BLASTX nr result

ID: Cimicifuga21_contig00016273 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00016273
         (1352 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002284235.1| PREDICTED: uncharacterized protein LOC100257...   281   3e-73
emb|CBI29820.3| unnamed protein product [Vitis vinifera]              280   5e-73
ref|XP_002533439.1| conserved hypothetical protein [Ricinus comm...   260   7e-67
ref|XP_003535869.1| PREDICTED: uncharacterized protein LOC100775...   255   2e-65
ref|XP_003518131.1| PREDICTED: uncharacterized protein LOC100792...   252   2e-64

>ref|XP_002284235.1| PREDICTED: uncharacterized protein LOC100257201 [Vitis vinifera]
          Length = 262

 Score =  281 bits (719), Expect = 3e-73
 Identities = 151/266 (56%), Positives = 195/266 (73%), Gaps = 2/266 (0%)
 Frame = -3

Query: 1128 MNLEQLSLYRXXXXXXXXXXXXXXXNYIRSSPHYLDSKEVSDKPLVQKYRVISLTHWYKT 949
            M  EQL+L+R                Y RSS    +S ++SDK LV +    +     +T
Sbjct: 1    MKQEQLTLHRSSSSCRSTRKILPST-YTRSSS---ESGDISDKLLVPRDSSPAFPRLART 56

Query: 948  HNVVD-MIRSFIGLVSFSSLVPACRSLSNPSRMLASPGLGRKVTGTLYGCKKGYVSFAVQ 772
             N +  ++RS +G++SF +++P CR LS P+ +  +P LGRKVTGTL+G ++G+VSFAVQ
Sbjct: 57   RNSISALLRSLLGVISFPTIIPTCRWLSIPNHLSITPSLGRKVTGTLFGHRRGHVSFAVQ 116

Query: 771  EDGRSEPVFLVELATSTSTLVKEMSSGLVRLALECEKGSGVGRHLKLLQEPTWTMYCNGK 592
            +D RSEPV L+ELATSTSTLVKEMSSGLVR+ALECEK +  GR +KL QEP WTMYCNG+
Sbjct: 117  DDPRSEPVLLLELATSTSTLVKEMSSGLVRIALECEKVAARGRPVKLFQEPMWTMYCNGR 176

Query: 591  RCGNAVSRTCVESDWYLLSTVQTVSAGAGVIPMDKSLNA-NGMDSEIMYMRARFERVVGN 415
            +CG A+SR C E D ++LSTVQ+VSAGAGVIP D +  +  G++ E++YMRARFERVVG+
Sbjct: 177  KCGYAMSRECGEFDRHVLSTVQSVSAGAGVIPTDDNRKSIVGVEGEMLYMRARFERVVGS 236

Query: 414  RHSQAYYMMNPDGNGGPELSIFLLRI 337
            R S+A+YMMNPDG GGPELSIFLLRI
Sbjct: 237  RDSEAFYMMNPDGTGGPELSIFLLRI 262


>emb|CBI29820.3| unnamed protein product [Vitis vinifera]
          Length = 279

 Score =  280 bits (717), Expect = 5e-73
 Identities = 145/240 (60%), Positives = 187/240 (77%), Gaps = 2/240 (0%)
 Frame = -3

Query: 1050 YIRSSPHYLDSKEVSDKPLVQKYRVISLTHWYKTHNVVD-MIRSFIGLVSFSSLVPACRS 874
            Y RSS    +S ++SDK LV +    +     +T N +  ++RS +G++SF +++P CR 
Sbjct: 43   YTRSSS---ESGDISDKLLVPRDSSPAFPRLARTRNSISALLRSLLGVISFPTIIPTCRW 99

Query: 873  LSNPSRMLASPGLGRKVTGTLYGCKKGYVSFAVQEDGRSEPVFLVELATSTSTLVKEMSS 694
            LS P+ +  +P LGRKVTGTL+G ++G+VSFAVQ+D RSEPV L+ELATSTSTLVKEMSS
Sbjct: 100  LSIPNHLSITPSLGRKVTGTLFGHRRGHVSFAVQDDPRSEPVLLLELATSTSTLVKEMSS 159

