BLASTX nr result

ID: Cimicifuga21_contig00016351 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00016351
         (571 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002268068.2| PREDICTED: probable E3 ubiquitin-protein lig...    64   2e-08
emb|CBI38350.3| unnamed protein product [Vitis vinifera]               64   2e-08
emb|CAN83309.1| hypothetical protein VITISV_023021 [Vitis vinifera]    64   2e-08
ref|XP_002514795.1| Protein ariadne-1, putative [Ricinus communi...    62   9e-08
ref|XP_004172081.1| PREDICTED: probable E3 ubiquitin-protein lig...    61   1e-07

>ref|XP_002268068.2| PREDICTED: probable E3 ubiquitin-protein ligase ARI8-like [Vitis
           vinifera]
          Length = 652

 Score = 63.9 bits (154), Expect = 2e-08
 Identities = 34/66 (51%), Positives = 42/66 (63%), Gaps = 2/66 (3%)
 Frame = +1

Query: 4   SEDFTEFRIKLLDMTIVTRNFFDNLVRALENDLA--DDEGACSETSSGTPLSTDETERRP 177
           S+DF EFR KL  +T VTRN+F+NLVRALEN L+  D  GACS T+S   L    ++ R 
Sbjct: 547 SKDFNEFRTKLAGLTSVTRNYFENLVRALENGLSDVDSRGACSRTASSKSLGGGSSKARG 606

Query: 178 SGGAAT 195
             G  T
Sbjct: 607 GRGKGT 612


>emb|CBI38350.3| unnamed protein product [Vitis vinifera]
          Length = 581

 Score = 63.9 bits (154), Expect = 2e-08
 Identities = 34/66 (51%), Positives = 42/66 (63%), Gaps = 2/66 (3%)
 Frame = +1

Query: 4   SEDFTEFRIKLLDMTIVTRNFFDNLVRALENDLA--DDEGACSETSSGTPLSTDETERRP 177
           S+DF EFR KL  +T VTRN+F+NLVRALEN L+  D  GACS T+S   L    ++ R 
Sbjct: 476 SKDFNEFRTKLAGLTSVTRNYFENLVRALENGLSDVDSRGACSRTASSKSLGGGSSKARG 535

Query: 178 SGGAAT 195
             G  T
Sbjct: 536 GRGKGT 541


>emb|CAN83309.1| hypothetical protein VITISV_023021 [Vitis vinifera]
          Length = 588

 Score = 63.9 bits (154), Expect = 2e-08
 Identities = 34/66 (51%), Positives = 42/66 (63%), Gaps = 2/66 (3%)
 Frame = +1

Query: 4   SEDFTEFRIKLLDMTIVTRNFFDNLVRALENDLA--DDEGACSETSSGTPLSTDETERRP 177
           S+DF EFR KL  +T VTRN+F+NLVRALEN L+  D  GACS T+S   L    ++ R 
Sbjct: 483 SKDFNEFRTKLAGLTSVTRNYFENLVRALENGLSDVDSRGACSRTASSKSLGGGSSKARG 542

Query: 178 SGGAAT 195
             G  T
Sbjct: 543 GRGKGT 548


>ref|XP_002514795.1| Protein ariadne-1, putative [Ricinus communis]
           gi|223545846|gb|EEF47349.1| Protein ariadne-1, putative
           [Ricinus communis]
          Length = 513

 Score = 61.6 bits (148), Expect = 9e-08
 Identities = 33/63 (52%), Positives = 40/63 (63%), Gaps = 2/63 (3%)
 Frame = +1

Query: 4   SEDFTEFRIKLLDMTIVTRNFFDNLVRALENDLA--DDEGACSETSSGTPLSTDETERRP 177
           S+DF EFR KL  +T VTRN+F+NLVRALEN L+  D  GACS T+S   L    +  R 
Sbjct: 408 SKDFNEFRTKLAGLTSVTRNYFENLVRALENGLSDVDSHGACSRTASSKSLGGGSSRGRG 467

Query: 178 SGG 186
             G
Sbjct: 468 GRG 470


>ref|XP_004172081.1| PREDICTED: probable E3 ubiquitin-protein ligase ARI8-like [Cucumis
           sativus]
          Length = 194

 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 37/71 (52%), Positives = 44/71 (61%), Gaps = 2/71 (2%)
 Frame = +1

Query: 4   SEDFTEFRIKLLDMTIVTRNFFDNLVRALENDLADDE--GACSETSSGTPLSTDETERRP 177
           S+DF EFR KL  +T VTRN+F+NLVRALEN L+D +  G CS+TSS    S      R 
Sbjct: 91  SKDFNEFRTKLAGLTSVTRNYFENLVRALENGLSDVDSLGTCSKTSS----SKSTGGCRS 146

Query: 178 SGGAATMVAAR 210
            GG   M A R
Sbjct: 147 KGGKGKMSAFR 157


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