BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00016648
         (2163 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002278999.1| PREDICTED: pentatricopeptide repeat-containi...   617   e-174
emb|CAN63553.1| hypothetical protein VITISV_003195 [Vitis vinifera]   610   e-172
ref|XP_003552628.1| PREDICTED: pentatricopeptide repeat-containi...   551   e-154
ref|XP_004141599.1| PREDICTED: pentatricopeptide repeat-containi...   546   e-153
ref|XP_004156231.1| PREDICTED: pentatricopeptide repeat-containi...   543   e-152

>ref|XP_002278999.1| PREDICTED: pentatricopeptide repeat-containing protein At3g02490,
            mitochondrial-like [Vitis vinifera]
          Length = 650

 Score =  617 bits (1590), Expect = e-174
 Identities = 317/587 (54%), Positives = 417/587 (71%), Gaps = 6/587 (1%)
 Frame = +1

Query: 208  DFRNPRFRSFSSESALEPNNELDHVALTDILSKSSTNDEIKTGLESIDLPISHEMVLNTL 387
            +F  PR RSFSS+ ALE    LDHV  TDI SK    DEIK  +ES D+ +SHE+VL  L
Sbjct: 61   NFSGPRSRSFSSDLALEDKG-LDHVVFTDIFSKPKGFDEIKNEVESSDIVVSHELVLKVL 119

Query: 388  SILEGNPEIAWKFFGFVSETENARLSSKSYNLMLAILGRKDYVEQFWGLTKVMQKKGYRV 567
              LE NPE+A   F +V   E+ RLSSKSYNLML ILG   +V +FW L +VM+KKGY V
Sbjct: 120  ENLESNPEVARSVFDWVLRAESERLSSKSYNLMLGILGSNGFVSEFWDLVEVMKKKGYGV 179

Query: 568  SKKTYIKASENFEKEGMVNDLDKLKELYASKP------NVFPRVTKVIGENEWDEVVQQK 729
            SK  Y+KA ENFEKE + +DL+KL+ L+AS         +  RV+K+I    W + V+ +
Sbjct: 180  SKAAYVKALENFEKEALGSDLEKLRGLFASGSVDDSIQKICSRVSKIIRSEVWGDNVEGQ 239

Query: 730  LRDLNCSWSNDLVALVIEHLKVYPMKALMFFWWVEENPSFKHDKRSYTSMLNVLSREDSI 909
            L +L  ++S DLVA+V+E+L + PMKAL+FF WVEE+   KHDK++Y +ML VL RED I
Sbjct: 240  LHNLKVTFSGDLVAMVLENLGLEPMKALIFFRWVEESDLVKHDKQTYNAMLRVLGREDCI 299

Query: 910  DKFWRIFNEMKEAGYQMDMETYVFVIERFYKRRMIKDVVDLYEYMMAGATKPSCRDSVFL 1089
            ++FW++ +EM+ AGY+M++ TY  V+ RFYKR+MIK+VVDLYE+ M+GA KPS  D  FL
Sbjct: 300  ERFWKVADEMRNAGYEMEVATYFKVVGRFYKRKMIKEVVDLYEFAMSGANKPSMYDCTFL 359

Query: 1090 LQKIVVSKEDLDMELFSRVVKIFTDGGYILTDSMLYSVAKSLTSVARLQECGKILKAMEK 1269
            L+KIVVSK  LD+ LFSRVV+ +T+GG ILT SML ++ KSLTSV R  EC K+LKAME+
Sbjct: 360  LRKIVVSKV-LDISLFSRVVRTYTEGGNILTKSMLDAILKSLTSVGRFGECNKLLKAMEE 418

Query: 1270 GGFVPTNEVYDKIIFQLGRIGKSDEAIEMIGEMEASGCNPDFKTWSSLIHGQCLASDVVK 1449
            GG+V  + + +KI F L    K+DEA E +  ME S C P+++TWSSLI G C+A D+ K
Sbjct: 419  GGYVVGSGMQNKIAFGLSSARKTDEANEFMNNMEDSDCRPNYRTWSSLIEGYCVAGDLDK 478

