BLASTX nr result

ID: Cimicifuga21_contig00016241 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cimicifuga21_contig00016241
         (1409 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002270752.1| PREDICTED: uncharacterized protein LOC100259...    88   5e-15
ref|XP_002524096.1| conserved hypothetical protein [Ricinus comm...    62   5e-07
ref|XP_004167873.1| PREDICTED: uncharacterized protein LOC101225...    60   1e-06

>ref|XP_002270752.1| PREDICTED: uncharacterized protein LOC100259819 [Vitis vinifera]
          Length = 151

 Score = 88.2 bits (217), Expect = 5e-15
 Identities = 55/153 (35%), Positives = 69/153 (45%), Gaps = 1/153 (0%)
 Frame = -2

Query: 898 MTRQIIIRKPSSNRRQPLLTKDQPPPTGNSRFGEXXXXXXXXXXXXXXXXXXXXXXXXXL 719
           MTRQI++R PS NRRQPLL       +G+ RF E                         L
Sbjct: 1   MTRQIVMRPPSLNRRQPLLASQSS--SGSIRFAEVAGETTAECAAVACCCPCGLVNLLVL 58

Query: 718 AVYKLPAGLCXXXXXXXXXXXLMNAEIF-PKRRTCACGCDETDYQIHPVPVELFXXXXXX 542
           AVYK+PAGLC           ++   +  P+RR C CGCD+T+ QIHP+  ++       
Sbjct: 59  AVYKVPAGLCRRALKKKRLRRMIKKGLLQPRRRRCPCGCDDTELQIHPISGDVTDADISV 118

Query: 541 XXXXXXXXXXXXXXXXXXKFYGTGFWRSPSQRE 443
                             KFY TGFWRS SQRE
Sbjct: 119 KSNESEQEVMDLEKEMWDKFYSTGFWRSSSQRE 151


>ref|XP_002524096.1| conserved hypothetical protein [Ricinus communis]
           gi|223536664|gb|EEF38306.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 252

 Score = 61.6 bits (148), Expect = 5e-07
 Identities = 37/100 (37%), Positives = 43/100 (43%), Gaps = 8/100 (8%)
 Frame = -2

Query: 718 AVYKLPAGLCXXXXXXXXXXXLMNAEIFPKR-RTCACGCDETDYQIHPVPVEL------- 563
           A+YK+PAGLC           LM   + P R + C CGCDET+ QIHP  + L       
Sbjct: 133 AIYKVPAGLCRRALRRKRRKQLMKEGLLPARTKRCRCGCDETEIQIHPEMIRLDEEETEN 192

Query: 562 FXXXXXXXXXXXXXXXXXXXXXXXXKFYGTGFWRSPSQRE 443
                                     FY TGFWRSPSQRE
Sbjct: 193 GDDDDNNVADEEDDAMVKLEKEMWETFYSTGFWRSPSQRE 232


>ref|XP_004167873.1| PREDICTED: uncharacterized protein LOC101225028 [Cucumis sativus]
          Length = 159

 Score = 60.5 bits (145), Expect = 1e-06
 Identities = 50/156 (32%), Positives = 61/156 (39%), Gaps = 3/156 (1%)
 Frame = -2

Query: 898 MTRQIIIRKPSSNRRQPLLTKDQPPPTGNSRFGEXXXXXXXXXXXXXXXXXXXXXXXXXL 719
           M+  I+ R PSSNRRQPLLT      +G+ RF E                         L
Sbjct: 1   MSNTIMFRPPSSNRRQPLLTSKS--ASGSVRFAEVAGGTTAECAAVCCCCPCVVINFLVL 58

Query: 718 AVYKLPAGLCXXXXXXXXXXXLMNAEIFPKR--RTCACGCDETDYQIHPVPVELF-XXXX 548
           A+YK+PAGLC           L    + P R  R    G DETD QI      ++     
Sbjct: 59  AIYKVPAGLCRRALRTKRRQRLKKKGVTPARRGRFSFGGYDETDIQILSAGKLVYSSEPR 118

Query: 547 XXXXXXXXXXXXXXXXXXXXKFYGTGFWRSPSQREQ 440
                                FY TGFWRSPS+R+Q
Sbjct: 119 GQQAVETERKVMELEKEMWEIFYSTGFWRSPSRRDQ 154


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