BLASTX nr result

ID: Cimicifuga21_contig00016562 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00016562
         (987 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001236477.1| uncharacterized protein LOC100527724 [Glycin...    89   2e-15
ref|XP_002323519.1| predicted protein [Populus trichocarpa] gi|2...    89   2e-15
ref|XP_002520515.1| Transcriptional regulator SUPERMAN, putative...    88   3e-15
emb|CAN60872.1| hypothetical protein VITISV_016380 [Vitis vinifera]    86   1e-14
ref|XP_002309081.1| predicted protein [Populus trichocarpa] gi|2...    86   2e-14

>ref|NP_001236477.1| uncharacterized protein LOC100527724 [Glycine max]
           gi|255633052|gb|ACU16881.1| unknown [Glycine max]
          Length = 164

 Score = 89.0 bits (219), Expect = 2e-15
 Identities = 63/160 (39%), Positives = 82/160 (51%), Gaps = 7/160 (4%)
 Frame = -1

Query: 858 EGSSYI--RSYKCTFCGKGFSNAQALGGHMNIHRRDRAKLKLPACVETELSLEIVNDEVL 685
           +G+S++  RSY+C FC +GFSNAQALGGHMNIHR+D+AKLK     + + S +I  D   
Sbjct: 21  QGASHVTSRSYECNFCRRGFSNAQALGGHMNIHRKDKAKLK-----QQQSSNQIQQDP-- 73

Query: 684 GVESRGEDIICPLKCPWXXXXXXXXXXXXESHARELRQLPLFAETPSSS-----YGQEIR 520
             +S GE+   P    W            + H     QLPLFAETP+SS      GQ   
Sbjct: 74  -AKSGGEESNKP---NWNWNVSPQEHVIHKRH-----QLPLFAETPTSSETQKPQGQTQT 124

Query: 519 YXXXXXXXXXXXGDATLDLELRLGPETREKRISSTTKVLF 400
                         + LDLELRLGPE +     + T+  F
Sbjct: 125 TTELTLLSTHQDSSSELDLELRLGPEPQNSSAETDTRNFF 164


>ref|XP_002323519.1| predicted protein [Populus trichocarpa] gi|222868149|gb|EEF05280.1|
           predicted protein [Populus trichocarpa]
          Length = 161

 Score = 89.0 bits (219), Expect = 2e-15
 Identities = 63/171 (36%), Positives = 80/171 (46%), Gaps = 1/171 (0%)
 Frame = -1

Query: 918 MERVFPSQGNSSQVMVSTSH-EGSSYIRSYKCTFCGKGFSNAQALGGHMNIHRRDRAKLK 742
           M+    + G S Q   S+   +GSS++RSY C+FC +GF+NAQALGGHMNIHRRDRAKLK
Sbjct: 1   MDISLTTTGKSDQKACSSDDLQGSSHVRSYTCSFCKRGFTNAQALGGHMNIHRRDRAKLK 60

Query: 741 LPACVETELSLEIVNDEVLGVESRGEDIICPLKCPWXXXXXXXXXXXXESHARELRQLPL 562
             A  E  LSL I            E+     + P                + E +QLP 
Sbjct: 61  -QALDENFLSLNITKST--------EETSSAPETPCAPSIEDDCATPRNKASEEFQQLPF 111

Query: 561 FAETPSSSYGQEIRYXXXXXXXXXXXGDATLDLELRLGPETREKRISSTTK 409
             +    + G E                A LDLELRLG E  E    S+T+
Sbjct: 112 IVDAKVGTDGSE----ENKMEFNQATSQAGLDLELRLGSEPHESSTRSSTR 158


>ref|XP_002520515.1| Transcriptional regulator SUPERMAN, putative [Ricinus communis]
           gi|223540357|gb|EEF41928.1| Transcriptional regulator
           SUPERMAN, putative [Ricinus communis]
          Length = 246

 Score = 88.2 bits (217), Expect = 3e-15
 Identities = 69/208 (33%), Positives = 94/208 (45%), Gaps = 34/208 (16%)
 Frame = -1

Query: 930 CVVKMERVFPSQGNSSQVMVSTSHEGSSYIRSYKCTFCGKGFSNAQALGGHMNIHRRDRA 751
           C+V ME    +Q NS Q        GS  +RSY+CTFC +GFSNAQALGGHMNIHR+D+A
Sbjct: 29  CLV-METDQSNQENSDQ---DQERGGSCQVRSYECTFCRRGFSNAQALGGHMNIHRKDKA 84

