BLASTX nr result

ID: Cimicifuga21_contig00016417 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00016417
         (817 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002283727.1| PREDICTED: crt homolog 1 [Vitis vinifera] gi...   206   5e-51
ref|XP_002527366.1| conserved hypothetical protein [Ricinus comm...   192   1e-46
ref|XP_003561943.1| PREDICTED: crt homolog 1-like [Brachypodium ...   187   3e-45
gb|EEC69365.1| hypothetical protein OsI_38489 [Oryza sativa Indi...   186   4e-45
gb|AAO64175.1| unknown protein [Arabidopsis thaliana] gi|1107371...   186   5e-45

>ref|XP_002283727.1| PREDICTED: crt homolog 1 [Vitis vinifera]
           gi|302142085|emb|CBI19288.3| unnamed protein product
           [Vitis vinifera]
          Length = 422

 Score =  206 bits (524), Expect = 5e-51
 Identities = 111/188 (59%), Positives = 137/188 (72%)
 Frame = -1

Query: 565 LISIKPPQNPSFSSRTSLMTPFNGDSRVYSRKSYFQRDIERQQPDFKLHCSSEESGISTG 386
           LIS+   QNP +       +P +G S   S K+          P+F++  S++ S  S+ 
Sbjct: 35  LISMHISQNPRYHLHFPSRSPLHGVSSHNSPKT----------PNFRVRASADNSQTSSS 84

Query: 385 RNNGQVVVGSAITVVFAVLNRVLYKLALVPMKEYPFFLAQVTTFGYVAIYFSILFVRYSA 206
            N G V+V SAITV+ AV+NRV YKLALVP+K+YPFFLAQ TTFGY AIYFSIL++RY A
Sbjct: 85  -NTGLVIVCSAITVILAVVNRVFYKLALVPLKQYPFFLAQFTTFGYAAIYFSILYIRYRA 143

Query: 205 GIVTNEMLSLPKGCFVLIGILEALGVAAGMSSGAMLPGPAIPILSQTFLVWQLLFSMLIL 26
           GIVT+EM++LPK  F+ IGILEALGVA+GM+S AMLPGPAIP+L+QTFLVWQL  S LIL
Sbjct: 144 GIVTDEMIALPKSRFMAIGILEALGVASGMASAAMLPGPAIPLLNQTFLVWQLALSTLIL 203

Query: 25  GRKYSLRQ 2
           GRKYS  Q
Sbjct: 204 GRKYSFNQ 211


>ref|XP_002527366.1| conserved hypothetical protein [Ricinus communis]
           gi|223533285|gb|EEF35038.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 429

 Score =  192 bits (487), Expect = 1e-46
 Identities = 95/130 (73%), Positives = 108/130 (83%)
 Frame = -1

Query: 391 TGRNNGQVVVGSAITVVFAVLNRVLYKLALVPMKEYPFFLAQVTTFGYVAIYFSILFVRY 212
           T  NN  +++ SAITV  A+ NRVLYKLALVPMK YPFFLAQ  TFGYV IYFSIL+VRY
Sbjct: 88  TTSNNKLIIISSAITVALAIANRVLYKLALVPMKRYPFFLAQFITFGYVVIYFSILYVRY 147

Query: 211 SAGIVTNEMLSLPKGCFVLIGILEALGVAAGMSSGAMLPGPAIPILSQTFLVWQLLFSML 32
            AGIVTNEM+S+PK  FV IGILEALGVA GM++ AM+PGPAIPIL+QTFLVWQL FS L
Sbjct: 148 RAGIVTNEMISIPKLRFVAIGILEALGVATGMAAAAMIPGPAIPILNQTFLVWQLAFSAL 207

Query: 31  ILGRKYSLRQ 2
           +LGR+YS  Q
Sbjct: 208 LLGRRYSFNQ 217


>ref|XP_003561943.1| PREDICTED: crt homolog 1-like [Brachypodium distachyon]
          Length = 424

 Score =  187 bits (474), Expect = 3e-45
 Identities = 89/129 (68%), Positives = 109/129 (84%)
 Frame = -1

