BLASTX nr result

ID: Cimicifuga21_contig00016246 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00016246
         (790 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002528146.1| conserved hypothetical protein [Ricinus comm...   253   7e-79
ref|XP_002275625.1| PREDICTED: mitochondrial translocator assemb...   241   1e-76
ref|NP_001030827.1| uncharacterized protein [Arabidopsis thalian...   240   3e-74
ref|XP_002877570.1| hypothetical protein ARALYDRAFT_485127 [Arab...   238   8e-74
ref|XP_004166981.1| PREDICTED: mitochondrial translocator assemb...   237   1e-73

>ref|XP_002528146.1| conserved hypothetical protein [Ricinus communis]
           gi|223532444|gb|EEF34237.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 329

 Score =  253 bits (645), Expect(2) = 7e-79
 Identities = 118/160 (73%), Positives = 135/160 (84%)
 Frame = -3

Query: 485 RDHYASWMVHLGGAKLITQVADEIGVGVHFNPFVNWNDKMIKYGVVRMHDLVQDILHWEH 306
           RDHYASWMVHLGGAKLIT+VADEIGVGVHFNPF+ WNDKM+KYGVVRMHDLVQDIL+WE 
Sbjct: 61  RDHYASWMVHLGGAKLITEVADEIGVGVHFNPFITWNDKMLKYGVVRMHDLVQDILNWER 120

Query: 305 FYLSGRLQKPVNVIVDNLDIANLNLVNXXXXXXXXXXXLPPEFTEDELYAKICGLSYMGD 126
           FYLSGRLQKPV+++VDNLDI N+N  N           LP +FTE++LY+KIC LSYMGD
Sbjct: 121 FYLSGRLQKPVHILVDNLDIGNVNSANLRAALSAALLLLPSKFTEEDLYSKICSLSYMGD 180

Query: 125 LRMLFAEDKNKVNNIVQGQFHLFQKMYKPLLEEYAAKDCL 6
           LRMLFAEDKNKV  IVQGQF LF  MY+P+L++Y AK+ L
Sbjct: 181 LRMLFAEDKNKVKKIVQGQFGLFHSMYRPILQDYEAKELL 220



 Score = 68.2 bits (165), Expect(2) = 7e-79
 Identities = 32/45 (71%), Positives = 36/45 (80%), Gaps = 1/45 (2%)
 Frame = -2

Query: 615 DLLNDLPPVEFCCAYGSALL-GNHDKSTMVDYILGVSDPKQWHSE 484
           + L  LP VEFCC YGSAL   N DKS+MVD+ILGVSDP+QWHSE
Sbjct: 11  NFLEVLPSVEFCCVYGSALHPNNQDKSSMVDFILGVSDPRQWHSE 55


>ref|XP_002275625.1| PREDICTED: mitochondrial translocator assembly and maintenance
           protein 41 homolog [Vitis vinifera]
           gi|297738029|emb|CBI27230.3| unnamed protein product
           [Vitis vinifera]
          Length = 332

 Score =  241 bits (614), Expect(2) = 1e-76
 Identities = 121/160 (75%), Positives = 131/160 (81%)
 Frame = -3

Query: 485 RDHYASWMVHLGGAKLITQVADEIGVGVHFNPFVNWNDKMIKYGVVRMHDLVQDILHWEH 306
           RDHYAS MV+LGGAKLITQVADEIGVGVHFNPFV+ ND+M KYGVVRMHDLV+D+L+WE 
Sbjct: 61  RDHYASSMVYLGGAKLITQVADEIGVGVHFNPFVSVNDEMFKYGVVRMHDLVEDVLNWET 120

Query: 305 FYLSGRLQKPVNVIVDNLDIANLNLVNXXXXXXXXXXXLPPEFTEDELYAKICGLSYMGD 126
           FYLSGRLQKPV V+VDNLDI NLN VN           LP +FTE+ LYAKIC LSYMGD
Sbjct: 121 FYLSGRLQKPVQVLVDNLDIGNLNSVNLKGAISAALLLLPAKFTEEHLYAKICSLSYMGD 180

