BLASTX nr result

ID: Cimicifuga21_contig00016411 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00016411
         (465 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI16359.3| unnamed protein product [Vitis vinifera]              119   3e-25
ref|XP_002282734.1| PREDICTED: uncharacterized protein LOC100260...   119   3e-25
ref|XP_002978945.1| hypothetical protein SELMODRAFT_444069 [Sela...    73   2e-11
ref|XP_002986461.1| hypothetical protein SELMODRAFT_425401 [Sela...    72   4e-11
ref|XP_001765314.1| predicted protein [Physcomitrella patens sub...    69   3e-10

>emb|CBI16359.3| unnamed protein product [Vitis vinifera]
          Length = 492

 Score =  119 bits (298), Expect = 3e-25
 Identities = 58/97 (59%), Positives = 76/97 (78%)
 Frame = +1

Query: 1   RKPVPSFQKVLLNESEFETIVGKRVKVYWSGSRRWFVGRIMSFDNKKQQHRILYDDGDKE 180
           RK VP+F+KV L E++ E IVGKRVK+YWSGSRRWFVGR+ +FD+ K+ H I Y+DG+KE
Sbjct: 120 RKDVPTFRKVELAENDSERIVGKRVKIYWSGSRRWFVGRVKAFDHDKRCHTIHYEDGEKE 179

Query: 181 DLDLKRERFELEMMRGEAFNICSKSGPDLEKKVISSD 291
           DLDL++ERFELE+  G+ FN+  +  P  EKKV + D
Sbjct: 180 DLDLRQERFELEVFPGDGFNLIVE--PKSEKKVKAWD 214



 Score = 78.2 bits (191), Expect = 7e-13
 Identities = 37/65 (56%), Positives = 48/65 (73%)
 Frame = +1

Query: 271 KKVISSDEDIAAALISSPGKVSSKLRPRKPVPSFQKVVLNENEFEMIVGKRVRVYWPDSR 450
           K+   +D +I  A +SS  + SS+LRPRK VP+F+KV L EN+ E IVGKRV++YW  SR
Sbjct: 93  KRKRGADGEIVQAFLSSTERSSSRLRPRKDVPTFRKVELAENDSERIVGKRVKIYWSGSR 152

Query: 451 RWFVG 465
           RWFVG
Sbjct: 153 RWFVG 157


>ref|XP_002282734.1| PREDICTED: uncharacterized protein LOC100260425 [Vitis vinifera]
          Length = 494

 Score =  119 bits (298), Expect = 3e-25
 Identities = 58/97 (59%), Positives = 76/97 (78%)
 Frame = +1

Query: 1   RKPVPSFQKVLLNESEFETIVGKRVKVYWSGSRRWFVGRIMSFDNKKQQHRILYDDGDKE 180
           RK VP+F+KV L E++ E IVGKRVK+YWSGSRRWFVGR+ +FD+ K+ H I Y+DG+KE
Sbjct: 122 RKDVPTFRKVELAENDSERIVGKRVKIYWSGSRRWFVGRVKAFDHDKRCHTIHYEDGEKE 181

Query: 181 DLDLKRERFELEMMRGEAFNICSKSGPDLEKKVISSD 291
           DLDL++ERFELE+  G+ FN+  +  P  EKKV + D
Sbjct: 182 DLDLRQERFELEVFPGDGFNLIVE--PKSEKKVKAWD 216



 Score = 78.2 bits (191), Expect = 7e-13
 Identities = 37/65 (56%), Positives = 48/65 (73%)
 Frame = +1

Query: 271 KKVISSDEDIAAALISSPGKVSSKLRPRKPVPSFQKVVLNENEFEMIVGKRVRVYWPDSR 450
           K+   +D +I  A +SS  + SS+LRPRK VP+F+KV L EN+ E IVGKRV++YW  SR
Sbjct: 95  KRKRGADGEIVQAFLSSTERSSSRLRPRKDVPTFRKVELAENDSERIVGKRVKIYWSGSR 154

