BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00016357
         (619 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAC67200.1| putative retroelement pol polyprotein [Arabidopsi...   215   6e-54
emb|CCH50966.1| T4.5 [Malus x robusta]                                207   2e-51
gb|AAD21687.1| Strong similarity to gi|3600044 T12H20.12 proteas...   206   3e-51
gb|AAK51235.1|AF287471_1 polyprotein [Arabidopsis thaliana]           206   3e-51
emb|CAN78447.1| hypothetical protein VITISV_026810 [Vitis vinifera]   205   6e-51

>gb|AAC67200.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
          Length = 1402

 Score =  215 bits (547), Expect = 6e-54
 Identities = 99/193 (51%), Positives = 133/193 (68%)
 Frame = +3

Query: 39   EKASVSTWHDRVGHPSSIILRKILQENQLKVFDNNQAASICSPCQLGKSRKLPFTNSSSR 218
            + AS   WH R+GHP   +L+++++ N + +  N  + S+C  CQLGKS +LPF +SS  
Sbjct: 460  QSASDEVWHRRLGHPHPQVLQQLVKTNSISI--NKTSKSLCEACQLGKSTRLPFVSSSFT 517

Query: 219  AQFPLQLIHTDLWGPSSVSSVAGFRFYVSFIDDWSRYCWIYPLCKKSDFHNVFVTFRTTT 398
            +  PL+ +H DLWGPS ++SV GFR+Y  FID +SR+ WIYPL  KSDF+N+FV F    
Sbjct: 518  SNRPLERVHCDLWGPSPITSVQGFRYYAVFIDHYSRFSWIYPLKLKSDFYNIFVAFHKLV 577

Query: 399  ENQLNHKIKVIRSDNGGEFVSTKFENYLLSVGITHQYSCPHTPEQNGLAERKHRHILELS 578
            ENQLNHKI V + D GGEFV+ KF  +L + GI    S PHTP+QNGLAERKHRH++EL 
Sbjct: 578  ENQLNHKISVFQCDGGGEFVNHKFLQHLQNHGIQQHISYPHTPQQNGLAERKHRHLVELG 637

Query: 579  RTLFAQSHLPFHF 617
             ++  QS +P  F
Sbjct: 638  LSMLFQSKVPLKF 650


>emb|CCH50966.1| T4.5 [Malus x robusta]
          Length = 1670

 Score =  207 bits (526), Expect = 2e-51
 Identities = 97/203 (47%), Positives = 134/203 (66%)
 Frame = +3

Query: 9    ILIAPTALIGEKASVSTWHDRVGHPSSIILRKILQENQLKVFDNNQAASICSPCQLGKSR 188
            I I+PTAL+  KA + TWH R+GHPS   L  ++ +N L V       S+C+ CQLGKS 
Sbjct: 715  IAISPTALMIAKADIHTWHRRLGHPSGGTLHSVVHKNHLPVIGYVNNMSVCTACQLGKSY 774

Query: 189  KLPFTNSSSRAQFPLQLIHTDLWGPSSVSSVAGFRFYVSFIDDWSRYCWIYPLCKKSDFH 368
            +L F+     +  PLQL+HTD+WGPS  SS  G+RFY+  +DD+++Y W+YPL  KSD  
Sbjct: 775  RLSFSTLPCTSSRPLQLLHTDVWGPSPTSSCTGYRFYLIIVDDFTKYSWLYPLHFKSDVF 834

Query: 369  NVFVTFRTTTENQLNHKIKVIRSDNGGEFVSTKFENYLLSVGITHQYSCPHTPEQNGLAE 548
            +   TF    +  L+ +++ IRSD+GGEF++   +++    GITHQ SC HT EQNG AE
Sbjct: 835  STLKTFILKLQTLLDLQVQSIRSDSGGEFLNKSLQSFFNEQGITHQLSCLHTSEQNGCAE 894

Query: 549  RKHRHILELSRTLFAQSHLPFHF 617
            RKHRH++E+ RTL +QS LP  F
Sbjct: 895  RKHRHVVEMGRTLLSQSDLPTQF 917


>gb|AAD21687.1| Strong similarity to gi|3600044 T12H20.12 protease homolog from
            Arabidopsis thaliana BAC gb|AF080119 and is a member of
            the reverse transcriptase family PF|00078 [Arabidopsis
            thaliana]
          Length = 1415

 Score =  206 bits (523), Expect = 3e-51
 Identities = 95/191 (49%), Positives = 129/191 (67%)
 Frame = +3

Query: 45   ASVSTWHDRVGHPSSIILRKILQENQLKVFDNNQAASICSPCQLGKSRKLPFTNSSSRAQ 224
            A+   WH R+GH +S  L+ +     +++ + ++ + +C PCQ+GKS +LPF  S SR  
Sbjct: 451  ATEEVWHHRLGHANSKALQHLQNSKAIQI-NKSRTSPVCEPCQMGKSSRLPFLISDSRVL 509

