BLASTX nr result

ID: Cimicifuga21_contig00016245 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00016245
         (912 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN79321.1| hypothetical protein VITISV_018984 [Vitis vinifera]    73   2e-13
emb|CAN71692.1| hypothetical protein VITISV_015629 [Vitis vinifera]    70   3e-13
emb|CAN64427.1| hypothetical protein VITISV_029384 [Vitis vinifera]    65   4e-11
gb|ABD63193.1| gag-pol polyprotein, putative [Asparagus officina...    64   2e-08
emb|CAN69087.1| hypothetical protein VITISV_031061 [Vitis vinifera]    62   2e-07

>emb|CAN79321.1| hypothetical protein VITISV_018984 [Vitis vinifera]
          Length = 1521

 Score = 73.2 bits (178), Expect(2) = 2e-13
 Identities = 39/71 (54%), Positives = 52/71 (73%), Gaps = 1/71 (1%)
 Frame = -3

Query: 283  VQAFRHWRHYLIHREY-LFKFGQALRYLNSQEKVVDRHNRWFSSFL*GFSVHL*HHPGKE 107
            VQA RHW+HYL ++E+ L+   +ALRYLNSQ+K+  RH +W SSFL  F+ +L H  G E
Sbjct: 965  VQAIRHWQHYLSYKEFVLYSDHEALRYLNSQKKLNSRHAKW-SSFLQLFTFNLKHCAGIE 1023

Query: 106  NKLADPLRRRA 74
            NK+AD L R+A
Sbjct: 1024 NKVADALSRKA 1034



 Score = 29.3 bits (64), Expect(2) = 2e-13
 Identities = 17/35 (48%), Positives = 20/35 (57%)
 Frame = -2

Query: 407  DFDKLFEV*SAACLTGLGVDLSQNGWLVALH*EAL 303
            DF+K+FEV   A   G+G  LSQ G  VA   E L
Sbjct: 913  DFEKVFEVACDASHVGIGAVLSQEGHPVAFFSEKL 947


>emb|CAN71692.1| hypothetical protein VITISV_015629 [Vitis vinifera]
          Length = 372

 Score = 69.7 bits (169), Expect(2) = 3e-13
 Identities = 37/68 (54%), Positives = 50/68 (73%), Gaps = 1/68 (1%)
 Frame = -3

Query: 283 VQAFRHWRHYLIHRE-YLFKFGQALRYLNSQEKVVDRHNRWFSSFL*GFSVHL*HHPGKE 107
           VQA RHW+HYL ++E +L+   +AL+YLNSQ+K+  RH +W SSFL  F+ +L H  G E
Sbjct: 291 VQAIRHWQHYLSYKEFFLYSDHEALQYLNSQKKLNSRHAKW-SSFLQLFTFNLKHCAGIE 349

Query: 106 NKLADPLR 83
           NK+AD LR
Sbjct: 350 NKVADALR 357



 Score = 32.0 bits (71), Expect(2) = 3e-13
 Identities = 18/35 (51%), Positives = 21/35 (60%)
 Frame = -2

Query: 407 DFDKLFEV*SAACLTGLGVDLSQNGWLVALH*EAL 303
           DF+K+FEV   A   G+G  LSQ G LVA   E L
Sbjct: 239 DFEKVFEVACDASHVGIGAVLSQEGHLVAFFSEKL 273


>emb|CAN64427.1| hypothetical protein VITISV_029384 [Vitis vinifera]
          Length = 1392

 Score = 65.1 bits (157), Expect(2) = 4e-11
 Identities = 34/65 (52%), Positives = 47/65 (72%), Gaps = 1/65 (1%)
 Frame = -3

Query: 283  VQAFRHWRHYLIHREY-LFKFGQALRYLNSQEKVVDRHNRWFSSFL*GFSVHL*HHPGKE 107
            VQA RHW+HYL ++E+ L+   +ALRYLNSQ+K+  RH +W SSFL  F+ +L H  G E
Sbjct: 890  VQAIRHWQHYLSYKEFVLYSDHEALRYLNSQKKLNSRHAKW-SSFLQLFTFNLXHCAGIE 948

Query: 106  NKLAD 92
            NK+ +
Sbjct: 949  NKILE 953



 Score = 29.3 bits (64), Expect(2) = 4e-11
 Identities = 17/35 (48%), Positives = 20/35 (57%)
 Frame = -2

Query: 407 DFDKLFEV*SAACLTGLGVDLSQNGWLVALH*EAL 303
           DF+K+FEV   A   G+G  LSQ G  VA   E L
Sbjct: 838 DFEKVFEVACDASHVGIGAVLSQEGHPVAFFSEKL 872


>gb|ABD63193.1| gag-pol polyprotein, putative [Asparagus officinalis]
          Length = 358

 Score = 63.5 bits (153), Expect(2) = 2e-08
 Identities = 34/69 (49%), Positives = 46/69 (66%), Gaps = 1/69 (1%)
 Frame = -3

Query: 283 VQAFRHWRHYLIHREY-LFKFGQALRYLNSQEKVVDRHNRWFSSFL*GFSVHL*HHPGKE 107
           VQ+ RHWRHYL+ +E+ ++   +ALRYLNSQ+K+  R  RW   FL  ++  L H  G E
Sbjct: 291 VQSLRHWRHYLLPQEFVIYSDHEALRYLNSQKKLNARRARWV-EFLQDYTYTLKHMAGVE 349

Query: 106 NKLADPLRR 80
           NK+AD L R
Sbjct: 350 NKVADALSR 358



 Score = 21.9 bits (45), Expect(2) = 2e-08
 Identities = 12/23 (52%), Positives = 14/23 (60%)
 Frame = -2

Query: 407 DFDKLFEV*SAACLTGLGVDLSQ 339
           DF K+FEV   A   G+G  LSQ
Sbjct: 239 DFSKVFEVACDASGIGIGGVLSQ 261


>emb|CAN69087.1| hypothetical protein VITISV_031061 [Vitis vinifera]
          Length = 611

 Score = 62.0 bits (149), Expect = 2e-07
 Identities = 38/95 (40%), Positives = 58/95 (61%), Gaps = 2/95 (2%)
 Frame = -3

Query: 283 VQAFRHWRHYLIHREY-LFKFGQALRYLNSQEKVVDRHNRWFSSFL*GFSVHL*HHPGKE 107
           VQA + WRHYLI RE+ L    +AL++LNSQ+K+  RH +W  ++L  ++  L +  G +
Sbjct: 344 VQALKFWRHYLIQREFILHSDHEALKFLNSQQKLNHRHAKWV-AYLQKYTFTLRYKAGSQ 402

Query: 106 NKLADPLRRRAHVPITLHFPISG*LA-KRLYPSDS 5
           N++AD L RR ++  T+   + G  A K  Y  DS
Sbjct: 403 NRVADALCRRVYLLQTMTNSVVGLEAIKEQYMKDS 437


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