BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00016563
         (1234 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002511129.1| ribosomal pseudouridine synthase, putative [...   374   e-101
ref|XP_002321729.1| predicted protein [Populus trichocarpa] gi|2...   372   e-100
ref|XP_003634223.1| PREDICTED: RNA pseudourine synthase 7-like i...   365   2e-98
emb|CBI15710.3| unnamed protein product [Vitis vinifera]              358   1e-96
ref|XP_004138251.1| PREDICTED: RNA pseudourine synthase 7-like [...   345   1e-92

>ref|XP_002511129.1| ribosomal pseudouridine synthase, putative [Ricinus communis]
            gi|223550244|gb|EEF51731.1| ribosomal pseudouridine
            synthase, putative [Ricinus communis]
          Length = 385

 Score =  374 bits (959), Expect = e-101
 Identities = 183/249 (73%), Positives = 209/249 (83%), Gaps = 8/249 (3%)
 Frame = -1

Query: 1189 IQVHPCGQYRKNTLVGILQAEHDLAPLF-LHRLDRLVSGLLILARSAAKADLFRQEIEGG 1013
            + VHPCGQYRKNT+VGILQAEH+LAPLF +HRLDRLVSGLLILAR+A KADLFRQEIE G
Sbjct: 136  VPVHPCGQYRKNTVVGILQAEHNLAPLFPVHRLDRLVSGLLILARNALKADLFRQEIEAG 195

Query: 1012 MVQKQYIAKVIGVFPEEEQVVNANVDYNAREGRSSAEEASCPGDIPPKGKSACTKFTRIS 833
            MVQKQY+AKV+GVFPE+EQVV  N++YNAREGRS+AE  +   D PPKGK+ACTKFTRIS
Sbjct: 196  MVQKQYVAKVVGVFPEDEQVVGVNINYNAREGRSTAEVGNSCVDSPPKGKTACTKFTRIS 255

Query: 832  TNGAYSTVLCQPITGRTHQIRVHLQYTGHPIANDTVYLHNIVATRSTEGVPANKAA---- 665
            TNG +S VLC+PITGRTHQIRVHLQYTGHPIAND +YL    A+RS EG+ A++AA    
Sbjct: 256  TNGTHSIVLCKPITGRTHQIRVHLQYTGHPIANDFLYLSEHAASRSAEGMSADRAACSSS 315

Query: 664  --IPNKDDSSET-EESFNDDFSIDPMCTNCPNLVPKGYGGHEEGLWLHCVKYSGPAWVYE 494
              +  +D  S+T EE+   DFSIDPMCTNCPNL PKGY  +EE LWLHCV+YSGP WVYE
Sbjct: 316  YCVTPQDFCSDTHEENSVQDFSIDPMCTNCPNLAPKGYDVYEECLWLHCVQYSGPGWVYE 375

Query: 493  CPYPDWAIL 467
            CPYPDWAIL
Sbjct: 376  CPYPDWAIL 384


>ref|XP_002321729.1| predicted protein [Populus trichocarpa] gi|222868725|gb|EEF05856.1|
            predicted protein [Populus trichocarpa]
          Length = 388

 Score =  372 bits (954), Expect = e-100
 Identities = 179/249 (71%), Positives = 206/249 (82%), Gaps = 9/249 (3%)
 Frame = -1

Query: 1189 IQVHPCGQYRKNTLVGILQAEHDLAPLF-LHRLDRLVSGLLILARSAAKADLFRQEIEGG 1013
            + VHPCGQYRKNT+VG+LQAEH LAPLF +HRLDRLVSGLLILAR+A +ADLFRQEIE G
Sbjct: 139  VPVHPCGQYRKNTVVGVLQAEHGLAPLFPVHRLDRLVSGLLILARNATRADLFRQEIEAG 198

Query: 1012 MVQKQYIAKVIGVFPEEEQVVNANVDYNAREGRSSAEEA-SCPGDIPPKGKSACTKFTRI 836
             VQKQY+AKVIGVFPE+EQ+V+ NV+YNAREGRS+ E   SC G  P KGK+ACTKFTRI
Sbjct: 199  KVQKQYVAKVIGVFPEDEQIVDVNVNYNAREGRSTVEVGNSCDGS-PIKGKTACTKFTRI 257

