BLASTX nr result

ID: Cimicifuga21_contig00016617 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00016617
         (981 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004135609.1| PREDICTED: SOSS complex subunit B homolog [C...   187   3e-45
ref|XP_002520709.1| conserved hypothetical protein [Ricinus comm...   184   2e-44
emb|CBI32286.3| unnamed protein product [Vitis vinifera]              184   4e-44
emb|CAN67844.1| hypothetical protein VITISV_016667 [Vitis vinifera]   184   4e-44
ref|XP_002270604.1| PREDICTED: SOSS complex subunit B homolog [V...   182   8e-44

>ref|XP_004135609.1| PREDICTED: SOSS complex subunit B homolog [Cucumis sativus]
           gi|449485696|ref|XP_004157248.1| PREDICTED: SOSS complex
           subunit B homolog [Cucumis sativus]
          Length = 139

 Score =  187 bits (475), Expect = 3e-45
 Identities = 92/131 (70%), Positives = 106/131 (80%)
 Frame = -2

Query: 395 MVPLKDIVPAALNTINTQFILLEKAIPSKEGREKTCLALVADETASVHFQLWGDECDVFE 216
           M+PLKD+VPAA N +NTQFI+LEK + + EG+ K C +LVADETA+VHFQLWGDECDV E
Sbjct: 2   MIPLKDLVPAAQNKVNTQFIVLEKGMTTMEGQNKVCQSLVADETAAVHFQLWGDECDVVE 61

Query: 215 PGDIIRLTNGIFSYDGKNFNKSFVLRAGKRGKAEKVGEFTMTFVEMPNLSEIHWVTDPSN 36
           P DIIRLTNGIFSY   + N + VLRAGKRGK EKVGEF M FVE PN+SEIHWV D  N
Sbjct: 62  PSDIIRLTNGIFSY---SRNNNLVLRAGKRGKIEKVGEFKMVFVETPNMSEIHWVPDTIN 118

Query: 35  SKKQVQEAVLS 3
           S K V+E+VLS
Sbjct: 119 SNKYVKESVLS 129


>ref|XP_002520709.1| conserved hypothetical protein [Ricinus communis]
           gi|223540094|gb|EEF41671.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 145

 Score =  184 bits (468), Expect = 2e-44
 Identities = 93/131 (70%), Positives = 103/131 (78%)
 Frame = -2

Query: 395 MVPLKDIVPAALNTINTQFILLEKAIPSKEGREKTCLALVADETASVHFQLWGDECDVFE 216
           M  LKDIVP+A   INTQ ILL+K   + EG+ KTCLAL ADETA+VHFQLWG+ECD FE
Sbjct: 9   MTYLKDIVPSAQTNINTQLILLDKGRITMEGQNKTCLALAADETAAVHFQLWGEECDAFE 68

Query: 215 PGDIIRLTNGIFSYDGKNFNKSFVLRAGKRGKAEKVGEFTMTFVEMPNLSEIHWVTDPSN 36
           PGDIIRL NGIFSY+  N     VLRAGKRG  EKVGEFTM FVE PN+SEI WV DP+N
Sbjct: 69  PGDIIRLANGIFSYNRNN----LVLRAGKRGSIEKVGEFTMAFVETPNMSEIRWVPDPNN 124

Query: 35  SKKQVQEAVLS 3
           SKK VQEAV+S
Sbjct: 125 SKKYVQEAVIS 135


>emb|CBI32286.3| unnamed protein product [Vitis vinifera]
          Length = 155

 Score =  184 bits (466), Expect = 4e-44
 Identities = 91/133 (68%), Positives = 106/133 (79%)
 Frame = -2

Query: 401 ARMVPLKDIVPAALNTINTQFILLEKAIPSKEGREKTCLALVADETASVHFQLWGDECDV 222
           A M+ LKD+VPAA N INTQFI+L+K   + EG+ KTCL LVADETA+VHFQ+WGDECD 
Sbjct: 17  ATMLSLKDMVPAAQNNINTQFIILDKGKMTLEGKYKTCLTLVADETAAVHFQMWGDECDA 76

Query: 221 FEPGDIIRLTNGIFSYDGKNFNKSFVLRAGKRGKAEKVGEFTMTFVEMPNLSEIHWVTDP 42
           FE GDIIRL +GIFSY+  N     VLRAGK+GKAEKVGEF M FVE PN+SEI W+ DP
Sbjct: 77  FEGGDIIRLVDGIFSYNRNN----LVLRAGKKGKAEKVGEFCMAFVETPNMSEIRWIPDP 132

Query: 41  SNSKKQVQEAVLS 3
           SN KK VQ+AV+S
Sbjct: 133 SNPKKYVQDAVIS 145


>emb|CAN67844.1| hypothetical protein VITISV_016667 [Vitis vinifera]
          Length = 223

 Score =  184 bits (466), Expect = 4e-44
 Identities = 91/133 (68%), Positives = 106/133 (79%)
 Frame = -2

Query: 401 ARMVPLKDIVPAALNTINTQFILLEKAIPSKEGREKTCLALVADETASVHFQLWGDECDV 222
           A M+ LKD+VPAA N INTQFI+L+K   + EG+ KTCL LVADETA+VHFQ+WGDECD 
Sbjct: 85  ATMLSLKDMVPAAQNNINTQFIILDKGKMTLEGKYKTCLTLVADETAAVHFQMWGDECDA 144

Query: 221 FEPGDIIRLTNGIFSYDGKNFNKSFVLRAGKRGKAEKVGEFTMTFVEMPNLSEIHWVTDP 42
           FE GDIIRL +GIFSY+  N     VLRAGK+GKAEKVGEF M FVE PN+SEI W+ DP
Sbjct: 145 FEGGDIIRLVDGIFSYNRNN----LVLRAGKKGKAEKVGEFCMAFVETPNMSEIRWIPDP 200

Query: 41  SNSKKQVQEAVLS 3
           SN KK VQ+AV+S
Sbjct: 201 SNPKKYVQDAVIS 213


>ref|XP_002270604.1| PREDICTED: SOSS complex subunit B homolog [Vitis vinifera]
          Length = 137

 Score =  182 bits (463), Expect = 8e-44
 Identities = 90/131 (68%), Positives = 105/131 (80%)
 Frame = -2

Query: 395 MVPLKDIVPAALNTINTQFILLEKAIPSKEGREKTCLALVADETASVHFQLWGDECDVFE 216
           M+ LKD+VPAA N INTQFI+L+K   + EG+ KTCL LVADETA+VHFQ+WGDECD FE
Sbjct: 1   MLSLKDMVPAAQNNINTQFIILDKGKMTLEGKYKTCLTLVADETAAVHFQMWGDECDAFE 60

Query: 215 PGDIIRLTNGIFSYDGKNFNKSFVLRAGKRGKAEKVGEFTMTFVEMPNLSEIHWVTDPSN 36
            GDIIRL +GIFSY+  N     VLRAGK+GKAEKVGEF M FVE PN+SEI W+ DPSN
Sbjct: 61  GGDIIRLVDGIFSYNRNN----LVLRAGKKGKAEKVGEFCMAFVETPNMSEIRWIPDPSN 116

Query: 35  SKKQVQEAVLS 3
            KK VQ+AV+S
Sbjct: 117 PKKYVQDAVIS 127


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