Query: 693  GLVRLALECEKGSGVGRHLKLLQEPTWTMYCNGKRCGNAVSRTCVESDWYLLSTVQTVSA 514
            GLVR+ALECEK +  GR +KL QEP WTMYCNG++CG A+SR C E D ++LSTVQ+VSA
Sbjct: 160  GLVRIALECEKVAARGRPVKLFQEPMWTMYCNGRKCGYAMSRECGEFDRHVLSTVQSVSA 219

Query: 513  GAGVIPMDKSLNA-NGMDSEIMYMRARFERVVGNRHSQAYYMMNPDGNGGPELSIFLLRI 337
            GAGVIP D +  +  G++ E++YMRARFERVVG+R S+A+YMMNPDG GGPELSIFLLRI
Sbjct: 220  GAGVIPTDDNRKSIVGVEGEMLYMRARFERVVGSRDSEAFYMMNPDGTGGPELSIFLLRI 279


>ref|XP_002533439.1| conserved hypothetical protein [Ricinus communis]
            gi|223526713|gb|EEF28946.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 276

 Score =  260 bits (664), Expect = 7e-67
 Identities = 140/250 (56%), Positives = 185/250 (74%), Gaps = 12/250 (4%)
 Frame = -3

Query: 1050 YIRSS----PHYLDSKEVSDKPLVQKYR--VISLTHWYKTHN-VVDMIRSFIGLVSFSSL 892
            Y+RS+    P   + +++SDK L+++     +SL    K H+    ++RS   +V+F ++
Sbjct: 27   YMRSTSTPHPTVPEREDISDKLLLRRDSPAAVSLQRLNKLHSRFSSLLRSIFKIVAFPNI 86

Query: 891  V-PACRSLSNPSRMLASPGLGRKVTGTLYGCKKGYVSFAVQEDGRSEPVFLVELATSTST 715
            + P C+ LS P+ +     LGRKVTGTL+G ++G+VSFAVQ+D RSEPV L+ELA STST
Sbjct: 87   IIPTCKWLSIPTHLSIKSSLGRKVTGTLFGHRRGHVSFAVQDDPRSEPVLLLELAMSTST 146

Query: 714  LVKEMSSGLVRLALECEK---GSGVGRHLKLLQEPTWTMYCNGKRCGNAVSRTCVESDWY 544
            LVKEMSSGLVR+ALEC+K    +   R  KL  EPTWTMYCNG++CG AVSRTC E DW+
Sbjct: 147  LVKEMSSGLVRIALECDKVQVPTNGTRSGKLFNEPTWTMYCNGRKCGYAVSRTCTELDWH 206

Query: 543  LLSTVQTVSAGAGVIPMDKSLNAN-GMDSEIMYMRARFERVVGNRHSQAYYMMNPDGNGG 367
            +L+TVQ+VS GAGVIPM +    N G + E++YMRA+FERVVG+R S+A+YMMNP+GNGG
Sbjct: 207  VLNTVQSVSVGAGVIPMVEDGRKNAGSEGELLYMRAKFERVVGSRDSEAFYMMNPEGNGG 266

Query: 366  PELSIFLLRI 337
            PELSIFLLRI
Sbjct: 267  PELSIFLLRI 276


>ref|XP_003535869.1| PREDICTED: uncharacterized protein LOC100775417 [Glycine max]
          Length = 296

 Score =  255 bits (651), Expect = 2e-65
 Identities = 134/257 (52%), Positives = 184/257 (71%), Gaps = 28/257 (10%)
 Frame = -3

Query: 1023 DSKEVSDKPLVQKYRVISLTHWYKT----------HNVVDMIRSFIGLVSFSSLVPACRS 874
            +S +VSD  LV++    S+++ Y+           + +  +IRSF+ + +F +++P C+ 
Sbjct: 40   ESDDVSDNLLVRRGSSPSVSNLYQQQQHTPKLTQQNKISSLIRSFLNIFTFPTMIPTCKW 99

