BLASTX nr result

ID: Cimicifuga21_contig00016414 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00016414
         (1288 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002516164.1| DNA cross-link repair protein pso2/snm1, put...   420   e-115
ref|XP_002280362.2| PREDICTED: uncharacterized protein LOC100256...   415   e-113
emb|CBI20745.3| unnamed protein product [Vitis vinifera]              415   e-113
ref|XP_002309453.1| predicted protein [Populus trichocarpa] gi|2...   402   e-110
ref|XP_004141439.1| PREDICTED: uncharacterized protein LOC101218...   374   e-101

>ref|XP_002516164.1| DNA cross-link repair protein pso2/snm1, putative [Ricinus communis]
            gi|223544650|gb|EEF46166.1| DNA cross-link repair protein
            pso2/snm1, putative [Ricinus communis]
          Length = 737

 Score =  420 bits (1080), Expect = e-115
 Identities = 220/399 (55%), Positives = 273/399 (68%), Gaps = 31/399 (7%)
 Frame = -1

Query: 1105 KTGYLSNSIESRLLASRMNKXXXXXXXXXXDEGFIDFEPDTQLNDLIKLCSEPGDKENVN 926
            K GYL NSIES+L+ S ++            + F DFE D+ L+ LIKLC++  ++    
Sbjct: 123  KKGYLCNSIESKLIRSGVSDSVG--------DEFGDFEEDSDLDLLIKLCTDEMNQ---- 170

Query: 925  GADFPDGNGSVDGLVECPLCGIDISNLTEELRQVHTNDCLDKND--VQQID-PFNDDTRH 755
                P G    D LV+CPLCGIDISNL+EE R VHTNDCLDK D  +Q++    ND+  H
Sbjct: 171  ---VPSGVADGDCLVQCPLCGIDISNLSEESRLVHTNDCLDKQDNHLQEVTCGSNDEGTH 227

Query: 754  RSPQ-------RGADVTPVLEWLRHLDLSKYEEAFVREEVDWVTLQWLTEEDLFSIGVTT 596
             +PQ       +  DV+PVL+WLR+L L +Y +AF+REE+DW +L+WLTEEDLFSIGVT 
Sbjct: 228  FAPQVVGDSGHKVVDVSPVLQWLRNLGLERYGDAFIREEIDWDSLKWLTEEDLFSIGVTA 287

Query: 595  LGPRKKMIHACNEFRRG--------------------NTHANHGNAGASKVGTNETKRLP 476
            LGPRKK++HA  E R+G                    +THA      ASKV  +ET +  
Sbjct: 288  LGPRKKIVHALAELRKGCNLVDETHRDPNASADVGSLSTHAAEMQMEASKVSGDETSKQT 347

Query: 475  GNKLITEFFPGS-SVVNRSRERPRSLEEQGPERRDRGSARKRDTSRNCARKGKSKDIPPW 299
             NKLIT++FPGS SV  R +    + E++GP +    S  KR    +  + GK KDIP W
Sbjct: 348  ANKLITDYFPGSVSVTVREKGCSIAKEKRGPAKNRPDSVHKRMAKNHPVKNGKLKDIPLW 407

Query: 298  CCVPGTPFRVDAFRYIRGDCSHWFLTHFHMDHYQGLTRSFCHGKIYCSSITARLVNMKIG 119
            C +PGTPFRVDAF+Y+RGDCSHWFLTHFHMDHYQGLTRSFCHGKIYCS ITARLVNMKIG
Sbjct: 408  CSIPGTPFRVDAFKYLRGDCSHWFLTHFHMDHYQGLTRSFCHGKIYCSLITARLVNMKIG 467

Query: 118  IPWDKLQVLPLNEQVSIAGINVICLDANHCPGSIIILFE 2
            IPWD+LQVLPLN+++SIAG++V CLDANHCPGSII+LFE
Sbjct: 468  IPWDRLQVLPLNKKISIAGVDVTCLDANHCPGSIIVLFE 506


>ref|XP_002280362.2| PREDICTED: uncharacterized protein LOC100256089 [Vitis vinifera]
          Length = 842

 Score =  415 bits (1067), Expect = e-113
 Identities = 217/399 (54%), Positives = 273/399 (68%), Gaps = 34/399 (8%)
 Frame = -1