Query: 835  STNGAYSTVLCQPITGRTHQIRVHLQYTGHPIANDTVYLHNIVATRSTEGVPANKAA--- 665
             TNG +S VLC+PITGRTHQIRVHLQYTGHPIAND +YL   V  RS+EGV A++AA   
Sbjct: 258  GTNGIHSIVLCKPITGRTHQIRVHLQYTGHPIANDILYLSENVTNRSSEGVNADRAAHSP 317

Query: 664  ----IPNKDDSSETEESFNDDFSIDPMCTNCPNLVPKGYGGHEEGLWLHCVKYSGPAWVY 497
                +P  + S + E+S  +DF IDPMCTNCPNLVPKGY GHEEGLWLHCV+YSG  WVY
Sbjct: 318  NNCLVPENNSSDKYEDSTEEDFDIDPMCTNCPNLVPKGYDGHEEGLWLHCVQYSGSGWVY 377

Query: 496  ECPYPDWAI 470
            +CPYPDWA+
Sbjct: 378  QCPYPDWAV 386


>ref|XP_003634223.1| PREDICTED: RNA pseudourine synthase 7-like isoform 2 [Vitis vinifera]
            gi|359491114|ref|XP_002280549.2| PREDICTED: RNA
            pseudourine synthase 7-like isoform 1 [Vitis vinifera]
          Length = 386

 Score =  365 bits (936), Expect = 2e-98
 Identities = 177/250 (70%), Positives = 203/250 (81%), Gaps = 11/250 (4%)
 Frame = -1

Query: 1189 IQVHPCGQYRKNTLVGILQAEHDLAPLF-LHRLDRLVSGLLILARSAAKADLFRQEIEGG 1013
            + VHPCGQYRKNT+VGILQAEH LAPLF +HRLDRLVSGLLILARSA+KAD FRQ+IE G
Sbjct: 134  VPVHPCGQYRKNTVVGILQAEHGLAPLFPIHRLDRLVSGLLILARSASKADSFRQQIEAG 193

Query: 1012 MVQKQYIAKVIGVFPEEEQVVNANVDYNAREGRSSAEEASCPGDIPPKGKSACTKFTRIS 833
            MVQKQYIAKV GVFP++EQVVN NV+YNAREGRS+ E  +C G+ P KGKSACTKFTRIS
Sbjct: 194  MVQKQYIAKVTGVFPDDEQVVNVNVNYNAREGRSTVEVGNCCGNTPLKGKSACTKFTRIS 253

Query: 832  TNGAYSTVLCQPITGRTHQIRVHLQYTGHPIANDTVYLHNIVATRSTEGVPANKAA---- 665
            TNG +S VLC+PITGRTHQIRVHLQYTGHPIAND +YL      RST+G+ A++AA    
Sbjct: 254  TNGTHSIVLCEPITGRTHQIRVHLQYTGHPIANDMLYLSEFSVDRSTKGLSADRAAANSG 313

Query: 664  --IPNKDDSSETEESFND----DFSIDPMCTNCPNLVPKGYGGHEEGLWLHCVKYSGPAW 503
              +P+    S  +E  +D    DFSIDPMCTNCPNL PKGY   EEGLWLHC++Y GP W
Sbjct: 314  CSLPSSSPKSCVDEYCDDNSTVDFSIDPMCTNCPNLTPKGYDEDEEGLWLHCIRYCGPDW 373

Query: 502  VYECPYPDWA 473
            VYECP+P+WA
Sbjct: 374  VYECPHPEWA 383


>emb|CBI15710.3| unnamed protein product [Vitis vinifera]
          Length = 374

 Score =  358 bits (920), Expect = 1e-96
 Identities = 176/250 (70%), Positives = 202/250 (80%), Gaps = 11/250 (4%)
 Frame = -1

Query: 1189 IQVHPCGQYRKNTLVGILQAEHDLAPLF-LHRLDRLVSGLLILARSAAKADLFRQEIEGG 1013
            + VHPCGQYRKNT+VGILQAEH LAPLF +HRLDRLVSGLLILARSA+KAD FRQ+IE G
Sbjct: 124  VPVHPCGQYRKNTVVGILQAEHGLAPLFPIHRLDRLVSGLLILARSASKADSFRQQIEAG 183