Query: 451 RWFVG 465
           RWFVG
Sbjct: 155 RWFVG 159


>ref|XP_002978945.1| hypothetical protein SELMODRAFT_444069 [Selaginella moellendorffii]
           gi|300153263|gb|EFJ19902.1| hypothetical protein
           SELMODRAFT_444069 [Selaginella moellendorffii]
          Length = 1328

 Score = 73.2 bits (178), Expect = 2e-11
 Identities = 32/109 (29%), Positives = 64/109 (58%), Gaps = 7/109 (6%)
 Frame = +1

Query: 19  FQKVLLNESEFETIVGKRVKVYWSGSRRWFVGRIMSFDNKKQQHRILYDDGDKEDLDLKR 198
           +  V L E +   ++G R+K++W   +RW++G I ++D++ +QH I+YDDGDKE + L+ 
Sbjct: 135 YYDVHLTEDDATKLLGHRIKMWWPLDKRWYLGEIKNYDSELRQHWIVYDDGDKEWVKLEE 194

Query: 199 ERFELEMMRGEAFNICSKS-------GPDLEKKVISSDEDIAAALISSP 324
           E F L+++ G++F   +K          + +++ +    D+ + L+  P
Sbjct: 195 ENFRLQLLPGDSFERAAKPRSSTYCLNSEKDEEDVDITADVCSRLVEQP 243


>ref|XP_002986461.1| hypothetical protein SELMODRAFT_425401 [Selaginella moellendorffii]
           gi|300145644|gb|EFJ12318.1| hypothetical protein
           SELMODRAFT_425401 [Selaginella moellendorffii]
          Length = 1329

 Score = 72.4 bits (176), Expect = 4e-11
 Identities = 32/109 (29%), Positives = 64/109 (58%), Gaps = 7/109 (6%)
 Frame = +1

Query: 19  FQKVLLNESEFETIVGKRVKVYWSGSRRWFVGRIMSFDNKKQQHRILYDDGDKEDLDLKR 198
           +  V L E +   ++G R+K++W   +RW++G I ++D++ +QH I+YDDGDKE + L+ 
Sbjct: 136 YYDVHLTEDDAIKLLGHRIKMWWPLDKRWYLGEIKNYDSELRQHWIVYDDGDKEWVKLEE 195

Query: 199 ERFELEMMRGEAFNICSKS-------GPDLEKKVISSDEDIAAALISSP 324
           E F L+++ G++F   +K          + +++ +    D+ + L+  P
Sbjct: 196 ENFRLQLLPGDSFERAAKPRSSTYCLNSEKDEEDVDITADVCSRLVEQP 244


>ref|XP_001765314.1| predicted protein [Physcomitrella patens subsp. patens]
           gi|162683367|gb|EDQ69777.1| predicted protein
           [Physcomitrella patens subsp. patens]
          Length = 1939

 Score = 69.3 bits (168), Expect = 3e-10
 Identities = 40/128 (31%), Positives = 70/128 (54%), Gaps = 1/128 (0%)
 Frame = +1

Query: 22  QKVLLNESEFETIVGKRVKVYWSGSRRWFVGRIMSFDNKKQQHRILYDDGDKEDLDLKRE 201
           Q+V L+ES+   I+G+R+K++W    RWF G + +++  ++ H+I+YDD ++E + L  E
Sbjct: 355 QEVPLSESDGPRILGRRIKIFWRDENRWFYGVVKAYNRGRRSHKIVYDDKEEEWVKLHEE 414

Query: 202 RFELEMMRGEAFNICSKSGPDLEKKVISSDEDIAAALISSPGKVSSKLRPRKPVPSFQK- 378
            F+L+++ GE F                 ++  AAA  + P +V+S     K V S +K 
Sbjct: 415 IFKLQVLEGEVF----------------GEQQQAAAAAAQPAQVASIF--AKNVSSIEKG 456

Query: 379 VVLNENEF 402
             +N  EF
Sbjct: 457 RNMNHQEF 464


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