Query: 1450 ASSSFRSMVGKFGDEDAGYIFDLLITGFCQKKKAEDASKFLSEMVDGTKLRPWHKTYKTL 1629
            AS  F+ MV K G   AGY F++L+  +C K ++ DA   L ++    K +PWH TYK L
Sbjct: 479  ASDCFQKMVEKEGVSYAGYAFEVLVNAYCCKGRSVDACGLLCDLASKEKFKPWHSTYKLL 538

Query: 1630 IGKLLVRGSFSEALSLLKPMKGNGYPPNLDPFIGYISKSGTGTDAMRFLRAVTDRKFPST 1809
            I KLLV+G F  AL+LL  MK + +PP LDPFI Y+S++GTG DA+ FLRA+T ++FPST
Sbjct: 539  ISKLLVQGGFQAALNLLGLMKDHEFPPFLDPFIEYVSRTGTGDDAITFLRAMTVKRFPST 598

Query: 1810 SIFIRMFEAFFKAGRHSEAHNFMSECPNYIRSDADVLNLFSAQKPEE 1950
            S+F++ FEAFFKAGRH+EA +F+S+CP YIR+ ADVLNLF   K  E
Sbjct: 599  SVFLQTFEAFFKAGRHNEAQDFLSKCPGYIRNHADVLNLFYTMKSGE 645


>emb|CAN63553.1| hypothetical protein VITISV_003195 [Vitis vinifera]
          Length = 650

 Score =  610 bits (1572), Expect = e-172
 Identities = 315/587 (53%), Positives = 413/587 (70%), Gaps = 6/587 (1%)
 Frame = +1

Query: 208  DFRNPRFRSFSSESALEPNNELDHVALTDILSKSSTNDEIKTGLESIDLPISHEMVLNTL 387
            +F  PR RSFSS+ ALE    LDHV  TDI SK    DEIK  +ES D+ +SHE+VL  L
Sbjct: 61   NFSGPRSRSFSSDLALEDKG-LDHVVFTDIFSKPKGFDEIKNEVESSDIVVSHELVLKVL 119

Query: 388  SILEGNPEIAWKFFGFVSETENARLSSKSYNLMLAILGRKDYVEQFWGLTKVMQKKGYRV 567
              LE NPE+A   F +V   E+ RLSSKSYNLML ILG   +V +FW L +VM+KKGY V
Sbjct: 120  ENLESNPEVARXVFDWVLRAESERLSSKSYNLMLGILGSNGFVSEFWDLVEVMKKKGYGV 179

Query: 568  SKKTYIKASENFEKEGMVNDLDKLKELYASKP------NVFPRVTKVIGENEWDEVVQQK 729
            SK  Y+KA ENFEKE + +DL+KL+ L+AS         +  RV+K+I    W + V+ +
Sbjct: 180  SKAAYVKALENFEKEALGSDLEKLRGLFASGSVDNSIQKICSRVSKIIRSEVWGDNVEGQ 239

Query: 730  LRDLNCSWSNDLVALVIEHLKVYPMKALMFFWWVEENPSFKHDKRSYTSMLNVLSREDSI 909
            L +L  ++S DLVA+V+E+L + PMKAL+FF WVEE+   KHDK +Y +ML VL RED I
Sbjct: 240  LHNLKVTFSGDLVAMVLENLGLEPMKALIFFRWVEESDLXKHDKXTYNAMLRVLGREDCI 299

Query: 910  DKFWRIFNEMKEAGYQMDMETYVFVIERFYKRRMIKDVVDLYEYMMAGATKPSCRDSVFL 1089
            ++FW++ +EM+ AGY+M++ TY  V+ RFYKR+MI +VVDLYE+ M+GA KPS  D  FL
Sbjct: 300  ERFWKVADEMRNAGYEMEVATYXKVVGRFYKRKMIXEVVDLYEFAMSGANKPSMYDCTFL 359

Query: 1090 LQKIVVSKEDLDMELFSRVVKIFTDGGYILTDSMLYSVAKSLTSVARLQECGKILKAMEK 1269
            L+KIVVSK  LD+ LFSRVV+ +T+GG ILT SML +  KSLTSV R  EC K+LKAME+
Sbjct: 360  LRKIVVSKV-LDISLFSRVVRTYTEGGNILTKSMLDAXLKSLTSVGRFGECNKLLKAMEE 418

