BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00016462
         (1000 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002284795.1| PREDICTED: F-box protein SKIP23-like [Vitis ...   161   2e-37
emb|CAN67605.1| hypothetical protein VITISV_030993 [Vitis vinifera]   161   3e-37
emb|CAN69116.1| hypothetical protein VITISV_031843 [Vitis vinifera]   160   4e-37
ref|XP_002300674.1| predicted protein [Populus trichocarpa] gi|2...   151   3e-34
ref|XP_002510618.1| ubiquitin-protein ligase, putative [Ricinus ...   149   8e-34

>ref|XP_002284795.1| PREDICTED: F-box protein SKIP23-like [Vitis vinifera]
          Length = 389

 Score =  161 bits (408), Expect = 2e-37
 Identities = 109/312 (34%), Positives = 159/312 (50%), Gaps = 38/312 (12%)
 Frame = -2

Query: 972 KGSSHGWLVTILDSFEVFLLNPFLSINKKIELPSLIT-----------------LQSNGG 844
           +GSSHGWL+ + ++ E+FLLNP      K+ LP L T                 L+++ G
Sbjct: 90  RGSSHGWLLILDEAPEIFLLNPLT--RSKVHLPPLSTFPNVVRFNFADVGREYALRTSSG 147

Query: 843 D-------GINAHYIVKAVLSANPRSNPNYAVMAIYSDSGKLAFFRPGDGAWTKIHKKYQ 685
           D        +   +I K +LS++P +  ++  + I + +G LA  R  D +WT +     
Sbjct: 148 DVYTRSLKKMRDSFIKKTILSSSPANGSDFIAVVILNQTGDLALCRKSDDSWTFLEDAQS 207

Query: 684 LFMDVVYCGDKFYAVNECGEVFSCDVNHRPPNLSIIS-PRLLGVREHDSKYIVESFGDLL 508
              DV++    FYAVN+ G +  CDV+   P +SII  P+  G    D +Y+VES  +LL
Sbjct: 208 YAEDVIFHRGLFYAVNKYGSIAVCDVSGSSPRVSIIEMPQQFG---GDLQYLVESGEELL 264

Query: 507 QIVRSRDLNCG----------RTCGFKVFKLDMRSTEWVEVKSLDGRIICIGKNSSMSLS 358
            + R  DL             RT  F+V +LD+++  W  V SL  R + +G+N S+SLS
Sbjct: 265 LVTRYLDLTYDVEPDQTSLIYRTTRFQVCRLDLKAPRWEVVSSLGDRALFLGENLSLSLS 324

Query: 357 ASDFPECKPNCIYFTDDYC---YRVCYLKYDTGIFDLEDGSITPHYLGERVVFGMFLRPS 187
           + DFP CK NCIY+TDDY    Y     + D GIF+LEDGSI P        F +   P 
Sbjct: 325 SVDFPGCKGNCIYYTDDYSEDNYDGIGGEQDLGIFNLEDGSIEPLPCSH---FRIRWPPP 381

Query: 186 VWIEPTV*HVPC 151
           +W+ P     PC
Sbjct: 382 LWVTPN----PC 389


>emb|CAN67605.1| hypothetical protein VITISV_030993 [Vitis vinifera]
          Length = 1290

 Score =  161 bits (407), Expect = 3e-37
 Identities = 110/290 (37%), Positives = 157/290 (54%), Gaps = 19/290 (6%)
 Frame = -2

Query: 981  RFCKGSSHGWLVTILDSFEVFLLNPFLSINKKIE----LPSLITLQSNGGDGINAH--YI 820
            ++C GS +GWLVTI    ++ LLNP   +   +      P+L TL  +   G  +   +I
Sbjct: 1004 KWCWGSPYGWLVTIGTDLDMCLLNPLTRVQILLPSLRACPNLNTLIDSSTQGSRSKDIFI 1063

Query: 819  VKAVLSANPRSNPNYAVMAIYSDSGKLAFFRPGDGAWTKIHKKYQLFMDVVYCGDKFYAV 640
             KAVLS+ P S+P+ AVM IYSD G+LAF +PG   WT +  +     D++Y    F AV
Sbjct: 1064 YKAVLSSAP-SSPDCAVMIIYSDYGRLAFTKPGHQTWTLLESESGPVDDIIYFNGSFLAV 1122

