BLASTX nr result

ID: Cimicifuga21_contig00016616 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00016616
         (797 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002512625.1| conserved hypothetical protein [Ricinus comm...   143   5e-32
ref|NP_001236622.1| uncharacterized protein LOC100306040 precurs...   140   2e-31
ref|XP_002325900.1| predicted protein [Populus trichocarpa] gi|2...   137   3e-30
ref|NP_564848.1| uncharacterized protein [Arabidopsis thaliana] ...   136   5e-30
gb|AAK93583.2| unknown protein [Arabidopsis thaliana]                 136   5e-30

>ref|XP_002512625.1| conserved hypothetical protein [Ricinus communis]
           gi|223548586|gb|EEF50077.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 119

 Score =  143 bits (360), Expect = 5e-32
 Identities = 56/100 (56%), Positives = 76/100 (76%)
 Frame = -2

Query: 529 LLTLTASIQNARLVHGVVDNEALVPLIEPKMMMESMVLINDTRRKLGGFQICALCTCCGG 350
           +++ + +  N    +G   +  +VPL+EP+  ++  +++N++RR+LG FQICALCTCCGG
Sbjct: 20  VISYSETSTNVAQANGSAISNEMVPLMEPEKAVKMRLMVNESRRRLGSFQICALCTCCGG 79

Query: 349 PKGICLPSPCCYGFNCNIPNRPFGLCALTPKTCNCFDCHL 230
            KG+CLPSPCCY  NCNIPNRPFG C+ TPKTCNCF CHL
Sbjct: 80  AKGLCLPSPCCYAINCNIPNRPFGFCSFTPKTCNCFGCHL 119


>ref|NP_001236622.1| uncharacterized protein LOC100306040 precursor [Glycine max]
           gi|356531910|ref|XP_003534519.1| PREDICTED:
           uncharacterized protein LOC100787156 [Glycine max]
           gi|255627359|gb|ACU14024.1| unknown [Glycine max]
          Length = 109

 Score =  140 bits (354), Expect = 2e-31
 Identities = 61/100 (61%), Positives = 75/100 (75%)
 Frame = -2

Query: 529 LLTLTASIQNARLVHGVVDNEALVPLIEPKMMMESMVLINDTRRKLGGFQICALCTCCGG 350
           L+ ++     A LVH    +  +VPL+E   M E M+++N++RRKLG FQICALCTCCGG
Sbjct: 11  LIFVSILANEASLVHEANGSFPMVPLVEAGKM-EMMMVMNESRRKLGSFQICALCTCCGG 69

Query: 349 PKGICLPSPCCYGFNCNIPNRPFGLCALTPKTCNCFDCHL 230
            KG+CLPSPCCY  NCNIP+RPFG C+ TPKTCNCF CHL
Sbjct: 70  AKGMCLPSPCCYAINCNIPHRPFGFCSFTPKTCNCFGCHL 109


>ref|XP_002325900.1| predicted protein [Populus trichocarpa] gi|222862775|gb|EEF00282.1|
           predicted protein [Populus trichocarpa]
          Length = 78

 Score =  137 bits (345), Expect = 3e-30
 Identities = 53/78 (67%), Positives = 65/78 (83%)
 Frame = -2

Query: 463 LVPLIEPKMMMESMVLINDTRRKLGGFQICALCTCCGGPKGICLPSPCCYGFNCNIPNRP 284
           +VPL+EP  + +  +++N+TRR+L GFQICA+CTCCGG KG+CLPSPCCY  NCNIPNRP
Sbjct: 1   MVPLMEPLKVTDIRMMMNETRRRLNGFQICAMCTCCGGAKGVCLPSPCCYAINCNIPNRP 60

Query: 283 FGLCALTPKTCNCFDCHL 230
           FG C+ TPKTCNC  CHL
Sbjct: 61  FGFCSFTPKTCNCLRCHL 78


>ref|NP_564848.1| uncharacterized protein [Arabidopsis thaliana]
           gi|24030191|gb|AAN41276.1| unknown protein [Arabidopsis
           thaliana] gi|332196234|gb|AEE34355.1| uncharacterized
           protein [Arabidopsis thaliana]
          Length = 115

 Score =  136 bits (343), Expect = 5e-30
 Identities = 61/103 (59%), Positives = 76/103 (73%), Gaps = 1/103 (0%)
 Frame = -2

Query: 535 LFLLTLTASIQNARLVHGVVDNEAL-VPLIEPKMMMESMVLINDTRRKLGGFQICALCTC 359
           LF + +++S Q   ++    DNE + VPL E K M+     +N+TRRKLG FQIC++CTC
Sbjct: 18  LFSIFISSSHQANEVLPAEGDNEMMMVPLGEEKFMV-----MNETRRKLGSFQICSVCTC 72

Query: 358 CGGPKGICLPSPCCYGFNCNIPNRPFGLCALTPKTCNCFDCHL 230
           CGG KG+CLPSPCCY  NCNIPNRPFG C+ TPKTCNCF CH+
Sbjct: 73  CGGAKGLCLPSPCCYAINCNIPNRPFGYCSFTPKTCNCFGCHI 115


>gb|AAK93583.2| unknown protein [Arabidopsis thaliana]
          Length = 105

 Score =  136 bits (343), Expect = 5e-30
 Identities = 61/103 (59%), Positives = 76/103 (73%), Gaps = 1/103 (0%)
 Frame = -2

Query: 535 LFLLTLTASIQNARLVHGVVDNEAL-VPLIEPKMMMESMVLINDTRRKLGGFQICALCTC 359
           LF + +++S Q   ++    DNE + VPL E K M+     +N+TRRKLG FQIC++CTC
Sbjct: 8   LFSIFISSSHQANEVLPAEGDNEMMMVPLGEEKFMV-----MNETRRKLGSFQICSVCTC 62

Query: 358 CGGPKGICLPSPCCYGFNCNIPNRPFGLCALTPKTCNCFDCHL 230
           CGG KG+CLPSPCCY  NCNIPNRPFG C+ TPKTCNCF CH+
Sbjct: 63  CGGAKGLCLPSPCCYAINCNIPNRPFGYCSFTPKTCNCFGCHI 105


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