Query: 1270 GGFVPTNEVYDKIIFQLGRIGKSDEAIEMIGEMEASGCNPDFKTWSSLIHGQCLASDVVK 1449
            GG+V  + + +KI F L    K+DEA E +  ME S C P+++TWSSLI G C+A D+ K
Sbjct: 419  GGYVVGSGMQNKIAFGLSSARKTDEANEFMNNMEDSDCRPNYRTWSSLIEGYCVAGDLDK 478

Query: 1450 ASSSFRSMVGKFGDEDAGYIFDLLITGFCQKKKAEDASKFLSEMVDGTKLRPWHKTYKTL 1629
            AS  F+ MV K G    GY F++L+  +C K ++ DA   L ++    K +PWH TYK L
Sbjct: 479  ASDCFQKMVEKEGVSYXGYAFEVLVNAYCCKGRSVDACGLLCDLASKEKFKPWHSTYKLL 538

Query: 1630 IGKLLVRGSFSEALSLLKPMKGNGYPPNLDPFIGYISKSGTGTDAMRFLRAVTDRKFPST 1809
            I KLLV+G F  AL+LL  MK + +PP LDPFI Y+S++GTG DA+ FLRA+T ++FPST
Sbjct: 539  ISKLLVQGGFQAALNLLGLMKDHEFPPFLDPFIEYVSRTGTGDDAITFLRAMTVKRFPST 598

Query: 1810 SIFIRMFEAFFKAGRHSEAHNFMSECPNYIRSDADVLNLFSAQKPEE 1950
            S+F++ FEAFFKAGRH+EA +F+S+CP YIR+ ADVLNLF   K  E
Sbjct: 599  SVFLQTFEAFFKAGRHNEAQDFLSKCPGYIRNHADVLNLFYTMKSGE 645


>ref|XP_003552628.1| PREDICTED: pentatricopeptide repeat-containing protein At3g02490,
            mitochondrial-like [Glycine max]
          Length = 629

 Score =  551 bits (1419), Expect = e-154
 Identities = 289/596 (48%), Positives = 400/596 (67%), Gaps = 2/596 (0%)
 Frame = +1

Query: 169  YLSSFIGRNAFGSDFR-NPRFRSFSSESALEPNNELDHVALTDILSKSSTNDEIKTGLES 345
            Y SS   R A  S F  NP FR FSSE  L    + DH+ + DI SK   +++ KT L S
Sbjct: 27   YSSSIPRRFAANSTFPLNPSFRRFSSEPVLA-QADTDHLLVADIFSKPVDSEDFKTLLGS 85

Query: 346  IDLPISHEMVLNTLSILEGNPEIAWKFFGFVSETENARLSSKSYNLMLAILGRKDYVEQF 525
              + I+H+ VL  L   + N + A +FF +VSE    RLSSK YN ML +LG   +V++F
Sbjct: 86   NRVSITHDAVLAVLGKFDSNVDAARRFFQWVSENHPERLSSKCYNSMLCVLGTNGFVDEF 145

Query: 526  WGLTKVMQKKGYRVSKKTYIKASENFEKEGMVNDLDKLKELYA-SKPNVFPRVTKVIGEN 702
            W L  VM+KKGY VSK    +  E+FEK GM  D+ KLK L+  SK      V +++  N
Sbjct: 146  WDLVNVMKKKGYGVSKGVKERVLESFEKGGMDGDVAKLKGLFDNSKEKNIAIVCRIVRNN 205

Query: 703  EWDEVVQQKLRDLNCSWSNDLVALVIEHLKVYPMKALMFFWWVEENPSFKHDKRSYTSML 882
             W + V++++ DLN  +S+++V  V+E L + P+KAL+FF W+EE+  FKHD R+Y +M 
Sbjct: 206  VWGDDVEKQIEDLNVGFSSEVVKTVLESLVLEPVKALIFFRWLEESGLFKHDGRTYNAMA 265