Query: 388 GRNNGQVVVGSAITVVFAVLNRVLYKLALVPMKEYPFFLAQVTTFGYVAIYFSILFVRYS 209
           G +   +   +A TVV AV+NRVLYKLALVPMK YPFFLAQV TFGYV +YFSILF+RY 
Sbjct: 82  GGSGTNITAAAAATVVLAVMNRVLYKLALVPMKNYPFFLAQVLTFGYVIVYFSILFIRYH 141

Query: 208 AGIVTNEMLSLPKGCFVLIGILEALGVAAGMSSGAMLPGPAIPILSQTFLVWQLLFSMLI 29
           AGIV+ EML+LPK  F+LIG+LEALG+A+GM++GAMLPGP+IP+LSQ+FLVWQL+ S++I
Sbjct: 142 AGIVSKEMLALPKSRFILIGLLEALGIASGMAAGAMLPGPSIPVLSQSFLVWQLILSVVI 201

Query: 28  LGRKYSLRQ 2
           LGRKY   Q
Sbjct: 202 LGRKYRANQ 210


>gb|EEC69365.1| hypothetical protein OsI_38489 [Oryza sativa Indica Group]
          Length = 343

 Score =  186 bits (473), Expect = 4e-45
 Identities = 90/123 (73%), Positives = 106/123 (86%)
 Frame = -1

Query: 370 VVVGSAITVVFAVLNRVLYKLALVPMKEYPFFLAQVTTFGYVAIYFSILFVRYSAGIVTN 191
           +   SA  V  AV NRVLYKLALVP+K+YPFFLAQ+TTFGYVA+YFSIL+ RY AG+VT 
Sbjct: 7   IAAASAAVVALAVANRVLYKLALVPLKQYPFFLAQLTTFGYVAVYFSILYARYRAGVVTG 66

Query: 190 EMLSLPKGCFVLIGILEALGVAAGMSSGAMLPGPAIPILSQTFLVWQLLFSMLILGRKYS 11
           +ML+LPK  F  IG+LEALG+AAGMS+GAMLPGPAIPILSQ+FLVWQL+FS L+LGR YS
Sbjct: 67  DMLALPKRRFAAIGLLEALGLAAGMSAGAMLPGPAIPILSQSFLVWQLIFSALLLGRTYS 126

Query: 10  LRQ 2
           +RQ
Sbjct: 127 MRQ 129


>gb|AAO64175.1| unknown protein [Arabidopsis thaliana] gi|110737187|dbj|BAF00542.1|
           hypothetical protein [Arabidopsis thaliana]
          Length = 266

 Score =  186 bits (472), Expect = 5e-45
 Identities = 102/188 (54%), Positives = 131/188 (69%), Gaps = 1/188 (0%)
 Frame = -1

Query: 562 ISIKPPQNPSFSSRTSLMTPFNGDSRVYSR-KSYFQRDIERQQPDFKLHCSSEESGISTG 386
           +S +  Q  S+ S T +   F   S + SR  S  +     ++P F +  S+EES I + 
Sbjct: 31  VSCRSSQLFSYRSTTMMSMCFLRRSDLRSRFLSTPKTTSPMRRPRFSVGASTEESSIPSN 90

Query: 385 RNNGQVVVGSAITVVFAVLNRVLYKLALVPMKEYPFFLAQVTTFGYVAIYFSILFVRYSA 206
           RN   +V  S + V  AV NRVLYKLALVPMK+YPFF+AQ+TTFGYV IYF+IL+ R   
Sbjct: 91  RN--LIVANSVVIVALAVANRVLYKLALVPMKQYPFFMAQLTTFGYVLIYFTILYTRRRL 148

Query: 205 GIVTNEMLSLPKGCFVLIGILEALGVAAGMSSGAMLPGPAIPILSQTFLVWQLLFSMLIL 26
           GIVTNEM+ +PK  F +IG LEALGVA GM++ AMLPGP IPIL+QT+LVWQLLF++LIL
Sbjct: 149 GIVTNEMMDVPKWRFAIIGFLEALGVATGMAAAAMLPGPVIPILNQTYLVWQLLFALLIL 208

Query: 25  GRKYSLRQ 2
           GR++ L Q
Sbjct: 209 GRRFLLNQ 216


Top