Query: 639  NECGEVFSCDVNHRPPNLSII----SPRLLGVRE--HDSKYIVESFGDLLQIVRS----- 493
            N   EV+ CD++     L  I    +P L  V E  +++KY+VES G++  + R+     
Sbjct: 1123 NLSWEVWICDISGS--QLKTIRFAAAPALQDVDEIEYEAKYLVESGGEIYMVTRNLYDTA 1180

Query: 492  -RDLNCGRTCGFKVFKLDMRSTEWVEVKSLDGRIICIGKNSSMSLSASDFPECKPNCIYF 316
             RD+   RT  F V KLDM +  W EV++LD     +G N S S  ASD+PE + N IYF
Sbjct: 1181 RRDIPYMRTWTFSVLKLDMCNKRWEEVENLDHCSFFLGNNHSFSTWASDYPEFRKNSIYF 1240

Query: 315  TDDYC-YRVCYLKYDTGIFDLEDGSITPHYLGERVVFGMFLRPSVWIEPT 169
            TDDYC +      +D GI++ ++  I  HY        MF  P +WI P+
Sbjct: 1241 TDDYCGFLNIPRNFDMGIYNFQNTQI-EHYPVGHDALSMFSAP-LWIRPS 1288


>emb|CAN69116.1| hypothetical protein VITISV_031843 [Vitis vinifera]
          Length = 389

 Score =  160 bits (405), Expect = 4e-37
 Identities = 109/312 (34%), Positives = 158/312 (50%), Gaps = 38/312 (12%)
 Frame = -2

Query: 972 KGSSHGWLVTILDSFEVFLLNPFLSINKKIELPSLIT-----------------LQSNGG 844
           +GSSHGWL+ + ++ E+FLLNP      K+ LP L T                 L+++ G
Sbjct: 90  RGSSHGWLLILDEAPEIFLLNPLT--RSKVHLPPLSTFPNVVRFNFADVGREYALRTSSG 147

Query: 843 D-------GINAHYIVKAVLSANPRSNPNYAVMAIYSDSGKLAFFRPGDGAWTKIHKKYQ 685
           D        +   +I K +LS++P +  ++  + I + +G LA  R  D +WT +     
Sbjct: 148 DVYTRSLKKMRDSFIKKTILSSSPANGSDFIAVVILNQTGDLALCRKSDDSWTFLEDAQS 207

Query: 684 LFMDVVYCGDKFYAVNECGEVFSCDVNHRPPNLSIIS-PRLLGVREHDSKYIVESFGDLL 508
              DV++    FYAVN+ G +  CDV+   P +SII  P+  G    D +Y+VES  +LL
Sbjct: 208 YSEDVIFHRGLFYAVNKYGSIAVCDVSGSSPRVSIIEMPQQFG---GDLQYLVESGEELL 264

Query: 507 QIVRSRDLNCG----------RTCGFKVFKLDMRSTEWVEVKSLDGRIICIGKNSSMSLS 358
            + R  DL             RT  F+V +LD ++  W  V SL  R + +G+N S+SLS
Sbjct: 265 LVTRYLDLTYDVEXDQTSLIYRTTRFQVCRLDSKAPRWEVVSSLGDRALFLGENLSLSLS 324

Query: 357 ASDFPECKPNCIYFTDDYC---YRVCYLKYDTGIFDLEDGSITPHYLGERVVFGMFLRPS 187
           + DFP CK NCIY+TDDY    Y     + D GIF+LEDGSI P        F +   P 
Sbjct: 325 SVDFPGCKGNCIYYTDDYSEDNYDGIGGEQDLGIFNLEDGSIEPLPCSH---FRIRWPPP 381

Query: 186 VWIEPTV*HVPC 151
           +W+ P     PC
Sbjct: 382 LWVTPN----PC 389


>ref|XP_002300674.1| predicted protein [Populus trichocarpa] gi|222842400|gb|EEE79947.1|
           predicted protein [Populus trichocarpa]
          Length = 393

 Score =  151 bits (381), Expect = 3e-34
 Identities = 106/310 (34%), Positives = 153/310 (49%), Gaps = 37/310 (11%)
 Frame = -2

Query: 969 GSSHGWLVTILDSFEVFLLNPFLSINKKIELPSLIT-----------------LQSNGGD 841
           GSSHGWL+ + DS  + ++NP     +KI LP++ +                 L +  G+
Sbjct: 93  GSSHGWLIILDDSPSILVINPLT--RRKIHLPAISSFPNVVSFDYANVGREYLLVNPQGE 150

