BLASTX nr result

ID: Cimicifuga21_contig00016436 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00016436
         (215 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI21840.3| unnamed protein product [Vitis vinifera]               82   4e-14
ref|XP_002273904.1| PREDICTED: pentatricopeptide repeat-containi...    82   4e-14
emb|CAN73453.1| hypothetical protein VITISV_024964 [Vitis vinifera]    79   3e-13
ref|XP_003633265.1| PREDICTED: pentatricopeptide repeat-containi...    78   8e-13
emb|CBI21839.3| unnamed protein product [Vitis vinifera]               78   8e-13

>emb|CBI21840.3| unnamed protein product [Vitis vinifera]
          Length = 446

 Score = 82.0 bits (201), Expect = 4e-14
 Identities = 38/71 (53%), Positives = 49/71 (69%)
 Frame = +1

Query: 1   AIEKGKKPFASTWNILATGYVEANQIPKAVEAIKAAFLTRRPGWKPNRDTLAACLVYLKQ 180
           AIE+G++P A TW+ LA GY E NQ+ KAV+ +K A L    GWKPN  TL+ACL YLK 
Sbjct: 319 AIEQGEEPIAVTWDALAAGYHENNQMEKAVDTLKKALLATSQGWKPNPVTLSACLEYLKG 378

Query: 181 QGDAEKTEEFV 213
           +GD E+ E  +
Sbjct: 379 KGDVEEAENLI 389


>ref|XP_002273904.1| PREDICTED: pentatricopeptide repeat-containing protein At2g20710,
           mitochondrial [Vitis vinifera]
          Length = 499

 Score = 82.0 bits (201), Expect = 4e-14
 Identities = 38/71 (53%), Positives = 49/71 (69%)
 Frame = +1

Query: 1   AIEKGKKPFASTWNILATGYVEANQIPKAVEAIKAAFLTRRPGWKPNRDTLAACLVYLKQ 180
           AIE+G++P A TW+ LA GY E NQ+ KAV+ +K A L    GWKPN  TL+ACL YLK 
Sbjct: 372 AIEQGEEPIAVTWDALAAGYHENNQMEKAVDTLKKALLATSQGWKPNPVTLSACLEYLKG 431

Query: 181 QGDAEKTEEFV 213
           +GD E+ E  +
Sbjct: 432 KGDVEEAENLI 442


>emb|CAN73453.1| hypothetical protein VITISV_024964 [Vitis vinifera]
          Length = 499

 Score = 79.3 bits (194), Expect = 3e-13
 Identities = 37/71 (52%), Positives = 48/71 (67%)
 Frame = +1

Query: 1   AIEKGKKPFASTWNILATGYVEANQIPKAVEAIKAAFLTRRPGWKPNRDTLAACLVYLKQ 180
           AIE+G++P A TW+ LA GY E NQ+ KAV+ +K A L    GWKPN  TL+ACL YLK 
Sbjct: 372 AIEQGEEPIAVTWDALAAGYHENNQMEKAVDTLKKALLATSQGWKPNPVTLSACLEYLKG 431

Query: 181 QGDAEKTEEFV 213
           + D E+ E  +
Sbjct: 432 KXDVEEAENLI 442


>ref|XP_003633265.1| PREDICTED: pentatricopeptide repeat-containing protein At2g20710,
           mitochondrial-like [Vitis vinifera]
          Length = 461

 Score = 77.8 bits (190), Expect = 8e-13
 Identities = 36/64 (56%), Positives = 45/64 (70%)
 Frame = +1

Query: 16  KKPFASTWNILATGYVEANQIPKAVEAIKAAFLTRRPGWKPNRDTLAACLVYLKQQGDAE 195
           + P+ASTWNILA GYVE  Q+PKAVE +K A    R GW+PN   L AC+ YL+ QG+ E
Sbjct: 363 RMPYASTWNILAKGYVEDKQMPKAVEMLKKAISVGRKGWRPNSIILDACIEYLEGQGNLE 422

Query: 196 KTEE 207
           + EE
Sbjct: 423 EIEE 426


>emb|CBI21839.3| unnamed protein product [Vitis vinifera]
          Length = 501

 Score = 77.8 bits (190), Expect = 8e-13
 Identities = 36/64 (56%), Positives = 45/64 (70%)
 Frame = +1

Query: 16  KKPFASTWNILATGYVEANQIPKAVEAIKAAFLTRRPGWKPNRDTLAACLVYLKQQGDAE 195
           + P+ASTWNILA GYVE  Q+PKAVE +K A    R GW+PN   L AC+ YL+ QG+ E
Sbjct: 363 RMPYASTWNILAKGYVEDKQMPKAVEMLKKAISVGRKGWRPNSIILDACIEYLEGQGNLE 422

Query: 196 KTEE 207
           + EE
Sbjct: 423 EIEE 426


Top