BLASTX nr result
ID: Cimicifuga21_contig00016471
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cimicifuga21_contig00016471
(845 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CBI20740.3| unnamed protein product [Vitis vinifera] 305 1e-84
ref|XP_002280293.2| PREDICTED: endoribonuclease Dicer homolog 3a... 305 1e-84
gb|AEC12444.1| ribonuclease III family protein DCL3 [Gossypium h... 290 4e-80
ref|XP_004158269.1| PREDICTED: LOW QUALITY PROTEIN: endoribonucl... 291 3e-79
ref|XP_004144277.1| PREDICTED: endoribonuclease Dicer homolog 3a... 291 3e-79
>emb|CBI20740.3| unnamed protein product [Vitis vinifera]
Length = 1688
Score = 305 bits (782), Expect(2) = 1e-84
Identities = 159/260 (61%), Positives = 193/260 (74%)
Frame = -2
Query: 781 HVSISTEECELYRTSFVQCRHFTEEALHIFEESLPDDYEKFFSMEFDCLKAIQMGYISPK 602
+VS + EE E YR S QC+ F +E L I LP + + E D LKA+ GYI+PK
Sbjct: 347 NVSNAQEEFEFYRQSSSQCKCFLQEVLGIIGGYLPHGDGNYLNSESDILKAVDKGYITPK 406
Query: 601 LYELIQIFQSFRKSKELLCLIFVERIISAKVIQRFTRKLNYXXXXXXXXXXXXXXSVDAL 422
L+EL+Q+FQSF ++++LCLIFVERII+AKVI+RF +K+ Y SVDAL
Sbjct: 407 LHELLQLFQSFGVARKVLCLIFVERIITAKVIERFIKKIIYLSHFTVSYLTGSNSSVDAL 466
Query: 421 TPKMQKKTLDSFRSGEVNLLFTTDVAEEGIHVANCSCVIRFDLPRTVRSYVQSRGRARQD 242
PK Q++TL+SFRSG+VNLLF TDV EEGIHV NCSCVIRFDLP+TVRSYVQSRGRARQ
Sbjct: 467 APKAQRETLESFRSGKVNLLFATDVVEEGIHVPNCSCVIRFDLPKTVRSYVQSRGRARQS 526
Query: 241 GSLYILMLERGNIEQRNMLFDIIRSEHSMADSTLNRDPDACVSKVCYVEGPDTYSVESTG 62
S +I+MLERGN EQR+ LFDIIRSE+SM D+ NRDPD K +E D+Y V+STG
Sbjct: 527 DSQFIIMLERGNTEQRDQLFDIIRSEYSMTDTATNRDPDGYTLKAYTIEEMDSYFVDSTG 586
Query: 61 ASVTADSSVSLIYRFCEKLP 2
ASVTADSSVSLI+R+CEKLP
Sbjct: 587 ASVTADSSVSLIHRYCEKLP 606
Score = 35.0 bits (79), Expect(2) = 1e-84
Identities = 13/18 (72%), Positives = 15/18 (83%)
Frame = -1
Query: 845 HCLDGLGFLCAYEAAKVC 792
+CLD LG +CAYEA KVC
Sbjct: 327 YCLDDLGLICAYEAVKVC 344
>ref|XP_002280293.2| PREDICTED: endoribonuclease Dicer homolog 3a-like [Vitis vinifera]
Length = 1648
Score = 305 bits (782), Expect(2) = 1e-84
Identities = 159/260 (61%), Positives = 193/260 (74%)
Frame = -2
Query: 781 HVSISTEECELYRTSFVQCRHFTEEALHIFEESLPDDYEKFFSMEFDCLKAIQMGYISPK 602
+VS + EE E YR S QC+ F +E L I LP + + E D LKA+ GYI+PK
Sbjct: 339 NVSNAQEEFEFYRQSSSQCKCFLQEVLGIIGGYLPHGDGNYLNSESDILKAVDKGYITPK 398
Query: 601 LYELIQIFQSFRKSKELLCLIFVERIISAKVIQRFTRKLNYXXXXXXXXXXXXXXSVDAL 422
L+EL+Q+FQSF ++++LCLIFVERII+AKVI+RF +K+ Y SVDAL