Query: 840 GINAH-------YIVKAVLSANP--RSNPNYAVMAIYSDSGKLAFFRPGDGAWTKIHKKY 688
              A        +I K V+S++P  +    +  MAI   +G LA+ + GD  W  +    
Sbjct: 151 RNTASLRQMRDGFIKKVVMSSSPLEKKGDFFVAMAILCSTGDLAYCKNGDECWNIVENSR 210

Query: 687 QLFMDVVYCGDKFYAVNECGEVFSCDVNHRPPNLSII-SPRLLGVREHDSKYIVESFGDL 511
               DV+Y    FYAVN+ G++  CDVN   P +S I +PR +G    D +Y+V S   L
Sbjct: 211 SFSEDVIYFNGLFYAVNKAGQIVVCDVNGNSPKVSFIETPRQIG---GDMQYLVSSGDGL 267

Query: 510 LQIVRSRDLNCG------RTCGFKVFKLDMRSTEWVEVKSLDGRIICIGKNSSMSLSASD 349
           L + R  DL+        +T  F+VFKLD+    W  V SL   ++ IG+NSS++LSAS 
Sbjct: 268 LLVTRYLDLDVEFDIFIYKTARFEVFKLDLNGPRWERVTSLGDMMLFIGENSSLALSASG 327

Query: 348 FPECKPNCIYFTDDYC---YRVCYLKYDTGIFDLEDGSITPHYLGERVVFG-MFLRPSVW 181
              C  +CIY+TDDY    Y     ++D GIF L DGSI P     R  +  +   P +W
Sbjct: 328 LSGCMGDCIYYTDDYSANNYDGHIGEHDLGIFKLSDGSIEPLPCYPRNSYSRLQWPPPLW 387

Query: 180 IEPTV*HVPC 151
           I P     PC
Sbjct: 388 ISPN----PC 393


>ref|XP_002510618.1| ubiquitin-protein ligase, putative [Ricinus communis]
            gi|223551319|gb|EEF52805.1| ubiquitin-protein ligase,
            putative [Ricinus communis]
          Length = 398

 Score =  149 bits (377), Expect = 8e-34
 Identities = 103/316 (32%), Positives = 160/316 (50%), Gaps = 39/316 (12%)
 Frame = -2

Query: 981  RFCKGSSHGWLVTILDSFEVFLLNPF----LSINKKIELPSLIT-----------LQSNG 847
            R C GSSHGWL+ + D+  + L+NP     LS+      P++I+           L++  
Sbjct: 91   RHC-GSSHGWLMILDDTPTILLINPLTRAKLSLPPLSSFPNVISFNYSDIGREYALRNLL 149

Query: 846  GDGINAH-------YIVKAVLSANPRSNPNYAVMAIYSDSGKLAFFRPGDGAWTKIHKKY 688
            G+ +          +I K VLS++P  + N+ V+AI + +  LA+ R GD +W+ +    
Sbjct: 150  GERVTVSLRQMRDSFIRKVVLSSSPLKDNNFVVIAILNQTDDLAYCRNGDKSWSLVENAR 209

Query: 687  QLFMDVVYCGDKFYAVNECGEVFSCDVNHRPPNLSII-SPRLLGVREHDSKYIVESFGDL 511
                DV++    FYAVN+ G++  CD++   P +S + +PR  G    D +Y+V S  +L
Sbjct: 210  SFCEDVIFVNGMFYAVNKAGQIVICDISSDSPRVSFMETPRQAG---GDMQYLVNSGDEL 266

Query: 510  LQIVRSRDLNCG------------RTCGFKVFKLDMRSTEWVEVKSLDGRIICIGKNSSM 367
            L + R  DL               RT  F+VF+LD    +W+ + +L  + + IG+NSS+
Sbjct: 267  LLVTRYLDLEYEFDHPDMEPHLIYRTIRFEVFRLDWNGPQWLRMSTLGDKALFIGENSSL 326

Query: 366  SLSASDFPECKPNCIYFTDDYC---YRVCYLKYDTGIFDLEDGSITPHYLGER-VVFGMF 199
            SLSA+DF  C  NCIY+TDDY    Y   +  +D GIF L D +I P     R     + 
Sbjct: 327  SLSATDFSGCMGNCIYYTDDYLDANYDGHFGDHDLGIFKLCDETIEPLPCYPRNFTSPLQ 386

Query: 198  LRPSVWIEPTV*HVPC 151
              P +W+ P     PC
Sbjct: 387  WSPPLWVSPN----PC 398