Query: 873  LSNPSRMLASPGLGRKVTGTLYGCKKGYVSFAVQEDGRSEPVFLVELATSTSTLVKEMSS 694
            L+ PS++  +P LGRKVTGTL+G ++G++SFAVQ   R++PV L+ELA STS+LVKEMSS
Sbjct: 100  LTIPSQLSVTPSLGRKVTGTLFGHRRGHISFAVQLHPRADPVLLLELAMSTSSLVKEMSS 159

Query: 693  GLVRLALECEK------------GSGVGRHLKLLQEPTWTMYCNGKRCGNAVSRTCVESD 550
            GLVR+ALE +K             SG  +  KL QEP+WTMYCNG+ CG AVSRTC + D
Sbjct: 160  GLVRIALESQKLSASTITRTMRSNSGRQQQCKLFQEPSWTMYCNGRNCGYAVSRTCGDLD 219

Query: 549  WYLLSTVQTVSAGAGVIPM---DKSLNA---NGMDSEIMYMRARFERVVGNRHSQAYYMM 388
            W++LST+Q+VS GAGVIP+    K+ +A    G + E+MYMRARFERVVG+R S+A+YM+
Sbjct: 220  WHVLSTIQSVSVGAGVIPLLEDGKAASAAAGGGSEGELMYMRARFERVVGSRDSEAFYML 279

Query: 387  NPDGNGGPELSIFLLRI 337
            NPDGNGGPELSIFLLRI
Sbjct: 280  NPDGNGGPELSIFLLRI 296


>ref|XP_003518131.1| PREDICTED: uncharacterized protein LOC100792802 [Glycine max]
          Length = 294

 Score =  252 bits (643), Expect = 2e-64
 Identities = 135/257 (52%), Positives = 180/257 (70%), Gaps = 28/257 (10%)
 Frame = -3

Query: 1023 DSKEVSDKPLVQKYRVISLTHWYKT-------------HNVVDMIRSFIGLVSFSSLVPA 883
            +S +VSDK LV++    S+++ Y+              + +  +IRSF+ + +F +++P 
Sbjct: 39   ESDDVSDKLLVRRGSSPSVSNLYQQQQQQHHAPKLTQQNKISSLIRSFLNIFTFPTMIPT 98

Query: 882  CRSLSNPSRMLASPGLGRKVTGTLYGCKKGYVSFAVQEDGRSEPVFLVELATSTSTLVKE 703
            C+ L+ PS++  +P LGRKVTGTL+G ++G++SFAVQ   R+EPV L+ELA STS+LVKE
Sbjct: 99   CKWLTIPSQLSVTPSLGRKVTGTLFGHRRGHISFAVQLHPRAEPVLLLELAMSTSSLVKE 158

Query: 702  MSSGLVRLALECEK----------GSGVGRHLKLLQEPTWTMYCNGKRCGNAVSRTCVES 553
            MSS LVR+ALEC+K           SG GR  +L QEP WTMYCNG+ CG AVSRTC + 
Sbjct: 159  MSSSLVRIALECQKVSVTAAVAHNNSGGGRR-RLFQEPAWTMYCNGRNCGYAVSRTCGDL 217

Query: 552  DWYLLSTVQTVSAGAGVIPM-----DKSLNANGMDSEIMYMRARFERVVGNRHSQAYYMM 388
            D ++LSTVQ+VS GAGVIP+            G + E+MYMRARFERVVG+R S+A+YM+
Sbjct: 218  DLHVLSTVQSVSVGAGVIPLLEDGKGGGSGNGGSEGELMYMRARFERVVGSRDSEAFYML 277

Query: 387  NPDGNGGPELSIFLLRI 337
            NPDGNGGPELSIFLLRI
Sbjct: 278  NPDGNGGPELSIFLLRI 294


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