BLASTX nr result

ID: Cimicifuga21_contig00016495 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00016495
         (304 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003632855.1| PREDICTED: dof zinc finger protein DOF1.7-li...    77   1e-12
ref|XP_002327532.1| f-box family protein [Populus trichocarpa] g...    72   6e-11
ref|XP_002534123.1| zinc finger protein, putative [Ricinus commu...    69   5e-10
ref|XP_003533016.1| PREDICTED: dof zinc finger protein DOF1.7 [G...    64   1e-08
ref|XP_003529737.1| PREDICTED: dof zinc finger protein DOF1.7-li...    57   2e-06

>ref|XP_003632855.1| PREDICTED: dof zinc finger protein DOF1.7-like [Vitis vinifera]
          Length = 216

 Score = 77.0 bits (188), Expect = 1e-12
 Identities = 42/83 (50%), Positives = 55/83 (66%)
 Frame = +3

Query: 54  KSEPIGIFSQAIVPVDQDRQLLDITGSFSSLLASTAQFGNLMEGFNSSGPSLRTFQFGDF 233
           KSEP GI+   +   DQDR++LDI+GSFSSLLAS  QFG+L+E  N +G S+R      F
Sbjct: 106 KSEPSGIY---VTAADQDRRMLDISGSFSSLLASNGQFGSLLESLNPTG-SVRGVPLSAF 161

Query: 234 TEHSNSSSIENPALDLQSTNNQD 302
           +E  NS S   PA++LQS  N +
Sbjct: 162 SETPNSDSGRTPAMELQSNGNSE 184


>ref|XP_002327532.1| f-box family protein [Populus trichocarpa]
           gi|222836086|gb|EEE74507.1| f-box family protein
           [Populus trichocarpa]
          Length = 235

 Score = 71.6 bits (174), Expect = 6e-11
 Identities = 34/71 (47%), Positives = 47/71 (66%)
 Frame = +3

Query: 90  VPVDQDRQLLDITGSFSSLLASTAQFGNLMEGFNSSGPSLRTFQFGDFTEHSNSSSIENP 269
           V  D DR++LD+ GSFSSLLAS+ QFG++ EG +S G  L+  + G F E  N+    NP
Sbjct: 129 VEADPDRKILDMGGSFSSLLASSGQFGSIFEGLDSGGSGLKMVRMGGFGEDLNAGPSRNP 188

Query: 270 ALDLQSTNNQD 302
            LDLQ ++N +
Sbjct: 189 GLDLQGSSNNN 199


>ref|XP_002534123.1| zinc finger protein, putative [Ricinus communis]
           gi|223525818|gb|EEF28260.1| zinc finger protein,
           putative [Ricinus communis]
          Length = 250

 Score = 68.6 bits (166), Expect = 5e-10
 Identities = 33/66 (50%), Positives = 45/66 (68%)
 Frame = +3

Query: 99  DQDRQLLDITGSFSSLLASTAQFGNLMEGFNSSGPSLRTFQFGDFTEHSNSSSIENPALD 278
           DQ+R++LD+ GSFSSLL+S  Q+G   +G N +G SL+  Q G F E  NS   +NP LD
Sbjct: 138 DQERKILDLGGSFSSLLSSNGQYGGFFDGLNPTGSSLKMVQIGGFAEDLNSG--QNPNLD 195

Query: 279 LQSTNN 296
           +Q +NN
Sbjct: 196 VQGSNN 201


>ref|XP_003533016.1| PREDICTED: dof zinc finger protein DOF1.7 [Glycine max]
          Length = 213

 Score = 63.9 bits (154), Expect = 1e-08
 Identities = 36/73 (49%), Positives = 49/73 (67%), Gaps = 4/73 (5%)
 Frame = +3

Query: 93  PVDQDRQLLDITG-SFSSLLASTAQFGNLMEGFNSSGPSLRTFQFGDFTEHS---NSSSI 260
           PVDQD+++L+I G SFSSLLAS+  FG L+EG N +G SL+  +FG+        N  S 
Sbjct: 107 PVDQDQRVLNIGGGSFSSLLASSGHFGTLLEGLNPTGSSLKMGEFGEGVSSDPGLNLVSG 166

Query: 261 ENPALDLQSTNNQ 299
           +NP L +QSTN +
Sbjct: 167 QNPGLQVQSTNGR 179


>ref|XP_003529737.1| PREDICTED: dof zinc finger protein DOF1.7-like [Glycine max]
          Length = 211

 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 34/74 (45%), Positives = 45/74 (60%), Gaps = 4/74 (5%)
 Frame = +3

Query: 93  PVDQDRQLLDITG-SFSSLLASTAQFGNLMEGFNSSGPSLRTFQFGDFTEHS---NSSSI 260
           PVDQD+++L+I G SFSSLLAS+  FG L+EG N SG  L+  +F +        N  S 
Sbjct: 106 PVDQDQRVLNIGGGSFSSLLASSGHFGTLLEGLNPSGSGLKMGEFVEGVSSDPGLNLDSG 165

Query: 261 ENPALDLQSTNNQD 302
            NP L +QS  N +
Sbjct: 166 LNPDLQVQSNENSE 179


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