Query: 883  NVLSREDSIDKFWRIFNEMKEAGYQMDMETYVFVIERFYKRRMIKDVVDLYEYMMAGATK 1062
             VL RED ID+FW++  +M+ AG++M+ ET+V V+ RF KRRM+KD V+LYE+ MAGA K
Sbjct: 266  RVLGREDLIDRFWKLVGDMRSAGFEMEAETFVKVLGRFCKRRMVKDAVELYEFAMAGANK 325

Query: 1063 PSCRDSVFLLQKIVVSKEDLDMELFSRVVKIFTDGGYILTDSMLYSVAKSLTSVARLQEC 1242
            P+ +  VFLL+K+   KE LD +LFSRV+K+FT  G +LTDS+  +V KSLTSV R  E 
Sbjct: 326  PTVQCCVFLLRKVAAGKE-LDTDLFSRVLKVFTGNGNVLTDSVANAVLKSLTSVGRTGEW 384

Query: 1243 GKILKAMEKGGFVPTNEVYDKIIFQLGRIGKSDEAIEMIGEMEASGCNPDFKTWSSLIHG 1422
             K+LK ME  GFV    +  KI ++LG  G  ++A E +  +E SG NP  KTW SLI G
Sbjct: 385  NKVLKEMEDCGFVAGGSLQSKIAYRLGAAGNKEQAHEFMNRIEVSGSNPYRKTWESLIQG 444

Query: 1423 QCLASDVVKASSSFRSMVGKFGDEDAGYIFDLLITGFCQKKKAEDASKFLSEMVDGTKLR 1602
             C+A ++ KA  SF+ +V K G   AGY F++L+  +CQ  +A DASK L  +V+  +L+
Sbjct: 445  YCVAGNLDKAFESFKEIVEKEGVASAGYSFNVLMNSYCQMNRAVDASKILCRLVNEKQLK 504

Query: 1603 PWHKTYKTLIGKLLVRGSFSEALSLLKPMKGNGYPPNLDPFIGYISKSGTGTDAMRFLRA 1782
            PWH TYK L+ KLLV+G F++AL++L  M+ +G+PP  DPFI ++SKSG+G DA+ FL+A
Sbjct: 505  PWHSTYKLLVTKLLVQGGFTDALNILGLMRTHGFPPFTDPFIEHLSKSGSGDDAVLFLKA 564

Query: 1783 VTDRKFPSTSIFIRMFEAFFKAGRHSEAHNFMSECPNYIRSDADVLNLFSAQKPEE 1950
            +T ++FPSTS+F+RMFEAFFK  RH EA NF+S+CP YIR+ ADVLNLF +   +E
Sbjct: 565  MTSKRFPSTSMFLRMFEAFFKHRRHEEAQNFLSKCPRYIRNHADVLNLFCSLNSKE 620


>ref|XP_004141599.1| PREDICTED: pentatricopeptide repeat-containing protein At3g02490,
            mitochondrial-like [Cucumis sativus]
          Length = 656

 Score =  546 bits (1407), Expect = e-153
 Identities = 276/580 (47%), Positives = 397/580 (68%), Gaps = 6/580 (1%)
 Frame = +1

Query: 229  RSFSSESALEPNNELDHVALTDILSKSSTNDEIKTGLESIDLPISHEMVLNTLSILEGNP 408
            R+FSSE A E   E DH  + DILSKS   DEI+ GLES  + ISH++VL  L  LE NP
Sbjct: 71   RTFSSEPAAE--QESDHAVIVDILSKSRDVDEIRKGLESNGVVISHDLVLEVLGQLESNP 128

Query: 409  EIAWKFFGFVSETENARLSSKSYNLMLAILGRKDYVEQFWGLTKVMQKKGYRVSKKTYIK 588
            + A +FF +VS     +LSSKS+NLML ILG    V++FW L   M+KKGY +SK    K
Sbjct: 129  DDAIRFFDWVSGDYGEKLSSKSFNLMLGILGVNGLVKKFWDLNCDMKKKGYGMSKTVRDK 188

