BLASTX nr result
ID: Cimicifuga21_contig00016261
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Cimicifuga21_contig00016261 (219 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_001190433.1| PREDICTED: histone H4-like [Strongylocentrot... 64 2e-08 gb|AFY23222.1| histone H4.3 [Hematodinium sp. SG-2012] 62 4e-08 pdb|1P3O|B Chain B, Crystallographic Studies Of Nucleosome Core ... 62 5e-08 ref|XP_003972557.1| PREDICTED: histone H4-like [Takifugu rubripes] 62 5e-08 sp|P27996.2|H4_SOLST RecName: Full=Histone H4 gi|10339|emb|CAA38... 62 6e-08 >ref|XP_001190433.1| PREDICTED: histone H4-like [Strongylocentrotus purpuratus] Length = 103 Score = 63.5 bits (153), Expect = 2e-08 Identities = 37/74 (50%), Positives = 45/74 (60%), Gaps = 11/74 (14%) Frame = +3 Query: 3 LGKGGAKRHKKTIQDITKPAIGQKGLRGITKPAIKRLARCGGAKPISGLIY--------- 155 LGKGGAKRH+K ++D ++GITKPAI+RLAR GG K ISGLIY Sbjct: 11 LGKGGAKRHRKVLRD---------NIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKV 61 Query: 156 --KGEIDDTDTYCK 191 + I DT TYC+ Sbjct: 62 FLENVIRDTVTYCE 75 >gb|AFY23222.1| histone H4.3 [Hematodinium sp. SG-2012] Length = 206 Score = 62.4 bits (150), Expect = 4e-08 Identities = 34/74 (45%), Positives = 45/74 (60%), Gaps = 11/74 (14%) Frame = +3 Query: 3 LGKGGAKRHKKTIQDITKPAIGQKGLRGITKPAIKRLARCGGAKPISGLIY--------- 155 +GKGG KRH+K ++D ++G+TKPAI+RLAR GG K ISGLIY Sbjct: 114 IGKGGGKRHRKVLRD---------NIQGVTKPAIRRLARRGGVKRISGLIYEETRLVLRA 164 Query: 156 --KGEIDDTDTYCK 191 +G + DT TYC+ Sbjct: 165 FLEGVLRDTITYCE 178 >pdb|1P3O|B Chain B, Crystallographic Studies Of Nucleosome Core Particles Containing Histone 'sin' Mutants gi|46015170|pdb|1P3O|F Chain F, Crystallographic Studies Of Nucleosome Core Particles Containing Histone 'sin' Mutants Length = 102 Score = 62.0 bits (149), Expect = 5e-08 Identities = 32/52 (61%), Positives = 39/52 (75%) Frame = +3 Query: 3 LGKGGAKRHKKTIQDITKPAIGQKGLRGITKPAIKRLARCGGAKPISGLIYK 158 LGKGGAKRH+K ++D ++GITKPAI+RLAR GGAK ISGLIY+ Sbjct: 10 LGKGGAKRHRKVLRD---------NIQGITKPAIRRLARRGGAKRISGLIYE 52 >ref|XP_003972557.1| PREDICTED: histone H4-like [Takifugu rubripes] Length = 141 Score = 62.0 bits (149), Expect = 5e-08 Identities = 41/81 (50%), Positives = 47/81 (58%), Gaps = 29/81 (35%) Frame = +3 Query: 3 LGKGGAKRHKKTIQD----ITKPAI---------GQKGL----------------RGITK 95 LGKGGAKRH+K ++D ITKPAI G KGL +GITK Sbjct: 11 LGKGGAKRHRKVLRDNIQGITKPAIRLNMSGRGKGGKGLGKGGAKRHRKVLRDNIQGITK 70 Query: 96 PAIKRLARCGGAKPISGLIYK 158 PAI+RLAR GG K ISGLIY+ Sbjct: 71 PAIRRLARRGGVKRISGLIYE 91 >sp|P27996.2|H4_SOLST RecName: Full=Histone H4 gi|10339|emb|CAA38055.1| histone H4 [Solaster stimpsoni] Length = 103 Score = 61.6 bits (148), Expect = 6e-08 Identities = 36/74 (48%), Positives = 44/74 (59%), Gaps = 11/74 (14%) Frame = +3 Query: 3 LGKGGAKRHKKTIQDITKPAIGQKGLRGITKPAIKRLARCGGAKPISGLIY--------- 155 LGKGGAKRH+K ++D ++GITKPAI+RLAR GG K ISGLIY Sbjct: 11 LGKGGAKRHRKVLRD---------NIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKV 61 Query: 156 --KGEIDDTDTYCK 191 + I D TYC+ Sbjct: 62 FLENVIRDAVTYCE 75