BLASTX nr result

ID: Cimicifuga21_contig00016447 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00016447
         (1024 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002274643.2| PREDICTED: methyl-CpG-binding domain-contain...   181   3e-43
emb|CBI34941.3| unnamed protein product [Vitis vinifera]              181   3e-43
ref|XP_002517349.1| DNA binding protein, putative [Ricinus commu...   170   5e-40
ref|XP_004167238.1| PREDICTED: LOW QUALITY PROTEIN: methyl-CpG-b...   167   4e-39
ref|XP_004141185.1| PREDICTED: methyl-CpG-binding domain-contain...   166   9e-39

>ref|XP_002274643.2| PREDICTED: methyl-CpG-binding domain-containing protein 9-like [Vitis
            vinifera]
          Length = 2164

 Score =  181 bits (459), Expect = 3e-43
 Identities = 87/130 (66%), Positives = 107/130 (82%)
 Frame = +2

Query: 614  LDSAAPEVHIEDCCMVPESSFKPLSGKTIQILRCLKISLLDMEAALPEEALKPSKAHFMN 793
            L++  PE+ +  CC++P+SS +PL GK  QILR LKI+LLDM+AALPEEALKPS+A    
Sbjct: 1989 LNNNGPEMEVGRCCVIPQSSLRPLVGKVYQILRQLKINLLDMDAALPEEALKPSRADLEK 2048

Query: 794  RFAWRVFVKSAESIYELIQASIVFENMIMSQYLRNGWWYWSSLSAAVKTSTVSSLALRIY 973
            R AWR FVKSAE+I+E++QA+I+ E+MI ++YL NGWWYWSSLSAA KTSTVSSLALRIY
Sbjct: 2049 RLAWRAFVKSAETIFEMVQATIMLEDMIKTEYLMNGWWYWSSLSAAAKTSTVSSLALRIY 2108

Query: 974  SLDDAILYVK 1003
            SLD AI Y K
Sbjct: 2109 SLDAAIAYEK 2118



 Score =  126 bits (316), Expect = 1e-26
 Identities = 71/200 (35%), Positives = 114/200 (57%), Gaps = 6/200 (3%)
 Frame = +2

Query: 8    LRNSEPMESDLKQNIMQWLRLINQDSQQYTNPVPDDTPVNLPKSPIAKKVTASSLTTHAS 187
            L++++P E +LK++I+   +L  +D +   +P   D+   L + P ++   +  L T A 
Sbjct: 1685 LKDADPREKELKESILHLHKLRFRDWKLTGDPDQVDSQTTLSRFPNSENAFSDGLLTKAG 1744

Query: 188  SVLNQKYGPCLDADFTFTSKNCGVDAESTCKRRLYRCECLEPVWPSRHHCFSCHQTFSAM 367
             +L +KYGP  + +   +SK   + ++ T + ++YRCECLEP+W SRHHC SCH+TF   
Sbjct: 1745 ILLGKKYGPWFEPEIADSSKKWDLRSKVTNESKMYRCECLEPIWSSRHHCPSCHRTFFTD 1804

Query: 368  EEFKDHNDRNCNSGPLTHNDSYGKDS-LKFKEMITSESTNVAFRNEKDTVEVPEEG---- 532
             + ++HND +C SGP T   S    S LK K  + S+ +      + D VE+P+ G    
Sbjct: 1805 IQLEEHNDGSCRSGPPTSEKSKENSSHLKGKGTMKSKISREESTGDIDMVEIPKGGCSQP 1864

Query: 533  GSRLI-ITHKKEVCPHDFVE 589
             SRLI   ++  VCP+DF E
Sbjct: 1865 RSRLIKFQNEGLVCPYDFEE 1884


>emb|CBI34941.3| unnamed protein product [Vitis vinifera]
          Length = 1907

 Score =  181 bits (459), Expect = 3e-43
 Identities = 87/130 (66%), Positives = 107/130 (82%)
 Frame = +2

Query: 614  LDSAAPEVHIEDCCMVPESSFKPLSGKTIQILRCLKISLLDMEAALPEEALKPSKAHFMN 793
            L++  PE+ +  CC++P+SS +PL GK  QILR LKI+LLDM+AALPEEALKPS+A    
Sbjct: 1662 LNNNGPEMEVGRCCVIPQSSLRPLVGKVYQILRQLKINLLDMDAALPEEALKPSRADLEK 1721

Query: 794  RFAWRVFVKSAESIYELIQASIVFENMIMSQYLRNGWWYWSSLSAAVKTSTVSSLALRIY 973
            R AWR FVKSAE+I+E++QA+I+ E+MI ++YL NGWWYWSSLSAA KTSTVSSLALRIY
Sbjct: 1722 RLAWRAFVKSAETIFEMVQATIMLEDMIKTEYLMNGWWYWSSLSAAAKTSTVSSLALRIY 1781