Query: 1096 YLSNSIESRLLASRMNKXXXXXXXXXXDEGFIDFEPDTQLNDLIKLCSEPGDKENVNGAD 917
            Y  NS+ESRLL SR             +E   DFE   QL+ LI+LCSE  ++ + +G  
Sbjct: 218  YSCNSVESRLLKSRSG-GDGDGNGGFCEESDEDFE---QLDVLIRLCSEGEEEPDSDGFR 273

Query: 916  FPDGNGSVD---GLVECPLCGIDISNLTEELRQVHTNDCLDKNDVQQI-----------D 779
            F +  GS     GLV CPLC IDIS+L +ELRQVHTN CLD+ +   +            
Sbjct: 274  FREQRGSGSEGRGLVRCPLCEIDISDLNDELRQVHTNGCLDRLEADNVLRNGDRECQFPQ 333

Query: 778  PFNDDTRHRSPQRGADVTPVLEWLRHLDLSKYEEAFVREEVDWVTLQWLTEEDLFSIGVT 599
            PFND +  ++ Q+  DV+PV+ W+  L L +YEEAF+REE+DW TLQ LTEEDL +IGVT
Sbjct: 334  PFNDGSPVQTHQKVVDVSPVIGWIHSLGLGRYEEAFIREEIDWDTLQRLTEEDLLNIGVT 393

Query: 598  TLGPRKKMIHACNEFRRGNTH-----------------ANHG---NAGASKVGTNETKRL 479
             LGPRK+++HA +E R+G+TH                 + HG    A ASK   +ET +L
Sbjct: 394  ALGPRKRIVHALSELRKGSTHTVDIHTHVPALSELRKQSTHGVEIEADASKATVDETSKL 453

Query: 478  PGNKLITEFFPGSSVVNRSRERPRSLEEQGPERRDRGSARKRDTSRNCARKGKSKDIPPW 299
              NKLIT++FPGS V +RSR    S E +  E+   GS+RK+   +N AR GK +D+P W
Sbjct: 454  AANKLITDYFPGS-VTDRSRGCISSGERKAAEKIQLGSSRKQVVVKNHARSGKLRDLPLW 512

Query: 298  CCVPGTPFRVDAFRYIRGDCSHWFLTHFHMDHYQGLTRSFCHGKIYCSSITARLVNMKIG 119
            CC+PGTPFRVDAFRY+R DCSHWFLTHFH+DHYQGLTRSFCHGKIYCS+ITARLVNMKIG
Sbjct: 513  CCIPGTPFRVDAFRYLRRDCSHWFLTHFHLDHYQGLTRSFCHGKIYCSAITARLVNMKIG 572

Query: 118  IPWDKLQVLPLNEQVSIAGINVICLDANHCPGSIIILFE 2
            IPWD+LQ+LPLN++++I G++V CLDANHCPGSIIILFE
Sbjct: 573  IPWDRLQILPLNQKINIDGVDVTCLDANHCPGSIIILFE 611


>emb|CBI20745.3| unnamed protein product [Vitis vinifera]
          Length = 723

 Score =  415 bits (1067), Expect = e-113
 Identities = 217/399 (54%), Positives = 273/399 (68%), Gaps = 34/399 (8%)
 Frame = -1

Query: 1096 YLSNSIESRLLASRMNKXXXXXXXXXXDEGFIDFEPDTQLNDLIKLCSEPGDKENVNGAD 917
            Y  NS+ESRLL SR             +E   DFE   QL+ LI+LCSE  ++ + +G  
Sbjct: 99   YSCNSVESRLLKSRSG-GDGDGNGGFCEESDEDFE---QLDVLIRLCSEGEEEPDSDGFR 154

Query: 916  FPDGNGSVD---GLVECPLCGIDISNLTEELRQVHTNDCLDKNDVQQI-----------D 779
            F +  GS     GLV CPLC IDIS+L +ELRQVHTN CLD+ +   +            
Sbjct: 155  FREQRGSGSEGRGLVRCPLCEIDISDLNDELRQVHTNGCLDRLEADNVLRNGDRECQFPQ 214