Query: 125 LRMLFAEDKNKVNNIVQGQFHLFQKMYKPLLEEYAAKDCL 6
           LRMLFAED+NKV  IVQ QF LFQ MYKPLLEEY AK  L
Sbjct: 181 LRMLFAEDRNKVKKIVQVQFDLFQTMYKPLLEEYGAKGLL 220



 Score = 72.4 bits (176), Expect(2) = 1e-76
 Identities = 34/46 (73%), Positives = 38/46 (82%), Gaps = 1/46 (2%)
 Frame = -2

Query: 618 SDLLNDLPPVEFCCAYGSALL-GNHDKSTMVDYILGVSDPKQWHSE 484
           + LL  LPPVEFCC YGSAL   N++KSTMVDYILGVSDP QWHS+
Sbjct: 10  ASLLKFLPPVEFCCVYGSALHPNNYNKSTMVDYILGVSDPMQWHSQ 55


>ref|NP_001030827.1| uncharacterized protein [Arabidopsis thaliana]
           gi|6522546|emb|CAB61989.1| putative protein [Arabidopsis
           thaliana] gi|44681360|gb|AAS47620.1| At3g47630
           [Arabidopsis thaliana] gi|56381935|gb|AAV85686.1|
           At3g47630 [Arabidopsis thaliana]
           gi|110738628|dbj|BAF01239.1| hypothetical protein
           [Arabidopsis thaliana] gi|332644789|gb|AEE78310.1|
           uncharacterized protein [Arabidopsis thaliana]
          Length = 332

 Score =  240 bits (612), Expect(2) = 3e-74
 Identities = 114/159 (71%), Positives = 130/159 (81%)
 Frame = -3

Query: 482 DHYASWMVHLGGAKLITQVADEIGVGVHFNPFVNWNDKMIKYGVVRMHDLVQDILHWEHF 303
           DHYASWMVHLGGA+LIT VAD++GVGVHFNPFVNWND+ +KYGVVRMHDLVQDIL W+ F
Sbjct: 62  DHYASWMVHLGGARLITNVADKVGVGVHFNPFVNWNDRKLKYGVVRMHDLVQDILDWKRF 121

Query: 302 YLSGRLQKPVNVIVDNLDIANLNLVNXXXXXXXXXXXLPPEFTEDELYAKICGLSYMGDL 123
           YLSGRLQKPV+++VDNLDI ++N VN           LP +FTE++LYAKIC LSYMGDL
Sbjct: 122 YLSGRLQKPVHMLVDNLDIEDVNSVNKRAAISAALLLLPSKFTEEDLYAKICSLSYMGDL 181

Query: 122 RMLFAEDKNKVNNIVQGQFHLFQKMYKPLLEEYAAKDCL 6
           RM FAED NKVN IV+GQF LFQ MYKP LEE   K+ L
Sbjct: 182 RMFFAEDTNKVNKIVKGQFDLFQSMYKPFLEECETKNLL 220



 Score = 65.5 bits (158), Expect(2) = 3e-74
 Identities = 31/45 (68%), Positives = 34/45 (75%), Gaps = 1/45 (2%)
 Frame = -2

Query: 618 SDLLNDLPPVEFCCAYGSALL-GNHDKSTMVDYILGVSDPKQWHS 487
           S  L+ LPPV+FCC YGS L   N DKS MVDYILGVSDP +WHS
Sbjct: 10  SSFLSVLPPVDFCCVYGSTLHPNNQDKSKMVDYILGVSDPIKWHS 54


>ref|XP_002877570.1| hypothetical protein ARALYDRAFT_485127 [Arabidopsis lyrata subsp.
           lyrata] gi|297323408|gb|EFH53829.1| hypothetical protein
           ARALYDRAFT_485127 [Arabidopsis lyrata subsp. lyrata]
          Length = 332

 Score =  238 bits (607), Expect(2) = 8e-74
 Identities = 112/159 (70%), Positives = 129/159 (81%)
 Frame = -3

