BLASTX nr result
ID: Cimicifuga21_contig00016431
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cimicifuga21_contig00016431
(1087 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_003543366.1| PREDICTED: ribosomal RNA processing protein ... 133 7e-29
ref|XP_002267225.2| PREDICTED: uncharacterized protein LOC100247... 132 1e-28
ref|XP_003550635.1| PREDICTED: ribosomal RNA processing protein ... 130 6e-28
emb|CAN72961.1| hypothetical protein VITISV_016489 [Vitis vinifera] 129 2e-27
ref|XP_002528509.1| nnp-1 protein, putative [Ricinus communis] g... 123 7e-26
>ref|XP_003543366.1| PREDICTED: ribosomal RNA processing protein 1 homolog [Glycine max]
Length = 541
Score = 133 bits (335), Expect = 7e-29
Identities = 94/213 (44%), Positives = 114/213 (53%), Gaps = 2/213 (0%)
Frame = -1
Query: 907 DVSDIENRNMSNGENLTNDGGLITFNESVISNLQMQFEKIAAEVGMDMGGASSIDS--VA 734
D SD EN NG N +NDG ++ NE+VI+NLQ QFEK+A E G+D G AS+ DS A
Sbjct: 358 DSSDKENVACENGGN-SNDGSVVLLNETVIANLQRQFEKVAEEAGLDDGVASACDSPQAA 416
Query: 733 SPVIDVKPKKRKRAKSIDGQVLLADGEGVIGDSAVGKSGEKSAKKVRFSMKNNVVWKXXX 554
S KKRKR KS+ G+ + +SAV KSGEKS KKVRFSM NN+VWK
Sbjct: 417 SATGGTVSKKRKRTKSLKGKASQDSADLDGEESAVAKSGEKSTKKVRFSMINNLVWKPHN 476
Query: 553 XXXXXXXXXXXSATPRGSALKXXXXXXXXXXXXXXXXPRGSALKKGIPAGXXXXXXXXXX 374
SATP RGSALKKG+P G
Sbjct: 477 PLPPQSLRLPPSATP-----------------------RGSALKKGVPPG----PIREMP 509
Query: 373 XKQRSGSLKKARKGLKGVSPSVKRLKKLRSYSA 275
+ LK+ARK +KGV+P VKRLKKL+S +A
Sbjct: 510 LPTKKPKLKRARKAIKGVAP-VKRLKKLKSRAA 541
>ref|XP_002267225.2| PREDICTED: uncharacterized protein LOC100247924 [Vitis vinifera]
Length = 547
Score = 132 bits (333), Expect = 1e-28
Identities = 91/209 (43%), Positives = 112/209 (53%), Gaps = 4/209 (1%)
Frame = -1
Query: 892 ENRNMSNGENL----TNDGGLITFNESVISNLQMQFEKIAAEVGMDMGGASSIDSVASPV 725
EN + N EN ++D LI FNESVISNLQMQFEK+AAEVG+ DS PV
Sbjct: 363 ENVTVPNDENSNCEPSSDQSLIDFNESVISNLQMQFEKVAAEVGLGNELMGLCDSPTRPV 422
Query: 724 IDVKPKKRKRAKSIDGQVLLADGEGVIGDSAVGKSGEKSAKKVRFSMKNNVVWKXXXXXX 545
KKRKRAK+ + + + G+ SA+ KS KSAKKV+FS+KNN+VWK
Sbjct: 423 NGTVSKKRKRAKNNNEHDVSSQGDD--ESSALAKSKGKSAKKVKFSIKNNLVWKPQSPLP 480
Query: 544 XXXXXXXXSATPRGSALKXXXXXXXXXXXXXXXXPRGSALKKGIPAGXXXXXXXXXXXKQ 365
S TP RGSALKKGIP G K+
Sbjct: 481 PQSLRLPPSVTP-----------------------RGSALKKGIPPGPVREMPQTKKVKK 517
Query: 364 RSGSLKKARKGLKGVSPSVKRLKKLRSYS 278
R+ SLKK R G+K +SP++KRLKKL+S S
Sbjct: 518 RAKSLKKGRNGIKSISPAIKRLKKLQSLS 546
>ref|XP_003550635.1| PREDICTED: ribosomal RNA processing protein 1 homolog A-like
[Glycine max]
Length = 433
Score = 130 bits (327), Expect = 6e-28
Identities = 94/213 (44%), Positives = 112/213 (52%), Gaps = 2/213 (0%)