Query: 589  ASENFEKEGMVNDLDKLKELYAS------KPNVFPRVTKVIGENEWDEVVQQKLRDLNCS 750
              E F+K+G+ ++ +KL++++AS        N+   V+++I  N W E V+Q+LRD++ S
Sbjct: 189  VLEKFDKDGLKSEAEKLRDMFASGSTDKSPDNIGSNVSRLIRTNLWGEDVEQQLRDMSVS 248

Query: 751  WSNDLVALVIEHLKVYPMKALMFFWWVEENPSFKHDKRSYTSMLNVLSREDSIDKFWRIF 930
            +S+D+V +++E L   P KA +FF W++E+  FKHD+++Y +M  VL RED ID+FW++ 
Sbjct: 249  FSSDMVKMILEDLSTDPAKAYIFFLWIDESGMFKHDEQTYNAMATVLGREDCIDRFWKVV 308

Query: 931  NEMKEAGYQMDMETYVFVIERFYKRRMIKDVVDLYEYMMAGATKPSCRDSVFLLQKIVVS 1110
            +EM+  GY+M+MET+  V+ RF KRRMI++ V+LY + M+   KPS     FLL+KI VS
Sbjct: 309  DEMRSQGYKMEMETFTKVLGRFCKRRMIEEAVNLYVFAMSVGDKPSEDCLTFLLKKIAVS 368

Query: 1111 KEDLDMELFSRVVKIFTDGGYILTDSMLYSVAKSLTSVARLQECGKILKAMEKGGFVPTN 1290
             E  D++LFSR +KIF++ G +L DSM+++V +SL+SV R  E  ++L  M++ G+V + 
Sbjct: 369  -EQFDLDLFSRALKIFSESGNVLKDSMVFAVLRSLSSVGRTGEFNEVLNVMKEYGYVCSG 427

Query: 1291 EVYDKIIFQLGRIGKSDEAIEMIGEMEASGCNPDFKTWSSLIHGQCLASDVVKASSSFRS 1470
             +  K+ ++L R GKSDEA + +  +EASGCNPD KTW+SLI G C A D+ KAS     
Sbjct: 428  GLKRKVAYRLSRTGKSDEANDFMNNLEASGCNPDNKTWASLIEGHCAAGDLDKASDCIHK 487

Query: 1471 MVGKFGDEDAGYIFDLLITGFCQKKKAEDASKFLSEMVDGTKLRPWHKTYKTLIGKLLVR 1650
            MV K G   A Y  DL++ G+CQKK   DAS  L ++VD ++L+P H TYKTLI KLL+ 
Sbjct: 488  MVEKGGVPSAAYALDLIVNGYCQKKHETDASHLLFDLVDKSQLKPRHSTYKTLINKLLLC 547

Query: 1651 GSFSEALSLLKPMKGNGYPPNLDPFIGYISKSGTGTDAMRFLRAVTDRKFPSTSIFIRMF 1830
            G F +AL LL  M+ + +PP ++PFI Y+SKSGT  D + FL+ +T +KFPST++ +++F
Sbjct: 548  GEFKDALKLLGMMRNHEFPPFIEPFISYVSKSGTADDGLEFLKGMTSKKFPSTTVVLQLF 607

Query: 1831 EAFFKAGRHSEAHNFMSECPNYIRSDADVLNLFSAQKPEE 1950
            EAFF+AGRH +A + + +CP YIR+ ADVL+LF + KP E
Sbjct: 608  EAFFQAGRHGDAQDLLLKCPGYIRNHADVLDLFCSMKPVE 647


>ref|XP_004156231.1| PREDICTED: pentatricopeptide repeat-containing protein At3g02490,
            mitochondrial-like [Cucumis sativus]
          Length = 656

 Score =  543 bits (1400), Expect = e-152
 Identities = 275/580 (47%), Positives = 396/580 (68%), Gaps = 6/580 (1%)
 Frame = +1

Query: 229  RSFSSESALEPNNELDHVALTDILSKSSTNDEIKTGLESIDLPISHEMVLNTLSILEGNP 408
            R+FSSE A     E DH  + DILSKS   DEI+ GLES  + ISH++VL  L  LE NP
Sbjct: 71   RTFSSEPAAV--QESDHAVIVDILSKSRDVDEIRKGLESNGVVISHDLVLEVLGQLESNP 128