Query: 750 KLKLPACVETELSLEIV--------------------NDEVLGVESRGEDIICP-LKCPW 634
           KLK     E    L+ V                    +  V+ V+S G+D   P +   W
Sbjct: 85  KLKHSTSNEPRQHLQSVDMISNNIISHSFSPIPTAPSSHPVMEVKS-GQDRSSPMINWAW 143

Query: 633 XXXXXXXXXXXXESHARELRQLPLFAETPSSSYGQEIRY-------------XXXXXXXX 493
                       ++H  E++QL  F + PSS+  Q+  +                     
Sbjct: 144 ILDKESDTCKKNKTHVGEIQQLCFFVDNPSSTKDQDHHHQQEEQQPGNLHGSTEKGLSPS 203

Query: 492 XXXGDATLDLELRLGPETREKRISSTTK 409
                + LDLELRLGPE  +   ++ TK
Sbjct: 204 HGLSSSELDLELRLGPEPHDSSPATGTK 231


>emb|CAN60872.1| hypothetical protein VITISV_016380 [Vitis vinifera]
          Length = 186

 Score = 85.9 bits (211), Expect = 1e-14
 Identities = 66/181 (36%), Positives = 84/181 (46%), Gaps = 18/181 (9%)
 Frame = -1

Query: 903 PSQGNSSQVMVSTSHEGSS-YIRSYKCTFCGKGFSNAQALGGHMNIHRRDRAKLKLPACV 727
           PS     Q+  +   +GS   +R+Y CTFC +GFSNAQALGGHMNIHR+DRAKLK     
Sbjct: 6   PSVEKFEQIACNLDEQGSGEQVRAYTCTFCKRGFSNAQALGGHMNIHRKDRAKLKQTE-D 64

Query: 726 ETELSLEIV-------------NDEVLGVESRGEDIICPLKCPWXXXXXXXXXXXXESHA 586
           E+ LS+++              N   LG  + G+D  C LK P             +   
Sbjct: 65  ESLLSVDMEKKNPLIHPQPSADNLSQLG-STEGKD--CTLKRPLTLSGEDDISPSGKDGM 121

Query: 585 RELRQLPLFAETPSSSYGQEIR----YXXXXXXXXXXXGDATLDLELRLGPETREKRISS 418
            +L QL LF+E PS    Q       +               LDLELRLGPE  E   S 
Sbjct: 122 EKLHQLSLFSEKPSKXNDQRASSXGGHEEKTRHSHHGSSQKELDLELRLGPEPHETSASG 181

Query: 417 T 415
           +
Sbjct: 182 S 182


>ref|XP_002309081.1| predicted protein [Populus trichocarpa] gi|222855057|gb|EEE92604.1|
           predicted protein [Populus trichocarpa]
          Length = 164

 Score = 85.5 bits (210), Expect = 2e-14
 Identities = 60/165 (36%), Positives = 79/165 (47%), Gaps = 1/165 (0%)
 Frame = -1

Query: 900 SQGNSSQVMVSTSH-EGSSYIRSYKCTFCGKGFSNAQALGGHMNIHRRDRAKLKLPACVE 724
           S G S Q++  + + + SS++RSY C FC +GFSNAQALGGHMNIHRRDRAKLK  A  E
Sbjct: 8   STGKSDQIVCDSDYLQDSSHVRSYTCAFCKRGFSNAQALGGHMNIHRRDRAKLK-QASDE 66

Query: 723 TELSLEIVNDEVLGVESRGEDIICPLKCPWXXXXXXXXXXXXESHARELRQLPLFAETPS 544
             LSL+I       + +R     C L                   + E++ LP   +  +
Sbjct: 67  NFLSLDITK-STEEISTRAPKTPCAL-----PVDQHVSFTLRNKASEEVQPLPFIVDVKA 120

Query: 543 SSYGQEIRYXXXXXXXXXXXGDATLDLELRLGPETREKRISSTTK 409
            + G E                A LDLELRLG    E    S+ +
Sbjct: 121 GTDGDE----DNKMQLNQATMQAGLDLELRLGSNPHESSTRSSPR 161


Top