BLASTX nr result

ID: Cimicifuga21_contig00016636 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00016636
         (475 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002332139.1| predicted protein [Populus trichocarpa] gi|2...    72   4e-11
gb|ABK95033.1| unknown [Populus trichocarpa]                           72   4e-11
ref|XP_004145449.1| PREDICTED: protein PHLOEM PROTEIN 2-LIKE A1-...    66   3e-09
ref|XP_003607876.1| F-box protein PP2-B10 [Medicago truncatula] ...    64   1e-08
gb|AFK41435.1| unknown [Lotus japonicus]                               62   4e-08

>ref|XP_002332139.1| predicted protein [Populus trichocarpa] gi|222875189|gb|EEF12320.1|
           predicted protein [Populus trichocarpa]
          Length = 280

 Score = 72.4 bits (176), Expect = 4e-11
 Identities = 37/90 (41%), Positives = 56/90 (62%), Gaps = 11/90 (12%)
 Frame = -2

Query: 237 SKNKVTKPKNMKGTSES---ILKTPKTTDVR--------AEPKLKLPHNYENIVKDVDLP 91
           +K   TK K ++   E+   +++  K  DV+           ++KLPHN E I++D D P
Sbjct: 35  AKQSETKLKTVEKAPEAKPLVIRQEKAADVKPLHDAKAKTVKEVKLPHNCEAILRDADSP 94

Query: 90  IKFSSIEDLYDQLHSGVFLNEKRQKYWIEK 1
           +  SS++ LYDQL +GVFLN+KR+KYW+EK
Sbjct: 95  VDRSSVDKLYDQLSTGVFLNQKRKKYWVEK 124


>gb|ABK95033.1| unknown [Populus trichocarpa]
          Length = 280

 Score = 72.4 bits (176), Expect = 4e-11
 Identities = 37/90 (41%), Positives = 56/90 (62%), Gaps = 11/90 (12%)
 Frame = -2

Query: 237 SKNKVTKPKNMKGTSES---ILKTPKTTDVR--------AEPKLKLPHNYENIVKDVDLP 91
           +K   TK K ++   E+   +++  K  DV+           ++KLPHN E I++D D P
Sbjct: 35  AKQSETKLKTVEKAPEAKPLVIRQEKAADVKPLHDAKAKTVKEVKLPHNCEAILRDADSP 94

Query: 90  IKFSSIEDLYDQLHSGVFLNEKRQKYWIEK 1
           +  SS++ LYDQL +GVFLN+KR+KYW+EK
Sbjct: 95  VDRSSVDKLYDQLSTGVFLNQKRKKYWVEK 124


>ref|XP_004145449.1| PREDICTED: protein PHLOEM PROTEIN 2-LIKE A1-like [Cucumis sativus]
          Length = 257

 Score = 66.2 bits (160), Expect = 3e-09
 Identities = 32/95 (33%), Positives = 60/95 (63%), Gaps = 4/95 (4%)
 Frame = -2

Query: 273 KEKNKEDMGQASSKNKVTKPKNMKG--TSESILKTPKTTDVRAE--PKLKLPHNYENIVK 106
           +E+  +   Q ++ N   +    +G  +S + LK  K  +V+ +   ++K+ H  E+I+K
Sbjct: 7   EEQAAQPQPQPAAANAAVRSNKHRGGNSSNNNLKEEKEKEVKGKLGEEMKVGHGIEDILK 66

Query: 105 DVDLPIKFSSIEDLYDQLHSGVFLNEKRQKYWIEK 1
           D DLP+  SS++ LY+QL+ G+FLN++ +KYW++K
Sbjct: 67  DADLPVDRSSLDKLYEQLYVGIFLNKRTKKYWLDK 101


>ref|XP_003607876.1| F-box protein PP2-B10 [Medicago truncatula]
           gi|355508931|gb|AES90073.1| F-box protein PP2-B10
           [Medicago truncatula] gi|388501714|gb|AFK38923.1|
           unknown [Medicago truncatula]
          Length = 293

 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 36/99 (36%), Positives = 53/99 (53%), Gaps = 11/99 (11%)
 Frame = -2

Query: 264 NKEDMGQASSKNKVT--------KPKNMKGTSESILKTPKTTDVRAEPKLK---LPHNYE 118
           NKE++   S +  +          P + K    S +     T    +P +K   L HNYE
Sbjct: 37  NKEELRLPSRRENLLLSPQYHTKSPSSKKAVQNSTVVKCDETQSATKPLIKELSLSHNYE 96

Query: 117 NIVKDVDLPIKFSSIEDLYDQLHSGVFLNEKRQKYWIEK 1
           +I+KD D P+  SS E + DQL++GVFL+ K +KYW+EK
Sbjct: 97  HILKDADSPVDKSSREKMCDQLYAGVFLHHKTKKYWVEK 135


>gb|AFK41435.1| unknown [Lotus japonicus]
          Length = 314

 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 28/53 (52%), Positives = 38/53 (71%)
 Frame = -2

Query: 159 VRAEPKLKLPHNYENIVKDVDLPIKFSSIEDLYDQLHSGVFLNEKRQKYWIEK 1
           V+   +L  PHNYE+I+K  D PI  SS E L DQL++GVFL+ K +KYW+E+
Sbjct: 106 VKPRKELNFPHNYEHILKGADSPIDKSSREKLCDQLYAGVFLDHKTKKYWLER 158


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