BLASTX nr result

ID: Cimicifuga21_contig00016390 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00016390
         (752 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004135834.1| PREDICTED: probable histone H2A variant 3-li...   214   2e-53
dbj|BAJ87489.1| predicted protein [Hordeum vulgare subsp. vulgare]    214   2e-53
ref|NP_001237008.1| uncharacterized protein LOC100306322 [Glycin...   214   2e-53
gb|ABK22002.1| unknown [Picea sitchensis]                             214   2e-53
ref|NP_001049049.1| Os03g0162200 [Oryza sativa Japonica Group] g...   213   3e-53

>ref|XP_004135834.1| PREDICTED: probable histone H2A variant 3-like [Cucumis sativus]
           gi|449519192|ref|XP_004166619.1| PREDICTED: probable
           histone H2A variant 3-like [Cucumis sativus]
          Length = 134

 Score =  214 bits (545), Expect = 2e-53
 Identities = 110/118 (93%), Positives = 116/118 (98%)
 Frame = +3

Query: 177 SKDKDNKKRPVSRSSRAGLQFPVGRIHRHLKSRIAANGRVGATAAVYSAAILEYLTAEVL 356
           +KDKD KK+PVSRSSRAGLQFPVGR+HR LKSR+AANGRVGATAAVY+AAILEYLTAEVL
Sbjct: 18  NKDKD-KKKPVSRSSRAGLQFPVGRVHRQLKSRVAANGRVGATAAVYTAAILEYLTAEVL 76

Query: 357 ELAGNASKDLKVKRITPRHLQLAIRGDEELDTLIKGTIAGGGVIPHIHKSLINKSTKE 530
           ELAGNASKDLKVKRITPRHLQLAIRGDEELDTLIKGTIAGGGVIPHIHKSLINKS+KE
Sbjct: 77  ELAGNASKDLKVKRITPRHLQLAIRGDEELDTLIKGTIAGGGVIPHIHKSLINKSSKE 134


>dbj|BAJ87489.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 139

 Score =  214 bits (545), Expect = 2e-53
 Identities = 108/117 (92%), Positives = 113/117 (96%)
 Frame = +3

Query: 180 KDKDNKKRPVSRSSRAGLQFPVGRIHRHLKSRIAANGRVGATAAVYSAAILEYLTAEVLE 359
           KDKD KK PVSRSSRAG+QFPVGRIHR LK R++ANGRVGATAAVYSAAILEYLTAEVLE
Sbjct: 23  KDKDKKKAPVSRSSRAGIQFPVGRIHRQLKQRVSANGRVGATAAVYSAAILEYLTAEVLE 82

Query: 360 LAGNASKDLKVKRITPRHLQLAIRGDEELDTLIKGTIAGGGVIPHIHKSLINKSTKE 530
           LAGNASKDLKVKRITPRHLQLAIRGDEELDTLIKGTIAGGGVIPHIHKSLINK++KE
Sbjct: 83  LAGNASKDLKVKRITPRHLQLAIRGDEELDTLIKGTIAGGGVIPHIHKSLINKTSKE 139


>ref|NP_001237008.1| uncharacterized protein LOC100306322 [Glycine max]
           gi|255628199|gb|ACU14444.1| unknown [Glycine max]
          Length = 136

 Score =  214 bits (544), Expect = 2e-53
 Identities = 111/119 (93%), Positives = 117/119 (98%), Gaps = 1/119 (0%)
 Frame = +3

Query: 177 SKDKD-NKKRPVSRSSRAGLQFPVGRIHRHLKSRIAANGRVGATAAVYSAAILEYLTAEV 353
           +KDKD +KK+PVSRSSRAGLQFPVGRIHR LKSR++ANGRVGATAAVYSAAILEYLTAEV
Sbjct: 18  AKDKDKDKKKPVSRSSRAGLQFPVGRIHRLLKSRVSANGRVGATAAVYSAAILEYLTAEV 77