Query: 225  FPLQLIHTDLWGPSSVSSVAGFRFYVSFIDDWSRYCWIYPLCKKSDFHNVFVTFRTTTEN 404
             PL  IH DLWGPS V S  G ++Y  F+DD+SRY W YPL  KS+F +VF++F+   EN
Sbjct: 510  HPLDRIHCDLWGPSPVVSNQGLKYYAIFVDDYSRYSWFYPLHNKSEFLSVFISFQKLVEN 569

Query: 405  QLNHKIKVIRSDNGGEFVSTKFENYLLSVGITHQYSCPHTPEQNGLAERKHRHILELSRT 584
            QLN KIKV +SD GGEFVS K + +L   GI H+ SCP+TP+QNGLAERKHRH++EL  +
Sbjct: 570  QLNTKIKVFQSDGGGEFVSNKLKTHLSEHGIHHRISCPYTPQQNGLAERKHRHLVELGLS 629

Query: 585  LFAQSHLPFHF 617
            +   SH P  F
Sbjct: 630  MLFHSHTPQKF 640


>gb|AAK51235.1|AF287471_1 polyprotein [Arabidopsis thaliana]
          Length = 1453

 Score =  206 bits (523), Expect = 3e-51
 Identities = 97/191 (50%), Positives = 127/191 (66%)
 Frame = +3

Query: 45   ASVSTWHDRVGHPSSIILRKILQENQLKVFDNNQAASICSPCQLGKSRKLPFTNSSSRAQ 224
            AS   WH R+GH +S IL+++    ++  F+ ++ + +C PCQ+GKS KL F +S+SR  
Sbjct: 454  ASEEIWHHRLGHSNSRILQQLKSSKEIS-FNKSRMSPVCEPCQMGKSSKLQFFSSNSREL 512

Query: 225  FPLQLIHTDLWGPSSVSSVAGFRFYVSFIDDWSRYCWIYPLCKKSDFHNVFVTFRTTTEN 404
              L  IH DLWGPS V S  GF++YV F+DD+SRY W YPL  KSDF  VFV F+   EN
Sbjct: 513  DLLGRIHCDLWGPSPVVSKQGFKYYVVFVDDYSRYSWFYPLKAKSDFFAVFVAFQNLVEN 572

Query: 405  QLNHKIKVIRSDNGGEFVSTKFENYLLSVGITHQYSCPHTPEQNGLAERKHRHILELSRT 584
            Q N KIKV +SD GGEF S   + +L   GI H+ SCP+TP+QNG+AERKHRH +EL  +
Sbjct: 573  QFNTKIKVFQSDGGGEFTSNLMKKHLTDCGIQHRISCPYTPQQNGIAERKHRHFVELGLS 632

Query: 585  LFAQSHLPFHF 617
            +   SH P  F
Sbjct: 633  MMFHSHTPLQF 643


>emb|CAN78447.1| hypothetical protein VITISV_026810 [Vitis vinifera]
          Length = 1171

 Score =  205 bits (521), Expect = 6e-51
 Identities = 96/191 (50%), Positives = 128/191 (67%)
 Frame = +3

Query: 33   IGEKASVSTWHDRVGHPSSIILRKILQENQLKVFDNNQAASICSPCQLGKSRKLPFTNSS 212
            IG +A+  TWH R+GHPSS+I   +   N+L V  ++     CS CQLGK+++LPF  SS
Sbjct: 451  IGVRANADTWHSRLGHPSSVIFNSLFHSNKLSVKGSSTKLEFCSACQLGKAKQLPFPESS 510

Query: 213  SRAQFPLQLIHTDLWGPSSVSSVAGFRFYVSFIDDWSRYCWIYPLCKKSDFHNVFVTFRT 392
             ++  PL LIH+D+W  S V S  G  +YV FIDD+SRY W+YPL +KSD    FV F+T
Sbjct: 511  RQSSVPLALIHSDVW-VSPVQSTGGCSYYVLFIDDYSRYSWLYPLHRKSDVFATFVKFKT 569

Query: 393  TTENQLNHKIKVIRSDNGGEFVSTKFENYLLSVGITHQYSCPHTPEQNGLAERKHRHILE 572
              E   +  IK I++DNGGEF S +F+ +L + GI H+ +CPHT +QNG+ ERKHRHI E
Sbjct: 570  IAEKLFSTSIKQIQTDNGGEFTSNQFKQFLTAQGIFHRLTCPHTSQQNGIVERKHRHIQE 629

Query: 573  LSRTLFAQSHL 605
            +  TL AQS L
Sbjct: 630  MGLTLLAQSSL 640