BLASTX nr result

ID: Cimicifuga21_contig00016581 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00016581
         (447 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002304799.1| multidrug resistance protein ABC transporter...   108   6e-22
ref|XP_003634753.1| PREDICTED: ABC transporter C family member 3...   106   2e-21
emb|CBI39697.3| unnamed protein product [Vitis vinifera]              106   2e-21
ref|XP_002335344.1| multidrug resistance protein ABC transporter...   106   2e-21
ref|XP_002303920.1| multidrug resistance protein ABC transporter...   105   4e-21

>ref|XP_002304799.1| multidrug resistance protein ABC transporter family [Populus
           trichocarpa] gi|222842231|gb|EEE79778.1| multidrug
           resistance protein ABC transporter family [Populus
           trichocarpa]
          Length = 131

 Score =  108 bits (269), Expect = 6e-22
 Identities = 54/70 (77%), Positives = 63/70 (90%)
 Frame = -2

Query: 446 KHFSDSTVITIAHRITSVLDSDMVVLLDHGLILENDSPSKLLENKSSLFAKLVAEYTVRS 267
           +HFSD TVITIAHRITSVLDSDMV+LL HGLI E DSP++LLENKSS F++LVAEYTVRS
Sbjct: 60  QHFSDCTVITIAHRITSVLDSDMVLLLSHGLIEEYDSPTRLLENKSSSFSQLVAEYTVRS 119

Query: 266 SSSFDNGTGL 237
           ++SF+  TGL
Sbjct: 120 NTSFEKSTGL 129


>ref|XP_003634753.1| PREDICTED: ABC transporter C family member 3-like [Vitis vinifera]
          Length = 1488

 Score =  106 bits (265), Expect = 2e-21
 Identities = 53/66 (80%), Positives = 61/66 (92%)
 Frame = -2

Query: 446  KHFSDSTVITIAHRITSVLDSDMVVLLDHGLILENDSPSKLLENKSSLFAKLVAEYTVRS 267
            +HF DSTVITIAHRITSVLDSDMV+LLDHGL+ E D+P++LLENKSS FAKLVAEYTVRS
Sbjct: 1419 QHFVDSTVITIAHRITSVLDSDMVLLLDHGLVEEYDTPTRLLENKSSSFAKLVAEYTVRS 1478

Query: 266  SSSFDN 249
            +SS +N
Sbjct: 1479 NSSLEN 1484


>emb|CBI39697.3| unnamed protein product [Vitis vinifera]
          Length = 1284

 Score =  106 bits (265), Expect = 2e-21
 Identities = 53/66 (80%), Positives = 61/66 (92%)
 Frame = -2

Query: 446  KHFSDSTVITIAHRITSVLDSDMVVLLDHGLILENDSPSKLLENKSSLFAKLVAEYTVRS 267
            +HF DSTVITIAHRITSVLDSDMV+LLDHGL+ E D+P++LLENKSS FAKLVAEYTVRS
Sbjct: 1215 QHFVDSTVITIAHRITSVLDSDMVLLLDHGLVEEYDTPTRLLENKSSSFAKLVAEYTVRS 1274

Query: 266  SSSFDN 249
            +SS +N
Sbjct: 1275 NSSLEN 1280


>ref|XP_002335344.1| multidrug resistance protein ABC transporter family [Populus
           trichocarpa] gi|222834162|gb|EEE72639.1| multidrug
           resistance protein ABC transporter family [Populus
           trichocarpa]
          Length = 131

 Score =  106 bits (264), Expect = 2e-21
 Identities = 53/70 (75%), Positives = 62/70 (88%)
 Frame = -2

Query: 446 KHFSDSTVITIAHRITSVLDSDMVVLLDHGLILENDSPSKLLENKSSLFAKLVAEYTVRS 267
           +HFSD TVITIAHRITSVLDSDMV+LL HGLI E DSP++LLENKSS F++LVAEYTVRS
Sbjct: 60  QHFSDCTVITIAHRITSVLDSDMVLLLSHGLIEEYDSPTRLLENKSSSFSQLVAEYTVRS 119

Query: 266 SSSFDNGTGL 237
           ++ F+  TGL
Sbjct: 120 NTRFEKSTGL 129


>ref|XP_002303920.1| multidrug resistance protein ABC transporter family [Populus
            trichocarpa] gi|222841352|gb|EEE78899.1| multidrug
            resistance protein ABC transporter family [Populus
            trichocarpa]
          Length = 1305

 Score =  105 bits (262), Expect = 4e-21
 Identities = 52/70 (74%), Positives = 62/70 (88%)
 Frame = -2

Query: 446  KHFSDSTVITIAHRITSVLDSDMVVLLDHGLILENDSPSKLLENKSSLFAKLVAEYTVRS 267
            +HFSD TVITIAHRITSVLDSDMV+LL HGLI E DSP++LLENKSS F++LVAEYTVRS
Sbjct: 1235 QHFSDCTVITIAHRITSVLDSDMVLLLSHGLIEEYDSPTRLLENKSSSFSQLVAEYTVRS 1294

Query: 266  SSSFDNGTGL 237
            ++SF+   G+
Sbjct: 1295 NTSFEKSAGI 1304


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