Query: 1012 MVQKQYIAKVIGVFPEEEQVVNANVDYNAREGRSSAEEASCPGDIPPKGKSACTKFTRIS 833
            MVQKQYIAKV GVFP++EQVVN NV+YNAREGRS+    +C G+ P KGKSACTKFTRIS
Sbjct: 184  MVQKQYIAKVTGVFPDDEQVVNVNVNYNAREGRSTV--GNCCGNTPLKGKSACTKFTRIS 241

Query: 832  TNGAYSTVLCQPITGRTHQIRVHLQYTGHPIANDTVYLHNIVATRSTEGVPANKAA---- 665
            TNG +S VLC+PITGRTHQIRVHLQYTGHPIAND +YL      RST+G+ A++AA    
Sbjct: 242  TNGTHSIVLCEPITGRTHQIRVHLQYTGHPIANDMLYLSEFSVDRSTKGLSADRAAANSG 301

Query: 664  --IPNKDDSSETEESFND----DFSIDPMCTNCPNLVPKGYGGHEEGLWLHCVKYSGPAW 503
              +P+    S  +E  +D    DFSIDPMCTNCPNL PKGY   EEGLWLHC++Y GP W
Sbjct: 302  CSLPSSSPKSCVDEYCDDNSTVDFSIDPMCTNCPNLTPKGYDEDEEGLWLHCIRYCGPDW 361

Query: 502  VYECPYPDWA 473
            VYECP+P+WA
Sbjct: 362  VYECPHPEWA 371


>ref|XP_004138251.1| PREDICTED: RNA pseudourine synthase 7-like [Cucumis sativus]
            gi|449501468|ref|XP_004161375.1| PREDICTED: RNA
            pseudourine synthase 7-like [Cucumis sativus]
          Length = 393

 Score =  345 bits (886), Expect = 1e-92
 Identities = 165/251 (65%), Positives = 202/251 (80%), Gaps = 10/251 (3%)
 Frame = -1

Query: 1189 IQVHPCGQYRKNTLVGILQAEHDLAPLF-LHRLDRLVSGLLILARSAAKADLFRQEIEGG 1013
            + VHPCGQYRKNT+VGIL+AEH LAPLF +HRLDRLVSGLLILAR+A+KADLFRQ+IE G
Sbjct: 142  VPVHPCGQYRKNTVVGILEAEHGLAPLFPIHRLDRLVSGLLILARNASKADLFRQQIESG 201

Query: 1012 MVQKQYIAKVIGVFPEEEQVVNANVDYNAREGRSSAEEASCPGDIPPKGKSACTKFTRIS 833
            +V+KQYIA+V+GVFPEEEQVV+AN++YN REGRS+AE      D   KGK+A TKFTRIS
Sbjct: 202  LVKKQYIARVVGVFPEEEQVVDANINYNPREGRSTAEMVDSSTDTRTKGKAAQTKFTRIS 261

Query: 832  TNGAYSTVLCQPITGRTHQIRVHLQYTGHPIANDTVYLHNIVATRSTEGVPANKAAI--- 662
            ++G +S V C+PITGRTHQIRVHLQYTG+PIAND +YL    + RS +   A++AA    
Sbjct: 262  SDGVHSIVSCEPITGRTHQIRVHLQYTGYPIANDALYLTKEASGRSVQKTTADRAAAISF 321

Query: 661  ------PNKDDSSETEESFNDDFSIDPMCTNCPNLVPKGYGGHEEGLWLHCVKYSGPAWV 500
                    +D ++  +E++++DF IDPMCTNCPNL PKGY G EEGLWLHCV+YSGP W+
Sbjct: 322  CSPARDVQEDCANACKENWSEDFGIDPMCTNCPNLAPKGYEGEEEGLWLHCVQYSGPGWI 381

Query: 499  YECPYPDWAIL 467
            YECPYP+WA L
Sbjct: 382  YECPYPEWASL 392