BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00016543
         (479 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002280518.1| PREDICTED: pentatricopeptide repeat-containi...   128   5e-28
ref|XP_003589614.1| Pentatricopeptide repeat-containing protein ...   123   2e-26
ref|XP_003552899.1| PREDICTED: pentatricopeptide repeat-containi...   121   5e-26
ref|XP_003530344.1| PREDICTED: pentatricopeptide repeat-containi...   121   5e-26
ref|XP_003601368.1| Pentatricopeptide repeat-containing protein ...   120   1e-25

>ref|XP_002280518.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g62350-like [Vitis vinifera]
          Length = 248

 Score =  128 bits (321), Expect = 5e-28
 Identities = 63/76 (82%), Positives = 70/76 (92%)
 Frame = -1

Query: 230 TASSPSLSIWRRKKEMGKEGLVIVKELKRLKPDPCRFDRFMRTHVSRLLKSDLVAVLAEF 51
           +AS PSLSIWRRKKEMGKEGL+  KELKRL+ DP RFDRFMR+ VSRLL+SDLV+VLAEF
Sbjct: 40  SASRPSLSIWRRKKEMGKEGLIAAKELKRLRSDPVRFDRFMRSSVSRLLRSDLVSVLAEF 99

Query: 50  QRQDQVFLSMKIYDVV 3
           QRQDQVFLSMK+YDVV
Sbjct: 100 QRQDQVFLSMKLYDVV 115


>ref|XP_003589614.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355478662|gb|AES59865.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 232

 Score =  123 bits (308), Expect = 2e-26
 Identities = 59/78 (75%), Positives = 70/78 (89%)
 Frame = -1

Query: 236 SGTASSPSLSIWRRKKEMGKEGLVIVKELKRLKPDPCRFDRFMRTHVSRLLKSDLVAVLA 57
           +G+AS PSLSIWRRKKE+GKEGL+I KELKRL+ DP R DRF+R++VSRLLKSDLV+VL 
Sbjct: 19  TGSASKPSLSIWRRKKELGKEGLIITKELKRLQSDPVRLDRFVRSNVSRLLKSDLVSVLF 78

Query: 56  EFQRQDQVFLSMKIYDVV 3
           EF RQD VFLSMK+YD+V
Sbjct: 79  EFHRQDNVFLSMKLYDIV 96


>ref|XP_003552899.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g62350-like [Glycine max]
          Length = 234

 Score =  121 bits (304), Expect = 5e-26
 Identities = 60/78 (76%), Positives = 68/78 (87%)
 Frame = -1

Query: 236 SGTASSPSLSIWRRKKEMGKEGLVIVKELKRLKPDPCRFDRFMRTHVSRLLKSDLVAVLA 57
           S  ASSPSLSIWRRKKEMGKEGLV+ KELKR + DP R DRF+R+ VSRLLKSDLVAVLA
Sbjct: 21  SSGASSPSLSIWRRKKEMGKEGLVVAKELKRFRSDPVRLDRFIRSSVSRLLKSDLVAVLA 80

Query: 56  EFQRQDQVFLSMKIYDVV 3
           EFQRQ+Q FL +K+YD+V
Sbjct: 81  EFQRQNQFFLCVKLYDIV 98


>ref|XP_003530344.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g62350-like [Glycine max]
          Length = 232

 Score =  121 bits (304), Expect = 5e-26
 Identities = 60/78 (76%), Positives = 68/78 (87%)
 Frame = -1

Query: 236 SGTASSPSLSIWRRKKEMGKEGLVIVKELKRLKPDPCRFDRFMRTHVSRLLKSDLVAVLA 57
           S  ASSPSLSIWRRKKEMGKEGLV+ KELKR + DP R DRF+R+ VSRLLKSDLVAVLA
Sbjct: 23  SSGASSPSLSIWRRKKEMGKEGLVVAKELKRFRSDPVRLDRFIRSSVSRLLKSDLVAVLA 82

Query: 56  EFQRQDQVFLSMKIYDVV 3
           EFQRQ+Q FL +K+YD+V
Sbjct: 83  EFQRQNQFFLCVKLYDIV 100


>ref|XP_003601368.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355490416|gb|AES71619.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 144

 Score =  120 bits (301), Expect = 1e-25
 Identities = 58/78 (74%), Positives = 69/78 (88%)
 Frame = -1

Query: 236 SGTASSPSLSIWRRKKEMGKEGLVIVKELKRLKPDPCRFDRFMRTHVSRLLKSDLVAVLA 57
           +G+AS PSLSIWRRKKE+GKEGL+I KELKRL+ DP R DRF+R++VSRLLKSDLV+VL 
Sbjct: 23  TGSASKPSLSIWRRKKELGKEGLIITKELKRLQTDPVRLDRFVRSNVSRLLKSDLVSVLF 82

Query: 56  EFQRQDQVFLSMKIYDVV 3
           EF  QD VFLSMK+YD+V
Sbjct: 83  EFHGQDNVFLSMKLYDIV 100