVTSTAIQMV 680
            +ELL+LVPCAKAKGAFL+SVTS EGN L+ V D+NV+LPLERELCPFDLAPVTSTAIQMV
Sbjct: 119  DELLRLVPCAKAKGAFLVSVTSVEGNALAMVSDMNVYLPLERELCPFDLAPVTSTAIQMV 178

Query: 679  FGDTVAIALMGARNLTKEEYAANHPAGRIGKSLIFKVKDVMKKQDELPVCKEGDMIMDQL 500
            FGDT+AIALMGARNL+K+EYAANHPAGRIGKSLIFKVKDVMKKQDELPVCKEGD+IMDQL
Sbjct: 179  FGDTIAIALMGARNLSKDEYAANHPAGRIGKSLIFKVKDVMKKQDELPVCKEGDLIMDQL 238

Query: 499  VELTSKGCGCLLVIDDEHHLIGTFTDGDLRRTLKASKEGIFKLTVGEMCNRKPRTIGPDA 320
            VELTS+GCGCLLVID+E+HLIGTFTDGDLRRTLKAS E IFKLTVGEMCNR PRTIGPDA
Sbjct: 239  VELTSRGCGCLLVIDEEYHLIGTFTDGDLRRTLKASGEAIFKLTVGEMCNRNPRTIGPDA 298

Query: 319  MAVEAMEKMESPPSPVQFLPVVNHQNVVIGIVTLHGLVSAGL 194
            MAVEAM+KMESPPSPVQFLPV++ +N+VIGIVTLHGLVSAGL
Sbjct: 299  MAVEAMKKMESPPSPVQFLPVIDQKNIVIGIVTLHGLVSAGL 340


>ref|XP_002277616.1| PREDICTED: probable arabinose 5-phosphate isomerase [Vitis vinifera]
          Length = 340

 Score =  539 bits (1389), Expect = e-151
 Identities = 277/344 (80%), Positives = 302/344 (87%), Gaps = 2/344 (0%)
 Frame = -3

Query: 1219 MGSLPQCSDSSTPPKQTXXXXXXXXXXXLFKSQQKYLNFFFQNLDRSQTLTFTQTLLNAK 1040
            MGSLP  SD+ +  K+             FK+QQKYLNFFF NLD +QTL FTQTLL  +
Sbjct: 1    MGSLPSFSDAHSHFKEINTTELMNL----FKTQQKYLNFFFHNLDLNQTLIFTQTLLKIE 56

Query: 1039 GTIFFTGVGKSGFVAQKISQTLVSLGIRSGFLSPIDALHGDIGILS--KIDQVVFFSKSG 866
            GTIFFTGVGKSGFVAQKISQTLVSLGIR+ FLSP+DALHGDIGILS    + VVFFSKSG
Sbjct: 57   GTIFFTGVGKSGFVAQKISQTLVSLGIRASFLSPVDALHGDIGILSGGTSNAVVFFSKSG 116

Query: 865  NTEELLKLVPCAKAKGAFLISVTSSEGNLLSGVCDLNVHLPLERELCPFDLAPVTSTAIQ 686
            N+EELLKL PCAKAKGA+LISVTS+E NLL  VCDLNVHLPLERELCPFDLAPVTST IQ
Sbjct: 117  NSEELLKLAPCAKAKGAYLISVTSTEDNLLRAVCDLNVHLPLERELCPFDLAPVTSTTIQ 176

Query: 685  MVFGDTVAIALMGARNLTKEEYAANHPAGRIGKSLIFKVKDVMKKQDELPVCKEGDMIMD 506
            MVFGDTVA+ALMGARNLT++EYAANHPAGRIGKSLIFKVKDVMKKQDELPVCKEGD+IMD
Sbjct: 177  MVFGDTVAVALMGARNLTRDEYAANHPAGRIGKSLIFKVKDVMKKQDELPVCKEGDLIMD 236

Query: 505  QLVELTSKGCGCLLVIDDEHHLIGTFTDGDLRRTLKASKEGIFKLTVGEMCNRKPRTIGP 326
            QLVELTSKGCGCLLVIDDE+ LIGTFTDGDLRRTLKAS EGIFKLTVG+MCNR PRTI  
Sbjct: 237  QLVELTSKGCGCLLVIDDEYRLIGTFTDGDLRRTLKASGEGIFKLTVGQMCNRNPRTISS 296

Query: 325  DAMAVEAMEKMESPPSPVQFLPVVNHQNVVIGIVTLHGLVSAGL 194
            + MAV+AM +ME+PPSPVQFLPV++ QNV+IGIVTLHGLVSAGL
Sbjct: 297  NVMAVDAMRRMEAPPSPVQFLPVLDDQNVLIGIVTLHGLVSAGL 340


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