Frame = -1
Query: 907 DVSDIENRNMSNGENLTNDGGLITFNESVISNLQMQFEKIAAEVGMDMGGASSIDS--VA 734
D SD EN NG NL ND + NE++I+NLQ QFEK+A E G+D G AS+ DS
Sbjct: 250 DSSDKENVASENGGNL-NDESAVLLNETMIANLQRQFEKVAEEAGLDDGVASACDSPQAV 308
Query: 733 SPVIDVKPKKRKRAKSIDGQVLLADGEGVIGDSAVGKSGEKSAKKVRFSMKNNVVWKXXX 554
S KKRKR KS+ G+V E +SAV K GEKS KKVRFSMKNN+VWK
Sbjct: 309 SASGRTLSKKRKRTKSLKGKVSQDSAELDGEESAVAKGGEKSKKKVRFSMKNNLVWKPQN 368
Query: 553 XXXXXXXXXXXSATPRGSALKXXXXXXXXXXXXXXXXPRGSALKKGIPAGXXXXXXXXXX 374
SATP RGSALKKG+P G
Sbjct: 369 PLPPQSLRLPPSATP-----------------------RGSALKKGLPPG----PIREMP 401
Query: 373 XKQRSGSLKKARKGLKGVSPSVKRLKKLRSYSA 275
+ LK+ARK +KGV+P VKRLKKL+S +A
Sbjct: 402 LPTKKPKLKRARKSIKGVAP-VKRLKKLKSRAA 433
>emb|CAN72961.1| hypothetical protein VITISV_016489 [Vitis vinifera]
Length = 547
Score = 129 bits (323), Expect = 2e-27
Identities = 90/209 (43%), Positives = 111/209 (53%), Gaps = 4/209 (1%)
Frame = -1
Query: 892 ENRNMSNGENL----TNDGGLITFNESVISNLQMQFEKIAAEVGMDMGGASSIDSVASPV 725
EN + N EN ++D LI FNESVISNLQMQFEK+AAEVG+ DS V
Sbjct: 363 ENVTVPNDENSNCEPSSDQSLIDFNESVISNLQMQFEKVAAEVGLGNELMGLCDSPTRLV 422
Query: 724 IDVKPKKRKRAKSIDGQVLLADGEGVIGDSAVGKSGEKSAKKVRFSMKNNVVWKXXXXXX 545
KKRKRAK+ + + + G+ SA+ KS KSAKKV+FS+KNN+VWK
Sbjct: 423 NGTVSKKRKRAKNNNEHDVSSQGDD--ESSALAKSKGKSAKKVKFSIKNNLVWKPQSPLP 480
Query: 544 XXXXXXXXSATPRGSALKXXXXXXXXXXXXXXXXPRGSALKKGIPAGXXXXXXXXXXXKQ 365
S TP RGSALKKGIP G K+
Sbjct: 481 PQSLRLPPSVTP-----------------------RGSALKKGIPPGPVREMPQTKKVKK 517
Query: 364 RSGSLKKARKGLKGVSPSVKRLKKLRSYS 278
R+ SLKK R G+K +SP++KRLKKL+S S
Sbjct: 518 RAKSLKKGRNGIKSISPAIKRLKKLQSLS 546
>ref|XP_002528509.1| nnp-1 protein, putative [Ricinus communis]
gi|223532069|gb|EEF33878.1| nnp-1 protein, putative
[Ricinus communis]
Length = 551
Score = 123 bits (309), Expect = 7e-26
Identities = 92/211 (43%), Positives = 109/211 (51%), Gaps = 5/211 (2%)
Frame = -1
Query: 895 IENRNMSNGENLTNDGGLITFNESVISNLQMQFEKIAAEVGMDMGGASSIDSVASPVIDV 716
I N SN EN +N +IT NESVISNLQMQFEK+AAEVG+D S+ D + V
Sbjct: 365 IPNAINSNEEN-SNAADMITLNESVISNLQMQFEKVAAEVGLDKNVESACDIINVTGNGV 423
Query: 715 KPKKRKRAKSIDGQ----VLLADGEGVIGDSAVGKSGEKSAKKVRFSMKNNVVWKXXXXX 548
KKRKR+KS + Q L D G A GKS EKSAKKVRFSMKNN+VWK
Sbjct: 424 VTKKRKRSKSKESQQPENTELTDEVNADG-GATGKSTEKSAKKVRFSMKNNLVWKPHSPL 482
Query: 547 XXXXXXXXXSATPRGSALKXXXXXXXXXXXXXXXXPRGSALKKGIPAGXXXXXXXXXXXK 368
S TP RGSALKKGIP G
Sbjct: 483 PPQSLRIPPSVTP-----------------------RGSALKKGIPPGPIREMPVATKKA 519
Query: 367 Q-RSGSLKKARKGLKGVSPSVKRLKKLRSYS 278
+ ++ SLKK RK L G+ P ++R KKL++ S
Sbjct: 520 KHKTKSLKKGRKVLSGLVPVIRRPKKLKTVS 550