BLASTX nr result

ID: Cimicifuga21_contig00016324 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00016324
         (1262 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002283504.2| PREDICTED: uncharacterized protein LOC100260...   317   3e-84
ref|XP_003635376.1| PREDICTED: uncharacterized protein LOC100853...   268   2e-69
emb|CAN62265.1| hypothetical protein VITISV_018459 [Vitis vinifera]   268   2e-69
emb|CBI19365.3| unnamed protein product [Vitis vinifera]              264   4e-68
ref|XP_002535466.1| conserved hypothetical protein [Ricinus comm...   254   3e-65

>ref|XP_002283504.2| PREDICTED: uncharacterized protein LOC100260890 [Vitis vinifera]
          Length = 604

 Score =  317 bits (813), Expect = 3e-84
 Identities = 177/339 (52%), Positives = 225/339 (66%), Gaps = 5/339 (1%)
 Frame = +3

Query: 3    RKPVEGQTGHAAAGPATT--KVIP-TTSSQALVASGSGASNSLNVTHHQVKSLS-GAADP 170
            RKPVEGQTGH+  GP TT  K++P T+SS A V  G G SNSL + HHQ+K+L  GA++P
Sbjct: 258  RKPVEGQTGHSVPGPTTTATKLMPITSSSSASVVPGGGTSNSLAIAHHQIKNLHPGASNP 317

Query: 171  SSNSHLNRVSLSNGGAGGRLHDSQNLSMLSPAVNMKSKDNPFSTLKQRIPCEVSSRTDFG 350
            S+ + +NR+ L+    G R+ ++Q LS+LS  ++ KSK+N FS  KQ+IP E SSR  FG
Sbjct: 318  SAATPINRIFLNKENVGERMQETQGLSILSSTIDQKSKENQFSLPKQQIPYEESSRAGFG 377

Query: 351  LVSSDSLLNTSQRSTYIDYRNFGTSPDLNSQEPRAQDPLRHFMDEWPKNRSDSSTIGWPE 530
            LV S+SLL+ S  S++++ RNFG+S DLN+ EP +Q  LRHF+D+WPKN+SD + I WP+
Sbjct: 378  LVPSNSLLSKS--SSFMNCRNFGSSQDLNNHEPDSQHSLRHFIDDWPKNQSDRTAISWPD 435

Query: 531  VEETQSDRTQLXXXXXXXXXXXXXXXXX-THEKLTLSPLRLLSREFDPVQMGLGVGSFPN 707
            ++  QSDRTQL                  T++KLTLSPLRL SREFDP+QMGLGVGS  N
Sbjct: 436  ID-LQSDRTQLSISIPMASSDFMSSTSSPTNDKLTLSPLRL-SREFDPIQMGLGVGSVLN 493

Query: 708  EPTQRQASWIPISWESSMGGPLGEVLXXXXXXXXXXXXXXSPLNLMTEGWDSGLQMELSP 887
            EP QRQA+WIPISWE+SMGGPLGEVL              S LNLMTEGWD   ++  SP
Sbjct: 494  EPNQRQANWIPISWETSMGGPLGEVL-HSTNNNGGDCKNSSALNLMTEGWDGSPRLGSSP 552

Query: 888  TGVLQKXXXXXXXXXXXXXXPRAETNNNRDGGSLCDNML 1004
            TGVLQK              PRA      DG SLC+++L
Sbjct: 553  TGVLQKTSFGSLSNSSAGSSPRAGNKKTNDGASLCNDLL 591


>ref|XP_003635376.1| PREDICTED: uncharacterized protein LOC100853530 [Vitis vinifera]
          Length = 597

 Score =  268 bits (686), Expect = 2e-69
 Identities = 161/337 (47%), Positives = 200/337 (59%), Gaps = 3/337 (0%)
 Frame = +3

Query: 3    RKPVEGQTGHAAAGPATTKVIPTTSSQ-ALVASGSGASNSLNVTHHQVKSLSG-AADPSS 176
            RKPVEGQTGHA +GP  +KV+P  S+  A V S  GASNSL +  +Q KSL   AA+PS+
Sbjct: 263  RKPVEGQTGHAVSGPTNSKVVPMPSTMSASVMSSGGASNSLAIAQNQFKSLQPVAANPSA 322

Query: 177  NSHLNRVSLSNGGAGGRLHDSQNLSMLSPAVNMKSKDNPFSTLKQRIPCEVSSRTDFGLV 356
            ++ +NR           L + Q LSM+SP V++KS+D PFS  K  IP E S +++FG V
Sbjct: 323  DTLVNR-----------LQEPQGLSMISPTVDLKSRDTPFSISKLPIPFEESPQSEFGFV 371