Query: 974  SLDDAILYVK 1003
            SLD AI Y K
Sbjct: 1782 SLDAAIAYEK 1791


>ref|XP_002517349.1| DNA binding protein, putative [Ricinus communis]
            gi|223543360|gb|EEF44891.1| DNA binding protein, putative
            [Ricinus communis]
          Length = 2145

 Score =  170 bits (431), Expect = 5e-40
 Identities = 85/132 (64%), Positives = 102/132 (77%)
 Frame = +2

Query: 608  SPLDSAAPEVHIEDCCMVPESSFKPLSGKTIQILRCLKISLLDMEAALPEEALKPSKAHF 787
            S L    PE+    CC+VPESS  PL GK   ILR LKI+LLDMEAALPEEAL+P+K   
Sbjct: 1969 SSLGKCFPEMGPGCCCVVPESSLMPLVGKVSSILRQLKINLLDMEAALPEEALRPAKGQL 2028

Query: 788  MNRFAWRVFVKSAESIYELIQASIVFENMIMSQYLRNGWWYWSSLSAAVKTSTVSSLALR 967
              R+AWR +VKSAESIY++++A+I+ E MI ++YLRN WWYWSSLSAA KTSTV+SLALR
Sbjct: 2029 GRRWAWRAYVKSAESIYQMVRATIMLEEMIKTEYLRNEWWYWSSLSAAAKTSTVASLALR 2088

Query: 968  IYSLDDAILYVK 1003
            IYSLD  I+Y K
Sbjct: 2089 IYSLDACIVYEK 2100



 Score =  114 bits (286), Expect = 3e-23
 Identities = 69/200 (34%), Positives = 109/200 (54%), Gaps = 6/200 (3%)
 Frame = +2

Query: 8    LRNSEPMESDLKQNIMQWLRLINQDSQQYTNPVPDDTPVNLPKSPIAKKVTASSLTTHAS 187
            L N+   E +LK++IMQWL+L  Q+SQ+  +PV ++    L       +   S+  T A+
Sbjct: 1655 LGNNNQKEIELKESIMQWLKLRFQESQRIRDPVQEECRAGLSTIRNNDQTAFSNCLTKAT 1714

Query: 188  SVLNQKYGPCLDADFTFTSKNCGVDAESTCKRRLYRCECLEPVWPSRHHCFSCHQTFSAM 367
             +L + YG  ++ D +   K  G  A  T + + YRC+CLE +WPSR+HC+SCH+T S  
Sbjct: 1715 LLLEKNYGAFVELDTSDMLKKRGKKARGTNEEKTYRCDCLELIWPSRNHCYSCHRTSSND 1774

Query: 368  EEFKDHNDRNCNSGPLTHNDS-YGKDSLKFKEMITSESTNVAFRNEKDTVEVPEEGGSRL 544
             EF+ H+D  C+S P +   S    DSLK +  + +E T    ++E D +     G S L
Sbjct: 1775 VEFEGHSDGRCSSVPQSREKSEETNDSLKGRGNVKAEVTWKEKKSEIDKLHSSMGGLSEL 1834

Query: 545  ---IITHKKE--VCPHDFVE 589
               +I  + E   CP+D ++
Sbjct: 1835 RARLIKFQNEGINCPYDLLD 1854


>ref|XP_004167238.1| PREDICTED: LOW QUALITY PROTEIN: methyl-CpG-binding domain-containing
            protein 9-like [Cucumis sativus]
          Length = 1277

 Score =  167 bits (423), Expect = 4e-39
 Identities = 81/132 (61%), Positives = 105/132 (79%)
 Frame = +2

Query: 608  SPLDSAAPEVHIEDCCMVPESSFKPLSGKTIQILRCLKISLLDMEAALPEEALKPSKAHF 787
            S +D+   E  I  C ++P+SS +PL GK +Q++R LK++LLDM+AALP+EALKPSK H 
Sbjct: 1099 SXMDNRFSEFGIGRCFVIPQSSQRPLVGKILQVVRGLKMNLLDMDAALPDEALKPSKLHI 1158

Query: 788  MNRFAWRVFVKSAESIYELIQASIVFENMIMSQYLRNGWWYWSSLSAAVKTSTVSSLALR 967
              R+AWR FVKSA +IYE++QA+I  E+MI ++YL+N WWYWSSLSAA K STVSSLALR
Sbjct: 1159 ERRWAWRAFVKSAGTIYEMVQATIALEDMIRTEYLKNEWWYWSSLSAAAKISTVSSLALR 1218