Query: 409  EIAWKFFGFVSETENARLSSKSYNLMLAILGRKDYVEQFWGLTKVMQKKGYRVSKKTYIK 588
            + A +FF +VS     +LSSKS+NLML ILG    V++FW L   M+KKGY +SK    K
Sbjct: 129  DDAIRFFDWVSGDYGEKLSSKSFNLMLGILGVNGLVKKFWDLNCDMKKKGYGMSKTVRDK 188

Query: 589  ASENFEKEGMVNDLDKLKELYAS------KPNVFPRVTKVIGENEWDEVVQQKLRDLNCS 750
              E F+K+G+ ++ +KL++++AS        N+   V+++I  N W E V+Q+LRD++ S
Sbjct: 189  VLEKFDKDGLKSEAEKLRDMFASGSTDKSPDNIGSNVSRLIRTNLWGEDVEQQLRDMSVS 248

Query: 751  WSNDLVALVIEHLKVYPMKALMFFWWVEENPSFKHDKRSYTSMLNVLSREDSIDKFWRIF 930
            +S+D+V +++E L   P KA +FF W++E+  FKHD+++Y +M  VL RED ID+FW++ 
Sbjct: 249  FSSDMVKMILEDLSTDPAKAYIFFLWIDESGMFKHDEQTYNAMATVLGREDCIDRFWKVV 308

Query: 931  NEMKEAGYQMDMETYVFVIERFYKRRMIKDVVDLYEYMMAGATKPSCRDSVFLLQKIVVS 1110
            +EM+  GY+M+MET+  V+ RF KRRMI++ V+LY + M+   KPS     FLL+KI VS
Sbjct: 309  DEMRSQGYKMEMETFTKVLGRFCKRRMIEEAVNLYVFAMSVGDKPSEDCLTFLLKKIAVS 368

Query: 1111 KEDLDMELFSRVVKIFTDGGYILTDSMLYSVAKSLTSVARLQECGKILKAMEKGGFVPTN 1290
             E  D++LFSR +KIF++ G +L DSM+++V +SL+SV R  E  ++L  M++ G+V + 
Sbjct: 369  -EQFDLDLFSRALKIFSESGNVLKDSMVFAVLRSLSSVGRTGEFNEVLNVMKEYGYVCSG 427

Query: 1291 EVYDKIIFQLGRIGKSDEAIEMIGEMEASGCNPDFKTWSSLIHGQCLASDVVKASSSFRS 1470
             +  K+ ++L R GKSDEA + +  +EASGCNPD KTW+SLI G C A D+ KAS     
Sbjct: 428  GLKRKVAYRLSRTGKSDEANDFMNNLEASGCNPDNKTWASLIEGHCAAGDLDKASDCIHK 487

Query: 1471 MVGKFGDEDAGYIFDLLITGFCQKKKAEDASKFLSEMVDGTKLRPWHKTYKTLIGKLLVR 1650
            MV K G   A Y  DL++ G+CQKK   DAS  L ++VD ++L+P H TYKTLI KLL+ 
Sbjct: 488  MVEKGGVPSAAYALDLIVNGYCQKKHETDASHLLFDLVDKSQLKPRHSTYKTLINKLLLC 547

Query: 1651 GSFSEALSLLKPMKGNGYPPNLDPFIGYISKSGTGTDAMRFLRAVTDRKFPSTSIFIRMF 1830
            G F +AL LL  M+ + +PP ++PFI Y+SKSGT  D + FL+ +T +KFPST++ +++F
Sbjct: 548  GEFKDALKLLGMMRNHEFPPFIEPFISYVSKSGTADDGLEFLKGMTSKKFPSTTVVLQLF 607

Query: 1831 EAFFKAGRHSEAHNFMSECPNYIRSDADVLNLFSAQKPEE 1950
            EAFF+AGRH +A + + +CP YIR+ ADVL+LF + KP E
Sbjct: 608  EAFFQAGRHGDAQDLLLKCPGYIRNHADVLDLFCSMKPVE 647