Query: 778  PFNDDTRHRSPQRGADVTPVLEWLRHLDLSKYEEAFVREEVDWVTLQWLTEEDLFSIGVT 599
            PFND +  ++ Q+  DV+PV+ W+  L L +YEEAF+REE+DW TLQ LTEEDL +IGVT
Sbjct: 215  PFNDGSPVQTHQKVVDVSPVIGWIHSLGLGRYEEAFIREEIDWDTLQRLTEEDLLNIGVT 274

Query: 598  TLGPRKKMIHACNEFRRGNTH-----------------ANHG---NAGASKVGTNETKRL 479
             LGPRK+++HA +E R+G+TH                 + HG    A ASK   +ET +L
Sbjct: 275  ALGPRKRIVHALSELRKGSTHTVDIHTHVPALSELRKQSTHGVEIEADASKATVDETSKL 334

Query: 478  PGNKLITEFFPGSSVVNRSRERPRSLEEQGPERRDRGSARKRDTSRNCARKGKSKDIPPW 299
              NKLIT++FPGS V +RSR    S E +  E+   GS+RK+   +N AR GK +D+P W
Sbjct: 335  AANKLITDYFPGS-VTDRSRGCISSGERKAAEKIQLGSSRKQVVVKNHARSGKLRDLPLW 393

Query: 298  CCVPGTPFRVDAFRYIRGDCSHWFLTHFHMDHYQGLTRSFCHGKIYCSSITARLVNMKIG 119
            CC+PGTPFRVDAFRY+R DCSHWFLTHFH+DHYQGLTRSFCHGKIYCS+ITARLVNMKIG
Sbjct: 394  CCIPGTPFRVDAFRYLRRDCSHWFLTHFHLDHYQGLTRSFCHGKIYCSAITARLVNMKIG 453

Query: 118  IPWDKLQVLPLNEQVSIAGINVICLDANHCPGSIIILFE 2
            IPWD+LQ+LPLN++++I G++V CLDANHCPGSIIILFE
Sbjct: 454  IPWDRLQILPLNQKINIDGVDVTCLDANHCPGSIIILFE 492


>ref|XP_002309453.1| predicted protein [Populus trichocarpa] gi|222855429|gb|EEE92976.1|
            predicted protein [Populus trichocarpa]
          Length = 740

 Score =  402 bits (1034), Expect = e-110
 Identities = 217/420 (51%), Positives = 274/420 (65%), Gaps = 32/420 (7%)
 Frame = -1

Query: 1165 SSCWSECVPSECNEKIGFKLKTGYLSNSIESRLLASRMNKXXXXXXXXXXDEGFIDFEPD 986
            S   +E   S   +K   ++  GYL NSIE+RL+ SR++                DFE +
Sbjct: 99   SKVGNEKFDSGSGKKEKLEVSGGYLCNSIEARLMKSRVDYSGVNVGNEE------DFEEN 152

Query: 985  TQLNDLIKLCSEPGDKENVNGADFPDGNGSVDGLVECPLCGIDISNLTEELRQVHTNDCL 806
            ++L+ LIKLC+E  + E        + NG     V CPLCG DIS+L+EE R VHTN+CL
Sbjct: 153  SELDALIKLCTEEEESEAREKIKV-NCNGDECCFVLCPLCGTDISDLSEEFRLVHTNECL 211

Query: 805  DK--NDVQQIDPFNDDTRHRSPQRGAD----------VTPVLEWLRHLDLSKYEEAFVRE 662
            DK  N V  +    DD R     RG +          V+PV++WLR+L L +YEE FVRE
Sbjct: 212  DKEENSVTYVVLGGDDGRPEVVPRGVEGPVCGPKKVVVSPVVKWLRNLGLERYEEDFVRE 271

Query: 661  EVDWVTLQWLTEEDLFSIGVTTLGPRKKMIHACNEFRRGNTHA--NHGNAGA-------- 512
            E+DW TLQWLTEEDLF IGVT LGPRKK++HA +E R+G+ HA   HG+A A        
Sbjct: 272  EIDWETLQWLTEEDLFGIGVTALGPRKKIVHALSELRKGSNHAIEAHGDAHAFGEVGSRR 331

Query: 511  ----------SKVGTNETKRLPGNKLITEFFPGSSVVNRSRERPRSLEEQGPERRDRGSA 362
                      SK+  ++T +   NKLIT++FPGS  + + +    S E++G E+   G  
Sbjct: 332  SHGAEMQVEASKIIGDDTSKPTANKLITDYFPGSVPIKK-KTSVISKEQRGAEKSQPGYV 390

