BLASTX nr result

ID: Cimicifuga21_contig00016426 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00016426
         (711 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002300240.1| predicted protein [Populus trichocarpa] gi|2...   119   8e-25
ref|XP_002285382.1| PREDICTED: uncharacterized protein LOC100250...   114   2e-23
ref|NP_001240079.1| uncharacterized protein LOC100805970 [Glycin...   109   5e-22
gb|AFK33587.1| unknown [Lotus japonicus]                              107   2e-21
ref|XP_004140715.1| PREDICTED: PRKR-interacting protein 1-like [...   106   4e-21

>ref|XP_002300240.1| predicted protein [Populus trichocarpa] gi|222847498|gb|EEE85045.1|
           predicted protein [Populus trichocarpa]
          Length = 173

 Score =  119 bits (297), Expect = 8e-25
 Identities = 59/99 (59%), Positives = 76/99 (76%), Gaps = 1/99 (1%)
 Frame = -2

Query: 683 EGDLQLVSIPKRSSASLPPLPIAATANSNAIVEYTKSA-SQEAEDLEVKLRRIIDNVPVR 507
           +G+LQ+V+ P+++  +LPPLP+AA   S A+VEYT     +E EDLEVKLRRI++NVPVR
Sbjct: 8   DGELQVVAAPEKTKPALPPLPLAARTGSTALVEYTAPVLKEEEEDLEVKLRRILENVPVR 67

Query: 506 VNNTXXXXXXXXXGDFHQYRQMRRKEQDRLARMDAHYEK 390
           V+NT         GDFHQYRQMRR+EQDRLARMDA Y++
Sbjct: 68  VSNTSGSSAGSGSGDFHQYRQMRRREQDRLARMDADYQR 106


>ref|XP_002285382.1| PREDICTED: uncharacterized protein LOC100250399 [Vitis vinifera]
          Length = 178

 Score =  114 bits (285), Expect = 2e-23
 Identities = 61/108 (56%), Positives = 76/108 (70%), Gaps = 1/108 (0%)
 Frame = -2

Query: 710 SSSNSKTVVEGDLQLVSIPKRSSASLPPLPIAATANSNAIVEYTKSAS-QEAEDLEVKLR 534
           SS  SK++ +GDLQ++  P++   +LPPLP      S A+VEY   A  ++ EDLEVKLR
Sbjct: 2   SSGRSKSLTDGDLQVIPAPEKPKPALPPLP--PVVGSMALVEYAPPAPLEDEEDLEVKLR 59

Query: 533 RIIDNVPVRVNNTXXXXXXXXXGDFHQYRQMRRKEQDRLARMDAHYEK 390
           RIID+VPVRV+NT         GDFHQYRQMRRKEQDRLARMD  Y++
Sbjct: 60  RIIDHVPVRVSNTSGSSAGSGSGDFHQYRQMRRKEQDRLARMDVDYQR 107


>ref|NP_001240079.1| uncharacterized protein LOC100805970 [Glycine max]
           gi|255646408|gb|ACU23683.1| unknown [Glycine max]
          Length = 170

 Score =  109 bits (273), Expect = 5e-22
 Identities = 64/98 (65%), Positives = 69/98 (70%), Gaps = 1/98 (1%)
 Frame = -2

Query: 680 GDLQLVSIPKRSSASLPPLPIAATANSNAIVEYTK-SASQEAEDLEVKLRRIIDNVPVRV 504
           GD Q+V  P     S PPLP AA   SNAIVEYT  S  +E EDLEVKLRRIIDNVPVRV
Sbjct: 9   GDFQMVPAP---GTSKPPLPPAAA--SNAIVEYTPVSLKEEEEDLEVKLRRIIDNVPVRV 63

Query: 503 NNTXXXXXXXXXGDFHQYRQMRRKEQDRLARMDAHYEK 390
           +NT         GDFHQYRQMRRKEQDRLARM+  Y+K
Sbjct: 64  SNTSGSSAGSGSGDFHQYRQMRRKEQDRLARMEVDYQK 101


>gb|AFK33587.1| unknown [Lotus japonicus]
          Length = 125

 Score =  107 bits (268), Expect = 2e-21
 Identities = 56/98 (57%), Positives = 68/98 (69%)
 Frame = -2

Query: 683 EGDLQLVSIPKRSSASLPPLPIAATANSNAIVEYTKSASQEAEDLEVKLRRIIDNVPVRV 504
           + D Q+V++P  S   LPP       +S+AIVEYT    +E EDLE+KLRRIIDNVPVRV
Sbjct: 8   DADFQMVAVPGMSKPPLPP-----ATSSSAIVEYTPVFKEEEEDLEIKLRRIIDNVPVRV 62

Query: 503 NNTXXXXXXXXXGDFHQYRQMRRKEQDRLARMDAHYEK 390
           +NT         GDFHQYRQMRRKEQDRLARM+  Y++
Sbjct: 63  SNTSGSSAGSGSGDFHQYRQMRRKEQDRLARMEVDYQR 100


>ref|XP_004140715.1| PREDICTED: PRKR-interacting protein 1-like [Cucumis sativus]
           gi|449486605|ref|XP_004157345.1| PREDICTED:
           PRKR-interacting protein 1-like [Cucumis sativus]
          Length = 172

 Score =  106 bits (265), Expect = 4e-21
 Identities = 58/92 (63%), Positives = 64/92 (69%), Gaps = 4/92 (4%)
 Frame = -2

Query: 653 KRSSASLPPLPIA----ATANSNAIVEYTKSASQEAEDLEVKLRRIIDNVPVRVNNTXXX 486
           +R    +PP P      ATA SNA+VEYT    +E EDLEVKLRRIIDNVPVRV+NT   
Sbjct: 11  RRLVIPMPPKPKPDTQLATAESNALVEYTPPVKEEDEDLEVKLRRIIDNVPVRVSNTSGS 70

Query: 485 XXXXXXGDFHQYRQMRRKEQDRLARMDAHYEK 390
                 GDFHQYRQMRRKEQDRLARMD  Y+K
Sbjct: 71  SAGSGSGDFHQYRQMRRKEQDRLARMDVDYQK 102


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