Query: 482 DHYASWMVHLGGAKLITQVADEIGVGVHFNPFVNWNDKMIKYGVVRMHDLVQDILHWEHF 303
           DHYASWMVHLGGA+LIT VAD++GVGVHFNPFVNWND+ +KYGVVRMHDLVQDIL W  F
Sbjct: 62  DHYASWMVHLGGARLITNVADKVGVGVHFNPFVNWNDRKLKYGVVRMHDLVQDILDWNRF 121

Query: 302 YLSGRLQKPVNVIVDNLDIANLNLVNXXXXXXXXXXXLPPEFTEDELYAKICGLSYMGDL 123
           YLSGRLQKPV+++VDNLDI ++N VN           LP +FTE++LYAKIC LSYMGDL
Sbjct: 122 YLSGRLQKPVHMLVDNLDIEDVNSVNKRAAVSAALLLLPSKFTEEDLYAKICSLSYMGDL 181

Query: 122 RMLFAEDKNKVNNIVQGQFHLFQKMYKPLLEEYAAKDCL 6
           RM FAED NKVN IV+GQF +FQ MYKP +EE   K+ L
Sbjct: 182 RMFFAEDTNKVNKIVKGQFDIFQSMYKPFIEECETKNLL 220



 Score = 65.9 bits (159), Expect(2) = 8e-74
 Identities = 31/45 (68%), Positives = 33/45 (73%), Gaps = 1/45 (2%)
 Frame = -2

Query: 618 SDLLNDLPPVEFCCAYGSALL-GNHDKSTMVDYILGVSDPKQWHS 487
           S  L  LPPV+FCC YGS L   N DKS MVDYILGVSDP +WHS
Sbjct: 10  SSFLGVLPPVDFCCVYGSTLHPNNQDKSKMVDYILGVSDPMKWHS 54


>ref|XP_004166981.1| PREDICTED: mitochondrial translocator assembly and maintenance
           protein 41 homolog [Cucumis sativus]
          Length = 335

 Score =  237 bits (604), Expect(2) = 1e-73
 Identities = 110/160 (68%), Positives = 131/160 (81%)
 Frame = -3

Query: 485 RDHYASWMVHLGGAKLITQVADEIGVGVHFNPFVNWNDKMIKYGVVRMHDLVQDILHWEH 306
           +DHYASWMV+LGG KL+T+VAD IGVGVHFNP+V WNDKM+KYGV RMHDL+QDI +W+ 
Sbjct: 61  KDHYASWMVYLGGGKLVTKVADAIGVGVHFNPYVMWNDKMLKYGVARMHDLIQDIQYWKT 120

Query: 305 FYLSGRLQKPVNVIVDNLDIANLNLVNXXXXXXXXXXXLPPEFTEDELYAKICGLSYMGD 126
           FYLSGRLQKPVN++VD+LD+  LN VN           LPP+FTE +LYAKIC LSYMGD
Sbjct: 121 FYLSGRLQKPVNILVDSLDVQQLNSVNLRSAVSAALLLLPPKFTEVDLYAKICSLSYMGD 180

Query: 125 LRMLFAEDKNKVNNIVQGQFHLFQKMYKPLLEEYAAKDCL 6
           LRMLFAED++KVN IV+GQF LFQ MY+P LE+Y  K+ L
Sbjct: 181 LRMLFAEDRDKVNKIVRGQFPLFQSMYRPCLEQYKTKELL 220



 Score = 66.6 bits (161), Expect(2) = 1e-73
 Identities = 30/43 (69%), Positives = 34/43 (79%), Gaps = 1/43 (2%)
 Frame = -2

Query: 609 LNDLPPVEFCCAYGSALL-GNHDKSTMVDYILGVSDPKQWHSE 484
           L +LPPVEFCC YGS L   NHDKS MVD ILGVSDP++WH +
Sbjct: 13  LKELPPVEFCCIYGSTLHPNNHDKSKMVDLILGVSDPQKWHEK 55


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