Query: 357  SSDSLLNTSQRSTYIDYRNFGTSPDLNSQEPRAQDPLRHFMDEWPKNRSDSSTIGWPEVE 536
            SSDSLLN S+R +Y++ RN+    D + QE + Q P R F+D+WPK++S+ S I WP  E
Sbjct: 372  SSDSLLNPSERGSYMNSRNYTPFLDFSDQETQDQHPFRQFIDDWPKDQSNRSDIAWP--E 429

Query: 537  ETQSDRTQL-XXXXXXXXXXXXXXXXXTHEKLTLSPLRLLSREFDPVQMGLGVGSFPNEP 713
            E +SD TQL                  T EKL  SPLR LSRE DPVQMGLGV S  + P
Sbjct: 430  ELKSDWTQLSISIPMSSSDFSSSSSSPTQEKLAFSPLR-LSRELDPVQMGLGVSSDLSAP 488

Query: 714  TQRQASWIPISWESSMGGPLGEVLXXXXXXXXXXXXXXSPLNLMTEGWDSGLQMELSPTG 893
            TQ+Q +WIPISW SSMGGPLGEVL              S LNLMTEGWD   Q+  SPTG
Sbjct: 489  TQKQTNWIPISWGSSMGGPLGEVL-TTSANNMGACKNSSALNLMTEGWDGSPQIGSSPTG 547

Query: 894  VLQKXXXXXXXXXXXXXXPRAETNNNRDGGSLCDNML 1004
            VLQK              P  E     +  S C++ML
Sbjct: 548  VLQKATFGSLSNSSSGSSPTTENKKIHERASHCEDML 584


>emb|CAN62265.1| hypothetical protein VITISV_018459 [Vitis vinifera]
          Length = 497

 Score =  268 bits (685), Expect = 2e-69
 Identities = 160/337 (47%), Positives = 200/337 (59%), Gaps = 3/337 (0%)
 Frame = +3

Query: 3    RKPVEGQTGHAAAGPATTKVIPTTSSQ-ALVASGSGASNSLNVTHHQVKSLSG-AADPSS 176
            RKPVEGQTGHA +GP  +KV+P  S+  A V S  GASNSL +  +Q KSL   AA+PS+
Sbjct: 163  RKPVEGQTGHAVSGPTNSKVVPMPSTMSASVMSSGGASNSLAIAQNQFKSLQPVAANPSA 222

Query: 177  NSHLNRVSLSNGGAGGRLHDSQNLSMLSPAVNMKSKDNPFSTLKQRIPCEVSSRTDFGLV 356
            ++ +NR           L + Q LSM+SP +++KS+D PFS  K  IP E S +++FG V
Sbjct: 223  DTLVNR-----------LQEPQGLSMISPTIDLKSRDTPFSISKLPIPFEESPQSEFGFV 271

Query: 357  SSDSLLNTSQRSTYIDYRNFGTSPDLNSQEPRAQDPLRHFMDEWPKNRSDSSTIGWPEVE 536
            SSDSLLN S+R +Y++ RN+    D + QE + Q P R F+D+WPK++S+ S I WP  E
Sbjct: 272  SSDSLLNPSERGSYMNSRNYTPFLDFSDQETQDQHPFRQFIDDWPKDQSNRSDIAWP--E 329

Query: 537  ETQSDRTQL-XXXXXXXXXXXXXXXXXTHEKLTLSPLRLLSREFDPVQMGLGVGSFPNEP 713
            E +SD TQL                  T EKL  SPLR LSRE DPVQMGLGV S  + P
Sbjct: 330  ELKSDWTQLSISIPMSSSDFSSSSSSPTQEKLAFSPLR-LSRELDPVQMGLGVSSDLSAP 388

Query: 714  TQRQASWIPISWESSMGGPLGEVLXXXXXXXXXXXXXXSPLNLMTEGWDSGLQMELSPTG 893
            TQ+Q +WIPISW SSMGGPLGEVL              S LNLMTEGWD   Q+  SPTG
Sbjct: 389  TQKQTNWIPISWGSSMGGPLGEVL-TTSANNMGACKNSSALNLMTEGWDGSPQIGSSPTG 447

Query: 894  VLQKXXXXXXXXXXXXXXPRAETNNNRDGGSLCDNML 1004
            VLQK              P  E     +  S C++ML
Sbjct: 448  VLQKATFGSLSNSSSGSSPTTENKKIHERASHCEDML 484


>emb|CBI19365.3| unnamed protein product [Vitis vinifera]
          Length = 475

 Score =  264 bits (674), Expect = 4e-68
 Identities = 156/338 (46%), Positives = 199/338 (58%), Gaps = 4/338 (1%)
 Frame = +3

Query: 3    RKPVEGQTGHAAAGPATT--KVIP-TTSSQALVASGSGASNSLNVTHHQVKSLS-GAADP 170
            RKPVEGQTGH+  GP TT  K++P T+SS A V  G G SNSL + HHQ+K+L  GA++P
Sbjct: 167  RKPVEGQTGHSVPGPTTTATKLMPITSSSSASVVPGGGTSNSLAIAHHQIKNLHPGASNP 226