Query: 968  IYSLDDAILYVK 1003
            I+SLD AI+Y K
Sbjct: 1219 IFSLDAAIIYEK 1230



 Score =  103 bits (257), Expect = 7e-20
 Identities = 63/208 (30%), Positives = 109/208 (52%), Gaps = 16/208 (7%)
 Frame = +2

Query: 8    LRNSEPMESDLKQNIMQWLRLINQDSQQYTNPVPDDTPVNLPKSPIAKKVTASS-LTTHA 184
            L++S+P E +LK++I+QWL+   Q S +  N  P++   +   S   +K+  S  L   A
Sbjct: 788  LKDSDPKERELKESILQWLKPKLQTSSRSNNQSPEEQLKDSSSSSDVEKLECSGFLVNRA 847

Query: 185  SSVLNQKYGPCLDADFTFTSKNCGVDAESTCK-RRLYRCECLEPVWPSRHHCFSCHQTFS 361
            S++L  KYGP L+   T    N  +D     +  +++RC C+EPVWPSR+HC SCH++FS
Sbjct: 848  SALLESKYGPFLEF-VTPDDLNRWLDKARLAEDEKMFRCVCMEPVWPSRYHCLSCHKSFS 906

Query: 362  AMEEFKDHNDRNCNSGPLT-------HNDSYGKDSLKFK-------EMITSESTNVAFRN 499
               E ++H++  C+S P +        + S  K ++KF+        M+ +E++   F +
Sbjct: 907  TDVELEEHDNGQCSSLPASCDGIKEVGDSSKSKCNIKFESKQEESSSMVIAETSRGYFNH 966

Query: 500  EKDTVEVPEEGGSRLIITHKKEVCPHDF 583
                ++   +G           +CP+DF
Sbjct: 967  SMGLIKYQNDG----------MMCPYDF 984


>ref|XP_004141185.1| PREDICTED: methyl-CpG-binding domain-containing protein 9-like
            [Cucumis sativus]
          Length = 2131

 Score =  166 bits (420), Expect = 9e-39
 Identities = 80/130 (61%), Positives = 104/130 (80%)
 Frame = +2

Query: 614  LDSAAPEVHIEDCCMVPESSFKPLSGKTIQILRCLKISLLDMEAALPEEALKPSKAHFMN 793
            +D+   E  I  C ++P+SS +PL GK +Q++R LK++LLDM+AALP+EALKPSK H   
Sbjct: 1955 MDNRFSEFGIGRCFVIPQSSQRPLVGKILQVVRGLKMNLLDMDAALPDEALKPSKLHIER 2014

Query: 794  RFAWRVFVKSAESIYELIQASIVFENMIMSQYLRNGWWYWSSLSAAVKTSTVSSLALRIY 973
            R+AWR FVKSA +IYE++QA+I  E+MI ++YL+N WWYWSSLSAA K STVSSLALRI+
Sbjct: 2015 RWAWRAFVKSAGTIYEMVQATIALEDMIRTEYLKNEWWYWSSLSAAAKISTVSSLALRIF 2074

Query: 974  SLDDAILYVK 1003
            SLD AI+Y K
Sbjct: 2075 SLDAAIIYEK 2084



 Score =  103 bits (257), Expect = 7e-20
 Identities = 63/208 (30%), Positives = 109/208 (52%), Gaps = 16/208 (7%)
 Frame = +2

Query: 8    LRNSEPMESDLKQNIMQWLRLINQDSQQYTNPVPDDTPVNLPKSPIAKKVTASS-LTTHA 184
            L++S+P E +LK++I+QWL+   Q S +  N  P++   +   S   +K+  S  L   A
Sbjct: 1642 LKDSDPKERELKESILQWLKPKLQTSSRSNNQSPEEQLKDSSSSSDVEKLECSGFLVNRA 1701

Query: 185  SSVLNQKYGPCLDADFTFTSKNCGVDAESTCK-RRLYRCECLEPVWPSRHHCFSCHQTFS 361
            S++L  KYGP L+   T    N  +D     +  +++RC C+EPVWPSR+HC SCH++FS
Sbjct: 1702 SALLESKYGPFLEF-VTPDDLNRWLDKARLAEDEKMFRCVCMEPVWPSRYHCLSCHRSFS 1760

Query: 362  AMEEFKDHNDRNCNSGPLT-------HNDSYGKDSLKFK-------EMITSESTNVAFRN 499
               E ++H++  C+S P +        + S  K ++KF+        M+ +E++   F +
Sbjct: 1761 TDVELEEHDNGQCSSLPASCDGIKEVGDSSKSKCNIKFESKQEESSSMVIAETSRGYFNH 1820

Query: 500  EKDTVEVPEEGGSRLIITHKKEVCPHDF 583
                ++   +G           +CP+DF
Sbjct: 1821 SMGLIKYQNDG----------MMCPYDF 1838


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