Query: 361  RKRDTSRNCARKGKSKDIPPWCCVPGTPFRVDAFRYIRGDCSHWFLTHFHMDHYQGLTRS 182
            RK+   +N  +KGK KDIP WC +PGTPFRVDAF+Y+RGDCSHWFLTHFHMDHYQGLTRS
Sbjct: 391  RKQGV-KNYTKKGKFKDIPLWCSIPGTPFRVDAFKYLRGDCSHWFLTHFHMDHYQGLTRS 449

Query: 181  FCHGKIYCSSITARLVNMKIGIPWDKLQVLPLNEQVSIAGINVICLDANHCPGSIIILFE 2
            FCHGKIYCS ITA+LVN+KIGIPWD L VLPLN+++ IAG++V CLDANHCPGSIIILFE
Sbjct: 450  FCHGKIYCSLITAKLVNLKIGIPWDSLHVLPLNQKICIAGVDVTCLDANHCPGSIIILFE 509


>ref|XP_004141439.1| PREDICTED: uncharacterized protein LOC101218609 [Cucumis sativus]
          Length = 774

 Score =  374 bits (961), Expect = e-101
 Identities = 196/396 (49%), Positives = 261/396 (65%), Gaps = 24/396 (6%)
 Frame = -1

Query: 1117 GFKLKTGYLSNSIESRLLASRMNKXXXXXXXXXXDEGFIDFEPDTQLNDLIKLCSEPGDK 938
            G K K GYL NSIESRL+ SR++                DFE DT+L+ L+ L SE  ++
Sbjct: 149  GSKGKGGYLVNSIESRLVNSRVDYDIGVSGSGDDKVSGDDFESDTELDLLLNLHSELDEE 208

Query: 937  ENVN----GADFPDGNGSVDGLVECPLCGIDISNLTEELRQVHTNDCLDKNDVQ-QIDPF 773
            + +N    G +  D     +GL++CPLCG+DIS+L++E R VHTNDC+DK D + Q    
Sbjct: 209  DGINREGFGIEATDFMLDEEGLIQCPLCGVDISDLSDEQRLVHTNDCIDKVDAEAQNVAL 268

Query: 772  NDDTRHRSPQRGAD---VTPVLEWLRHLDLSKYEEAFVREEVDWVTLQWLTEEDLFSIGV 602
              D +  S  R +D    + VL+WL  L LSKYE  FVREEVDW TLQWLT+EDL ++G+
Sbjct: 269  TPDKKQTSGPRQSDNSKFSTVLKWLHDLGLSKYEGLFVREEVDWDTLQWLTDEDLNNMGI 328

Query: 601  TTLGPRKKMIHACNEFRRGNT----------------HANHGNAGASKVGTNETKRLPGN 470
            T LGPR+K+ HA +E R+ ++                 +N+G+ G     TN T + P N
Sbjct: 329  TALGPRRKITHALSELRKESSLVETSTNSRAYSSTGQQSNNGSDGREG-STNGTNKTPPN 387

Query: 469  KLITEFFPGSSVVNRSRERPRSLEEQGPERRDRGSARKRDTSRNCARKGKSKDIPPWCCV 290
            KLIT++FPG +  N+      S  ++   ++   S  K  T++   R  K  ++P W C+
Sbjct: 388  KLITDYFPGFAT-NKKNPCSSSSVQKDVGKKIPDSLNKGKTAKRNVRNRKLGNVPVWSCI 446

Query: 289  PGTPFRVDAFRYIRGDCSHWFLTHFHMDHYQGLTRSFCHGKIYCSSITARLVNMKIGIPW 110
            PGTPFRVDAFR++RGDC HWFLTHFHMDHYQGLT+SFCHG IYCS+ITA+LVNMKIGIPW
Sbjct: 447  PGTPFRVDAFRHLRGDCFHWFLTHFHMDHYQGLTKSFCHGMIYCSTITAKLVNMKIGIPW 506

Query: 109  DKLQVLPLNEQVSIAGINVICLDANHCPGSIIILFE 2
            ++LQVLPL+++++IAG++V C DANHCPGSIIILFE
Sbjct: 507  ERLQVLPLDQKINIAGVDVTCFDANHCPGSIIILFE 542


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