Query: 171  SSNSHLNRVSLSNGGAGGRLHDSQNLSMLSPAVNMKSKDNPFSTLKQRIPCEVSSRTDFG 350
            S+ + +NR+ L+    G R+ ++Q LS+LS  ++ KSK+N FS  KQ+IP E SSR  FG
Sbjct: 227  SAATPINRIFLNKENVGERMQETQGLSILSSTIDQKSKENQFSLPKQQIPYEESSRAGFG 286

Query: 351  LVSSDSLLNTSQRSTYIDYRNFGTSPDLNSQEPRAQDPLRHFMDEWPKNRSDSSTIGWPE 530
            LV S+SLL+ S  S++++ RNF                     D+WPKN+SD + I WP+
Sbjct: 287  LVPSNSLLSKS--SSFMNCRNF---------------------DDWPKNQSDRTAISWPD 323

Query: 531  VEETQSDRTQLXXXXXXXXXXXXXXXXXTHEKLTLSPLRLLSREFDPVQMGLGVGSFPNE 710
            ++  QSDRTQL                            +LSREFDP+QMGLGVGS  NE
Sbjct: 324  ID-LQSDRTQLSISIPMASSDF-----------------ILSREFDPIQMGLGVGSVLNE 365

Query: 711  PTQRQASWIPISWESSMGGPLGEVLXXXXXXXXXXXXXXSPLNLMTEGWDSGLQMELSPT 890
            P QRQA+WIPISWE+SMGGPLGEVL              S LNLMTEGWD   ++  SPT
Sbjct: 366  PNQRQANWIPISWETSMGGPLGEVL-HSTNNNGGDCKNSSALNLMTEGWDGSPRLGSSPT 424

Query: 891  GVLQKXXXXXXXXXXXXXXPRAETNNNRDGGSLCDNML 1004
            GVLQK              PRA      DG SLC+++L
Sbjct: 425  GVLQKTSFGSLSNSSAGSSPRAGNKKTNDGASLCNDLL 462


>ref|XP_002535466.1| conserved hypothetical protein [Ricinus communis]
            gi|223523019|gb|EEF26917.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 352

 Score =  254 bits (649), Expect = 3e-65
 Identities = 155/341 (45%), Positives = 200/341 (58%), Gaps = 7/341 (2%)
 Frame = +3

Query: 3    RKPVEGQTGHAAAGPATTKVIPTTSSQALVASGSGASNSLNVTHHQVKSLSGAADPSSN- 179
            RKPVEGQ+ H+AA   T      +SS +L AS  G   S  +   Q    +   D SSN 
Sbjct: 9    RKPVEGQSSHSAAAATTNAATTASSSSSLSASVVGLRGSGGIAERQQHFKNLQPDNSSNL 68

Query: 180  ---SHLNRVSLSNGGAGGRLHDSQNLSMLSPAVNMKSKDNPFSTLKQRIPCEVSSRTDFG 350
               + L+R+ L+    G RL DS  LSML+  V++KSK++PF   K+      SS+ +FG
Sbjct: 69   SAATSLSRIFLNKEKVGERLQDSPGLSMLTSQVDLKSKESPFLVSKE------SSQIEFG 122

Query: 351  LVSSDSLLNTSQRST-YIDYRNFGTSPDLNSQEPRAQDPLRHFMDEWPKNRSDSSTIGWP 527
            LV+SDSLLN SQ S+  I  RNFG+S DL  Q+  +Q  +R FMD+WPK++SD S + WP
Sbjct: 123  LVNSDSLLNPSQNSSPLISCRNFGSSQDLTDQDTVSQHSVRQFMDDWPKSQSDRSAVSWP 182

Query: 528  EVEETQSDRTQLXXXXXXXXXXXXXXXXXT--HEKLTLSPLRLLSREFDPVQMGLGVGSF 701
            +++  QSDRTQL                 +  +EK+TLSPLRL SR+ DP+QMGLGVGS 
Sbjct: 183  QLD-VQSDRTQLSISIPIGHHADYMSSTSSPNNEKVTLSPLRL-SRDLDPIQMGLGVGSV 240

Query: 702  PNEPTQRQASWIPISWESSMGGPLGEVLXXXXXXXXXXXXXXSPLNLMTEGWDSGLQMEL 881
             N+  QRQA+WIPISWE+S+GGPLGEVL              S LNLMTEGWDS  Q+  
Sbjct: 241  INDQNQRQANWIPISWETSIGGPLGEVL--HNTSNSAECKSSSALNLMTEGWDSSPQVGS 298

Query: 882  SPTGVLQKXXXXXXXXXXXXXXPRAETNNNRDGGSLCDNML 1004
            SPTGVLQK              PRAE     +G  +C ++L
Sbjct: 299  SPTGVLQKTTFASLSNSSGGSSPRAENIKTSEGPRMCTDLL 339


Top