Query: 354 LELAGNASKDLKVKRITPRHLQLAIRGDEELDTLIKGTIAGGGVIPHIHKSLINKSTKE 530
           LELAGNASKDLKVKRITPRHLQLAIRGDEELDTLIKGTIAGGGVIPHIHKSLINKS+KE
Sbjct: 78  LELAGNASKDLKVKRITPRHLQLAIRGDEELDTLIKGTIAGGGVIPHIHKSLINKSSKE 136


>gb|ABK22002.1| unknown [Picea sitchensis]
          Length = 145

 Score =  214 bits (544), Expect = 2e-53
 Identities = 112/118 (94%), Positives = 116/118 (98%)
 Frame = +3

Query: 177 SKDKDNKKRPVSRSSRAGLQFPVGRIHRHLKSRIAANGRVGATAAVYSAAILEYLTAEVL 356
           SKDKD KK+PVSRSSRAGLQFPVGRIHR LKSRI+ANGRVGATAAVYSAAILEYLTAEVL
Sbjct: 29  SKDKD-KKKPVSRSSRAGLQFPVGRIHRLLKSRISANGRVGATAAVYSAAILEYLTAEVL 87

Query: 357 ELAGNASKDLKVKRITPRHLQLAIRGDEELDTLIKGTIAGGGVIPHIHKSLINKSTKE 530
           ELAGNASKDLKVKRITPRHLQLAIRGDEELDTLIKGTIAGGGVIPHIHKSLINKS+K+
Sbjct: 88  ELAGNASKDLKVKRITPRHLQLAIRGDEELDTLIKGTIAGGGVIPHIHKSLINKSSKD 145


>ref|NP_001049049.1| Os03g0162200 [Oryza sativa Japonica Group]
           gi|75299926|sp|Q8H7Y8.1|H2AV1_ORYSJ RecName:
           Full=Probable histone H2A variant 1
           gi|22773254|gb|AAN06860.1| Putative histone H2A [Oryza
           sativa Japonica Group] gi|108706326|gb|ABF94121.1|
           Histone H2A.Z, putative, expressed [Oryza sativa
           Japonica Group] gi|113547520|dbj|BAF10963.1|
           Os03g0162200 [Oryza sativa Japonica Group]
           gi|125542513|gb|EAY88652.1| hypothetical protein
           OsI_10126 [Oryza sativa Indica Group]
           gi|125585016|gb|EAZ25680.1| hypothetical protein
           OsJ_09510 [Oryza sativa Japonica Group]
           gi|215692615|dbj|BAG88035.1| unnamed protein product
           [Oryza sativa Japonica Group]
           gi|215768310|dbj|BAH00539.1| unnamed protein product
           [Oryza sativa Japonica Group]
          Length = 138

 Score =  213 bits (542), Expect = 3e-53
 Identities = 109/117 (93%), Positives = 113/117 (96%)
 Frame = +3

Query: 180 KDKDNKKRPVSRSSRAGLQFPVGRIHRHLKSRIAANGRVGATAAVYSAAILEYLTAEVLE 359
           KDKD KK PVSRSSRAGLQFPVGRIHR LKSR +A+GRVGATAAVYSAAILEYLTAEVLE
Sbjct: 22  KDKDKKKAPVSRSSRAGLQFPVGRIHRQLKSRASAHGRVGATAAVYSAAILEYLTAEVLE 81

Query: 360 LAGNASKDLKVKRITPRHLQLAIRGDEELDTLIKGTIAGGGVIPHIHKSLINKSTKE 530
           LAGNASKDLKVKRITPRHLQLAIRGDEELDTLIKGTIAGGGVIPHIHKSLINK++KE
Sbjct: 82  LAGNASKDLKVKRITPRHLQLAIRGDEELDTLIKGTIAGGGVIPHIHKSLINKTSKE 138


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