Sbjct: 399 LHELLQLFQSFGVARKVLCLIFVERIITAKVIERFIKKIIYLSHFTVSYLTGSNSSVDAL 458
Query: 421 TPKMQKKTLDSFRSGEVNLLFTTDVAEEGIHVANCSCVIRFDLPRTVRSYVQSRGRARQD 242
PK Q++TL+SFRSG+VNLLF TDV EEGIHV NCSCVIRFDLP+TVRSYVQSRGRARQ
Sbjct: 459 APKAQRETLESFRSGKVNLLFATDVVEEGIHVPNCSCVIRFDLPKTVRSYVQSRGRARQS 518
Query: 241 GSLYILMLERGNIEQRNMLFDIIRSEHSMADSTLNRDPDACVSKVCYVEGPDTYSVESTG 62
S +I+MLERGN EQR+ LFDIIRSE+SM D+ NRDPD K +E D+Y V+STG
Sbjct: 519 DSQFIIMLERGNTEQRDQLFDIIRSEYSMTDTATNRDPDGYTLKAYTIEEMDSYFVDSTG 578
Query: 61 ASVTADSSVSLIYRFCEKLP 2
ASVTADSSVSLI+R+CEKLP
Sbjct: 579 ASVTADSSVSLIHRYCEKLP 598
Score = 35.0 bits (79), Expect(2) = 1e-84
Identities = 13/18 (72%), Positives = 15/18 (83%)
Frame = -1
Query: 845 HCLDGLGFLCAYEAAKVC 792
+CLD LG +CAYEA KVC
Sbjct: 319 YCLDDLGLICAYEAVKVC 336
>gb|AEC12444.1| ribonuclease III family protein DCL3 [Gossypium hirsutum]
Length = 1655
Score = 290 bits (741), Expect(2) = 4e-80
Identities = 150/258 (58%), Positives = 197/258 (76%), Gaps = 2/258 (0%)
Frame = -2
Query: 769 STEECELYRTSFVQCRHFTEEALHIFEESLPDDYEKFFSMEFDCLKAIQMGYISPKLYEL 590
+TEE + YR S +Q ++F EE ESLP + F + FD LKA+ +GYISPKL+EL
Sbjct: 342 TTEESKAYRESVLQYKNFLEEVQCRIGESLPLGDKNFLNSGFDYLKAVDLGYISPKLHEL 401
Query: 589 IQIFQSFRKSKELLCLIFVERIISAKVIQRFTRKLNYXXXXXXXXXXXXXXSVDALTPKM 410
+Q+FQSF +++++LCLIFVERII+AKVI+RF +K++ SVD+L PK+
Sbjct: 402 LQLFQSFGETRQVLCLIFVERIITAKVIERFAKKVSCLSHFMVSYMTGSNTSVDSLAPKI 461
Query: 409 QKKTLDSFRSGEVNLLFTTDVAEEGIHVANCSCVIRFDLPRTVRSYVQSRGRARQDGSLY 230
QK+TL+SFRSG+VNLLFTTDV EEGIHV NC VIRFDLP+TVRSYVQSRGRARQ+ S +
Sbjct: 462 QKETLESFRSGKVNLLFTTDVVEEGIHVPNCCYVIRFDLPKTVRSYVQSRGRARQNNSEF 521
Query: 229 ILMLERGNIEQRNMLFDIIRSEHSMADSTLNRDPDA--CVSKVCYVEGPDTYSVESTGAS 56
I+MLERGN++QRN L+DIIRSE+SM +S + RDPD+ C+ K E + + V++TGAS
Sbjct: 522 IMMLERGNVKQRNQLYDIIRSEYSMTNSAIKRDPDSDPCLLKDHTFEETNVFIVDATGAS 581
Query: 55 VTADSSVSLIYRFCEKLP 2
VTADS+VSLI+++C KLP
Sbjct: 582 VTADSAVSLIHKYCGKLP 599
Score = 35.4 bits (80), Expect(2) = 4e-80
Identities = 12/18 (66%), Positives = 14/18 (77%)
Frame = -1
Query: 845 HCLDGLGFLCAYEAAKVC 792
HCLD LG +CAYEA +C
Sbjct: 318 HCLDNLGLICAYEAVNIC 335
>ref|XP_004158269.1| PREDICTED: LOW QUALITY PROTEIN: endoribonuclease Dicer homolog
3a-like [Cucumis sativus]
Length = 1639
Score = 291 bits (745), Expect(2) = 3e-79
Identities = 147/260 (56%), Positives = 196/260 (75%)
Frame = -2
Query: 781 HVSISTEECELYRTSFVQCRHFTEEALHIFEESLPDDYEKFFSMEFDCLKAIQMGYISPK 602
+VS+ EE ++YR SF+Q +HF EEAL + ESL + E ++ FD KA+++GYISPK
Sbjct: 332 NVSVPNEESDVYRESFLQYKHFLEEALLVIGESLSLENENVPTLGFDLWKAVELGYISPK 391
Query: 601 LYELIQIFQSFRKSKELLCLIFVERIISAKVIQRFTRKLNYXXXXXXXXXXXXXXSVDAL 422
L+EL+Q+F+SF S+++LCLIFVERII+A VI+R +K+ SV AL
Sbjct: 392 LFELLQLFESFGVSRQVLCLIFVERIIAANVIERIVKKVENLSHFTVSYVTGCDASVGAL 451
Query: 421 TPKMQKKTLDSFRSGEVNLLFTTDVAEEGIHVANCSCVIRFDLPRTVRSYVQSRGRARQD 242
PK+QK+TL+ F G++NLLF+TDV EEG+HV NCS V+RFDLP+TVRSYVQSRGRARQ+
Sbjct: 452 APKVQKETLELFCHGKLNLLFSTDVVEEGLHVPNCSFVVRFDLPKTVRSYVQSRGRARQN 511
Query: 241 GSLYILMLERGNIEQRNMLFDIIRSEHSMADSTLNRDPDACVSKVCYVEGPDTYSVESTG 62
S YIL+LERGN++QR +LFD+IRS+ SM D+ ++RD DACV K + D Y VE+TG
Sbjct: 512 NSQYILLLERGNLKQRALLFDVIRSDRSMTDAAMSRDLDACVLKPFSLMETDCYIVEATG 571
Query: 61 ASVTADSSVSLIYRFCEKLP 2
ASVTADSSV L+Y++C+KLP
Sbjct: 572 ASVTADSSVGLVYQYCKKLP 591
Score = 30.8 bits (68), Expect(2) = 3e-79
Identities = 12/17 (70%), Positives = 14/17 (82%)
Frame = -1
Query: 845 HCLDGLGFLCAYEAAKV 795
+CLD LG +CAYEA KV
Sbjct: 312 YCLDELGIMCAYEAIKV 328
>ref|XP_004144277.1| PREDICTED: endoribonuclease Dicer homolog 3a-like [Cucumis sativus]
Length = 1359
Score = 291 bits (745), Expect(2) = 3e-79
Identities = 147/260 (56%), Positives = 196/260 (75%)
Frame = -2
Query: 781 HVSISTEECELYRTSFVQCRHFTEEALHIFEESLPDDYEKFFSMEFDCLKAIQMGYISPK 602
+VS+ EE ++YR SF+Q +HF EEAL + ESL + E ++ FD KA+++GYISPK
Sbjct: 332 NVSVPNEESDVYRESFLQYKHFLEEALLVIGESLSLENENVPTLGFDLWKAVELGYISPK 391
Query: 601 LYELIQIFQSFRKSKELLCLIFVERIISAKVIQRFTRKLNYXXXXXXXXXXXXXXSVDAL 422
L+EL+Q+F+SF S+++LCLIFVERII+A VI+R +K+ SV AL
Sbjct: 392 LFELLQLFESFGVSRQVLCLIFVERIIAANVIERIVKKVENLSHFTVSYVTGCNASVGAL 451
Query: 421 TPKMQKKTLDSFRSGEVNLLFTTDVAEEGIHVANCSCVIRFDLPRTVRSYVQSRGRARQD 242
PK+QK+TL+ F G++NLLF+TDV EEG+HV NCS V+RFDLP+TVRSYVQSRGRARQ+
Sbjct: 452 APKVQKETLELFCHGKLNLLFSTDVVEEGLHVPNCSFVVRFDLPKTVRSYVQSRGRARQN 511
Query: 241 GSLYILMLERGNIEQRNMLFDIIRSEHSMADSTLNRDPDACVSKVCYVEGPDTYSVESTG 62
S YIL+LERGN++QR +LFD+IRS+ SM D+ ++RD DACV K + D Y VE+TG
Sbjct: 512 NSQYILLLERGNLKQRALLFDVIRSDRSMTDAAMSRDLDACVLKPFSLMETDCYIVEATG 571
Query: 61 ASVTADSSVSLIYRFCEKLP 2
ASVTADSSV L+Y++C+KLP
Sbjct: 572 ASVTADSSVGLVYQYCKKLP 591
Score = 30.8 bits (68), Expect(2) = 3e-79
Identities = 12/17 (70%), Positives = 14/17 (82%)
Frame = -1
Query: 845 HCLDGLGFLCAYEAAKV 795
+CLD LG +CAYEA KV
Sbjct: 312 YCLDELGIMCAYEAIKV 328